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Majumdar D, Philip JE, Gassoumi B, Ayachi S, Abdelaziz B, Tüzün B, Roy S. Supramolecular clumps of μ 2-1,3-acetate bridges of Cd(II)-Salen complex: Synthesis, spectroscopic characterization, crystal structure, DFT quantization's, and antifungal photodynamic therapy. Heliyon 2024; 10:e29856. [PMID: 38707382 PMCID: PMC11066650 DOI: 10.1016/j.heliyon.2024.e29856] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2024] [Revised: 04/11/2024] [Accepted: 04/16/2024] [Indexed: 05/07/2024] Open
Abstract
The article divulges the crystal growth, synthesis, and X-ray structure characterization of one centrosymmetric cadmium complex, [Cd{CdL(μ2-1,3-acetate)}2] using Salen ligand (SL). The complex is further characterized using spectroscopic and analytical techniques, including DRS, SEM-EDX, PXRD, and ICP-MS. The crystallographic study showed that the complex has a monoclinic space P21/c. Addison parameters (Ʈ) show the hexagonal geometry of the central Cd(II) metal ion. Hirshfeld surface and 2-D fingerprint confirm supramolecular contacts despite weak C-H⋯O and C-H···π interactions. Energy frameworks, FMOs, global reactivity parameters, MEP, and energy bandgap explain the complex reactivity outlook. The complex inter- and intramolecular bonding interactions were explored through natural bond orbital (NBO), QTAIM, NCI-RDG, Electron Location Function (ELF), and Localized Orbital Locator (LOL) quantization methods. In addition, the complex and its synthetic components in vitro antibacterial efficacy were investigated using Gram-positive and Gram-negative microbial strains. SAR (structure-activity relationship) correlates with biological potency. Molecular docking assessed antimicrobial potency with proteins S. aureus (PDB ID: 1JIJ), C. albicans (PDB ID: 1M7A), E. coli (PDB ID: 1T9U), P. aeruginosa (PDB ID: 2UV0), and A. Niger (PDB ID: 3K4P). The findings are backed by the Protein-Ligand Interaction Profiler (PLIP). The antifungal potency and cell viability test of C. albicans were conducted using photodynamic therapy (APDT).
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Affiliation(s)
- Dhrubajyoti Majumdar
- Department of Chemistry, Tamralipta Mahavidyalaya, Tamluk, 721636, West Bengal, India
| | | | - Bouzid Gassoumi
- Laboratory of Advanced Materials and Interfaces (LIMA), University of Monastir, Faculty of Sciences of Monastir, Avenue of Environment, 5000, Monastir, Tunisia
| | - Sahbi Ayachi
- Laboratory of Physico-Chemistry of Materials (LR01ES19), Faculty of Sciences, Avenue of the Environment 5019 Monastir, University of Monastir, Tunisia
| | - Balkis Abdelaziz
- Laboratory of Physico-Chemistry of Materials (LR01ES19), Faculty of Sciences, Avenue of the Environment 5019 Monastir, University of Monastir, Tunisia
| | - Burak Tüzün
- Sivas Cumhuriyet University, Sivas Vocational School, Department of Plant and Animal Production, TR-58140, Sivas, Turkey
| | - Sourav Roy
- Solid State and Structural Chemistry Unit, Indian Institute of Science, Bangalore, 560012, India
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Luo L, Gong S, Lei L, Yu X, Zhong S. A new Cd(II) Complex: Fluorescence Performances, Loading with Budesonide-hydrogels on Pediatric Asthma and Molecular Docking. J Fluoresc 2024:10.1007/s10895-024-03621-z. [PMID: 38407702 DOI: 10.1007/s10895-024-03621-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Accepted: 02/19/2024] [Indexed: 02/27/2024]
Abstract
By applying the phosphonic acid ligand to the solvothermal reaction of nitrobenzylphosphonic acid (H2L) with Cd(NO3)2·4H2O in a mixed solvent of water and DMF, a novel Cd(II)-based coordination polymer, {[Cd(L)(H2O)2](H2O)}n (1), was successfully synthesized in this study. The excellent fluorescence performance of complex 1 was confirmed through fluorescence spectroscopy testing, and the obtained CIE standard coordinates (0.1599, 0.0786) positioned it in the blue fluorescence region. Transparent hyaluronic acid/carboxymethyl chitosan hydrogels were prepared using chemical synthesis, and their internal microstructure was observed. Using budesonide as a drug model, a new budesonide metal gel was prepared, and its therapeutic efficacy in treating pediatric asthma was evaluated. Molecular docking simulations indicated that the Cd complex formed three hydrogen bonding interactions with the target protein through its nitro group, revealing the potential origin of its biological activity.
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Affiliation(s)
- Lu Luo
- Department of Paediatrics, The Seventh People's Hospital of Chongqing, Chongqing, China
| | - Siming Gong
- Institute of Cardiovascular Diseases of PLA, T Second Affiliated Hospital, Army Medical University (Third Military Medical University), Chongqing, China
| | - Lin Lei
- Department of Cancer Center, Daping Hospital, Army Medical University, Chongqing, China
| | - Xin Yu
- Department of Gastroenterology, Chongqing Hospital of Traditional Chinese Medicine, Chongqing, China
| | - Shimin Zhong
- Department of Paediatrics, The Seventh People's Hospital of Chongqing, Chongqing, China.
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Jaiswal S, Pandey SK, Prajapati J, Chandra S, Gond MK, Bharty MK, Tiwari I, Butcher RJ. Cd(II) complexes derived from thiazoline, hydrazide and carbodithioate ligands: synthesis, crystal structures and electrochemical sensing of uric acid. Appl Organomet Chem 2023. [DOI: 10.1002/aoc.7085] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/31/2023]
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Mbani ALO, Yufanyi DM, Tabong CD, Hubert NJ, Yuoh ACB, Paboudam AG, Ondoh AM. Synthesis, crystal structure, DFT studies and Hirshfeld surface analysis of Manganese(II) and Cadmium(II) coordination polymers of 2-aminopyridine and dicyanamide. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132956] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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5
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New 15-membered macrocyclic Schiff base ligand; synthesis some Cd(II), Mn(II) and Zn(II) complexes, crystal structure, cytotoxicity, antibacterial and antioxidant activity. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2021.132049] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Majumdar D, Elizabeth Philip J, Roy S, Tüzün B. Reinvigorate the synthesis, spectroscopic findings, SEM morphology investigation, and antimicrobial silhouette of contemporary Salen ligands: A comprehensive DFT landscape. RESULTS IN CHEMISTRY 2022. [DOI: 10.1016/j.rechem.2022.100574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
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Nong W, Wu J, Ghiladi RA, Guan Y. The structural appeal of metal–organic frameworks in antimicrobial applications. Coord Chem Rev 2021. [DOI: 10.1016/j.ccr.2021.214007] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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An insight to the spin density distribution and non-covalent interactions in a carboxylate bridged class-I mixed valence cobalt(II),cobalt(III) complex of quadruplet nature. Inorganica Chim Acta 2021. [DOI: 10.1016/j.ica.2021.120298] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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9
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Experimental and theoretical corroboration of antimicrobial and anticancer activities of two pseudohalides induced structurally diverse Cd (II)-Salen complexes. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129189] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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Soltani S, Akhbari K, White J. Effect of structural features on the stability and bactericidal potential of two cadmium coordination polymers. CrystEngComm 2021. [DOI: 10.1039/d1ce00979f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Two mixed ligand Cd(ii) coordination polymers have been synthesized using three methods by in situ decarboxylation of phenylmalonic acid. CPs were screened for their antibacterial activities and the influence of structural properties was studied.
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Affiliation(s)
- Sajjad Soltani
- School of Chemistry, College of Science, University of Tehran, Tehran, Iran
| | - Kamran Akhbari
- School of Chemistry, College of Science, University of Tehran, Tehran, Iran
| | - Jonathan White
- School of Chemistry, Bio21 Institute, The University of Melbourne, VIC 3010, Australia
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Lozovan V, Kravtsov VC, Coropceanu EB, Siminel N, Kulikova OV, Costriucova NV, Fonari MS. Seven Zn(II) and Cd(II) 1D coordination polymers based on azine donor linkers and decorated with 2-thiophenecarboxylate: Syntheses, structural parallels, Hirshfeld surface analysis, and spectroscopic and inclusion properties. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114702] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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DFT investigations of linear Zn3-type complex with compartmental N/O-donor Schiff base: Synthesis, characterizations, crystal structure, fluorescence and molecular docking. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.127936] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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13
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Singh R, Kociok-Köhn G, Kaur Jassal A, Singh L. Three-dimensional hydrogen-bonded magnesium(II) supramolecular motifs based on in situ generated alkanesulfonate (Me/Et/ PrSO3−) ligands: A combined experimental and computational study. Polyhedron 2020. [DOI: 10.1016/j.poly.2019.114200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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14
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Majumdar D, Agrawal Y, Thomas R, Ullah Z, Santra MK, Das S, Pal TK, Bankura K, Mishra D. Syntheses, characterizations, crystal structures, DFT/TD‐DFT, luminescence behaviors and cytotoxic effect of bicompartmental Zn (II)‐dicyanamide Schiff base coordination polymers: An approach to apoptosis, autophagy and necrosis type classical cell death. Appl Organomet Chem 2019. [DOI: 10.1002/aoc.5269] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Dhrubajyoti Majumdar
- Department of ChemistryTamralipta Mahavidyalaya Tamluk 721636 West Bengal India
- Department of Applied ChemistryIndian Institute of Technology (Indian School of Mines) Dhanbad Jharkhand 826004 India
| | - Yashika Agrawal
- National Center for Cell Science Pune 411007 Maharashtra India
| | - Renjith Thomas
- Department of ChemistrySt Berchmans College (Autonomous) Changanassery Kerala 686101 India
| | - Zakir Ullah
- Department of ChemistryKorea Advanced Institute of Science and Technology (KAIST) Daejeon 34141 Republic of Korea
- Center for Catalytic Hydrocarbon FunctionalizationInstitute for Basic Science (IBS) Daejeon 34141 Republic of Korea
| | - Manas K. Santra
- National Center for Cell Science Pune 411007 Maharashtra India
| | - Sourav Das
- Department of ChemistryInstitute of Infrastructure Technology Research and Management Ahmedabad 380026 Gujarat India
| | - Tapan K. Pal
- School of Liberal StudiesPandit Deendayal Petroleum University Gandhinagar 382421 India
| | - Kalipada Bankura
- Department of ChemistryTamralipta Mahavidyalaya Tamluk 721636 West Bengal India
| | - Dipankar Mishra
- Department of ChemistryTamralipta Mahavidyalaya Tamluk 721636 West Bengal India
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Majumdar D, Das D, Sreejith S, Nag S, Dey S, Mondal S, Bankura K, Mishra D. Synthesis, characterizations and single crystal structure of di-nuclear azido-bridged Cd(II) coordination polymer with Schiff base precursor (H2LpentOMe): DFT, fluorescence, solvatochromism and in vitro antimicrobial assay. Inorganica Chim Acta 2019. [DOI: 10.1016/j.ica.2019.119069] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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Majumdar D, Das S, Thomas R, Ullah Z, Sreejith S, Das D, Shukla P, Bankura K, Mishra D. Syntheses, X-ray crystal structures of two new Zn(II)-dicyanamide complexes derived from H2vanen-type compartmental ligands: Investigation of thermal, photoluminescence, in vitro cytotoxic effect and DFT-TDDFT studies. Inorganica Chim Acta 2019. [DOI: 10.1016/j.ica.2019.04.041] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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Majumdar D, Biswas JK, Mondal M, Babu MSS, Das S, Metre RK, SreeKumar SS, Bankura K, Mishra D. Cd(II) Pseudohalide Complexes with N, N′-Bis(3-ethoxysalicylidenimino) 1,3-Diaminopropane: Crystal Structures, Hirshfeld Surface, Antibacterial and Anti-Biofilm Properties. ChemistrySelect 2018. [DOI: 10.1002/slct.201702970] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Affiliation(s)
- Dhrubajyoti Majumdar
- Department of Chemistry; Tamralipta Mahavidyalaya; Tamluk-721636, West Bengal India
| | - Jayanta Kumar Biswas
- Department of Ecological Studies & International Centre for Ecological Engineering; University of Kalyani; Kalyani 741235, West Bengal India
| | - Monojit Mondal
- Department of Ecological Studies & International Centre for Ecological Engineering; University of Kalyani; Kalyani 741235, West Bengal India
| | | | - Sourav Das
- Department of Chemistry; Institute of Infrastructure Technology Research and Management; Near Khokhara Circle, Maninagar East Ahmedabad-380026 Gujarat India
| | - Ramesh K. Metre
- Department of Chemistry; Indian Institute of Technology Jodhpur; Rajasthan 342037 India
| | - Sreejith S. SreeKumar
- Department of Applied Chemistry; Cochin University of Science and Technology; Kochi 682022, Kerala India
| | - Kalipada Bankura
- Department of Chemistry; Tamralipta Mahavidyalaya; Tamluk-721636, West Bengal India
| | - Dipankar Mishra
- Department of Chemistry; Tamralipta Mahavidyalaya; Tamluk-721636, West Bengal India
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18
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Mandal S, Mondal M, Biswas JK, Cordes DB, Slawin AM, Butcher RJ, Saha M, Chandra Saha N. Synthesis, characterization and antimicrobial activity of some nickel, cadmium and mercury complexes of 5-methyl pyrazole-3yl-N-(2′-methylthiophenyl) methyleneimine, (MPzOATA) ligand. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2017.09.015] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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