Top-down lignomics analysis of the French pine lignin by atmospheric pressure photoionization quadrupole time-of-flight tandem mass spectrometry: Identification of a novel series of lignin-carbohydrate complexes

Characterizing lignins from various sources and treatment processes after optimized sample preparation techniques and analysis via ESI-HRMS and custom mass defect software tools

Sample preparation of complex, natural mixtures such as lignin prior to mass spectrometry analysis, however minimal, is a critical step in ensuring accurate and interference-free results. Modern shotgun-MS techniques, where samples are directly injected into a high-resolution mass spectrometer (HRMS) with no prior separation, usually still require basic sample pretreatment such as filtration and appropriate solvents for full dissolution and compatibility with atmospheric pressure ionization interfaces. In this study, sample preparation protocols have been established for a unique sample set consisting of a wide variety of degraded lignin samples from numerous sources and treatment processes. The samples were analyzed via electrospray (ESI)-HRMS in negative and positive ionization modes. The resulting information-rich HRMS datasets were then transformed into the mass defect space with custom R scripts as well as the open-source Constellation software as an effective way to visualize changes between the samples due to the sample preparation and ionization conditions as well as a starting point for comprehensive characterization of these varied sample sets. Optimized conditions for the four investigated lignins are proposed for ESI-HRMS analysis for the first time, giving an excellent starting point for future studies seeking to better characterize and understand these complex mixtures.

Polyphenolic-protein-polysaccharide conjugates from Spica of Prunella vulgaris: Chemical profile and anti-herpes simplex virus activities

Previous studies showed that the water extract (PVW) from Spica of Prunella vulgaris Linn. (Labiatae) exerts anti-herpes simplex virus (HSV) activity. Evaluation the antiviral activity of the graded ethanol precipitations indicated that 30% ethanol precipitate (PVE30) was the active principle of water extract (PVW). Further activity-oriented separation of PVE30 through salting-out method revealed that the anti-HSV activity of P. vulgaris glycoconjugates (PVG) was more potent than PVE30 and PVW, 2-fold and 4-fold, respectively. UPLC-QTOF-MS/MS, FT-IR and NMR techniques identified PVG as a type of polyphenolic-protein-polysaccharides (PPPs) with an average molecular weight of 41.69 kDa. PVG was composed of dibenzylbutyrolactone lignan units, and rich in galacturonic acid, xylose, rhamnose, rhamnose, arabinose, glucose monosaccharide units, glutamic acid and aspartic acid. Further in vitro antiviral testing confirmed that PVG substantially and stably inhibited acyclovir (ACV) resistant HSV strains; its inhibitory action was even better than the positive control ACV. Overall, our findings support PVG as a potential drug resource for anti-HSV therapy.

Dopant-assisted atmospheric pressure photoionization Orbitrap mass spectrometry - An approach to molecular characterization of lignin oligomers

Lignin is the second most abundant biopolymer in nature and is considered an important renewable source of aromatic compounds. One of the most promising analytical methods for molecular characterization of lignin is Orbitrap high-resolution mass spectrometry with atmospheric pressure photoionization (APPI), proved itself in the study of lignins of various origins and their depolymerization products. In this work, the photoionization of lignin using acetone, 1,4-dioxane, and THF as solvents for the biopolymer and APPI dopants providing the generation of protonated and deprotonated molecules of lignin oligomers has been studied. The ionization conditions were optimized on the basis of the dependences of the total ion current on temperature and the flow rate of the solution into the ion source. Lignin degradation processes under APPI conditions occur mainly with the cleavage of ether β-O-4 bonds between phenylpropane structural units, demethylation (negative ion mode), as well as the loss of water and formaldehyde (positive ion mode). Negative ion mode APPI provides a higher ionization efficiency in the region of high molecular weights, however, it is characterized by an increased fragmentation of β-O-4 ether bonds compared to APPI(+) leading to a partial depolymerization of lignin in the ion source. The combination of APPI with Orbitrap high-resolution mass spectrometry allows obtaining mass spectra of coniferous and deciduous wood lignins with resolved fine structure and containing signals of up to 3000 oligomers in the mass range of 300-1800 Da. This can be used for comprehensive characterization of lignins at molecular level and tracking changes in biopolymer chemical composition in various processes.

Top-down lignomics analysis of the French oak lignin by atmospheric pressure photoionization and electrospray ionization quadrupole time-of-flight tandem mass spectrometry: Identification of a novel series of lignans

We report herein the top-down lignomic analysis of virgin released lignin (VRL) extracted from the French oak wood using atmospheric pressure photoionization quadrupole orthogonal time-of-flight mass spectrometry (APPI-QqTOF-MS) (+ ion mode). Eight major protonated lignin oligomers were identified using the APPI-QqTOF-MS/MS of this complex VRL mixture without any kind of purification. This series of protonated oligomer ions were identified as neolignan cedrusin (1), five different aryltetralin lignans dimers (2-6), one lignan-dehydroshikimic acid complex (7), and a lignan trimer (8). Similarly, electrospray ionization (ESI)-QqTOF-MS (+ ion mode) allowed us to identify three extra aryltetralin lignan derivatives (9-11). The Kendrick mass defect analysis was used for the simplification of this complex APPI-QqTOF-MS into a compositional map, which displayed clustering points of associated ions possessing analogous elemental composition. This series of novel protonated molecules were selected and subjected to low-energy collision-induced dissociation (CID)-MS/MS analyses. The obtained gas-phase fragmentation patterns helped to tentatively assign their most likely structures. Also, it was found that the use of different APPI and ESI ambient ionization techniques enhances the ionization of different types of lignin oligomers.