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Solórzano ER, Pastore P, Dolmella A, Cazorla S, Cassará MLA, Sankaran SV, Thamotharan S, Gil DM. Importance of R-CH3⋯O tetrel bonding and vinyl⋯aryl stacking interactions in stabilizing the crystal packing of 2’,4’-dihydroxy-3’-methoxychalcone: Exploration of antileishmanial activity and molecular docking studies. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133357] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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2
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Shi Y, Liang J, Babu Shrestha B, Wang Z, Zhang Y, Jin J. Enhancing the CO2 plasticization resistance of thin polymeric membranes by designing Metal-polymer complexes. Sep Purif Technol 2022. [DOI: 10.1016/j.seppur.2022.120699] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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Galvez CE, Piro OE, Echeverría GA, Robles NL, Lezama JOG, Sankaran SV, Thamotharan S, Villecco MB, Loandos MDH, Gil DM. Experimental and theoretical insights into the formation of weak hydrogen bonds and H⋯H bonding interactions in the solid-state structure of two eucalyptol derivatives. NEW J CHEM 2022. [DOI: 10.1039/d2nj00428c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report the synthesis and X-ray solid-state structure of two eucalyptol derivatives. Both compounds form self-assembled dimers establishing C–H⋯O hydrogen bonds and H⋯H bonding interactions.
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Affiliation(s)
- Carolina E. Galvez
- Cátedra de Química Orgánica II, Instituto de Química Orgánica, Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán, Ayacucho 471, T4000INI, San Miguel de Tucumán, Argentina
| | - Oscar E. Piro
- Departamento de Física, Facultad de Ciencias Exactas, Universidad Nacional de La Plata e IFLP (CONICET, CCT-La Plata), C. C. 67, 1900, La Plata, Argentina
| | - Gustavo A. Echeverría
- Departamento de Física, Facultad de Ciencias Exactas, Universidad Nacional de La Plata e IFLP (CONICET, CCT-La Plata), C. C. 67, 1900, La Plata, Argentina
| | - Norma Lis Robles
- INQUINOA (CONICET – UNT), Facultad de Ciencias Exactas y Tecnología, Universidad Nacional de Tucumán. Av. Independencia 1800, CP 4000, San Miguel de Tucumán, Argentina
| | - José O. G. Lezama
- INBIOFAL (CONICET – UNT), Instituto de Química Orgánica, Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán, Ayacucho 471, T4000INI, San Miguel de Tucumán, Argentina
| | - Sankaran Venkatachalam Sankaran
- Biomolecular Crystallography Laboratory, Department of Bioinformatics, School of Chemical and Biotechnology, SASTRA Deemed University, Thanjavur 613 401, India
| | - Subbiah Thamotharan
- Biomolecular Crystallography Laboratory, Department of Bioinformatics, School of Chemical and Biotechnology, SASTRA Deemed University, Thanjavur 613 401, India
| | - Margarita B. Villecco
- Cátedra de Química Orgánica II, Instituto de Química Orgánica, Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán, Ayacucho 471, T4000INI, San Miguel de Tucumán, Argentina
| | - María del H. Loandos
- Cátedra de Química Orgánica II, Instituto de Química Orgánica, Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán, Ayacucho 471, T4000INI, San Miguel de Tucumán, Argentina
| | - Diego M. Gil
- INBIOFAL (CONICET – UNT), Instituto de Química Orgánica, Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán, Ayacucho 471, T4000INI, San Miguel de Tucumán, Argentina
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Pérez H, Di Santo A, Piro OE, Echeverría GA, González M, Ben Altabef A, Gomila RM, Frontera A, Gil DM. Novel 'main-part' isostructuralism in metal complexes with 1-methylimidazole: crystal structures, energy calculations and magnetic properties. Dalton Trans 2021; 50:17029-17040. [PMID: 34761774 DOI: 10.1039/d1dt03159g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Two new transition metal complexes with 1-methylimidazole (1-MeIm) and azide as ligands, namely, [Co(1-MeIm)4(N3)2] (1) and [Ni(1-MeIm)4(N3)2] (2), have been synthesized and characterized by IR, Raman, UV-Vis and XPS spectroscopy. Their crystal structures were solved by single-crystal X-ray diffraction. The supramolecular self-assembly of the two complexes is governed by non-classical C-H⋯N hydrogen bonds and C-H⋯π interactions. Lattice energies and intermolecular interaction energies for various molecular pairs are quantified using the PIXEL method. DFT computational studies to assess the binding energy through modern tools like non-covalent interaction (NCI plots) analysis and reduced density gradient (RDG) analysis have also been carried out. A detailed analysis of geometric descriptors revealed the existence of quasi-isostructural pairs or 'main-part' isostructuralism in a series formed by 1, 2, and a related cadmium complex, being more evident in the 1/2 pair. DFT studies using theoretical models have been used to disclose the relative importance of the H-bond and C-H⋯π noncovalent interactions. Magnetic measurements for compound 1 show weak ferrimagnetic coupling between adjacent M(II) centers, mediated by H-bonding and C-H⋯π non-covalent interactions.
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Affiliation(s)
- Hiram Pérez
- Departamento de Química General e Inorgánica, Facultad de Química, Universidad de La Habana, CP 10400, La Habana, Cuba.
| | - Alejandro Di Santo
- INQUINOA (CONICET - UNT), Instituto de Química Física, Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán, San Lorenzo 456, T4000CAN, San Miguel de Tucumán, Argentina
| | - Oscar E Piro
- Departamento de Física, Facultad de Ciencias Exactas, Universidad Nacional de La Plata and IFLP institute (CONICET, CCT-La Plata), C.C. 67, 1900, La Plata, Argentina.
| | - Gustavo A Echeverría
- Departamento de Física, Facultad de Ciencias Exactas, Universidad Nacional de La Plata and IFLP institute (CONICET, CCT-La Plata), C.C. 67, 1900, La Plata, Argentina.
| | - Marlene González
- CONACyT-Instituto Politécnico Nacional, Centro de Investigación en Ciencia Aplicada y Tecnología Avanzada, U. Legaria, Ciudad de México, Mexico
| | - Aida Ben Altabef
- INQUINOA (CONICET - UNT), Instituto de Química Física, Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán, San Lorenzo 456, T4000CAN, San Miguel de Tucumán, Argentina
| | - Rosa M Gomila
- Departament de Química, Universitat de les Illes Balears, Crta de Valldemossa km 7.5, 07122 Palma de Mallorca, Baleares, Spain
| | - Antonio Frontera
- Departament de Química, Universitat de les Illes Balears, Crta de Valldemossa km 7.5, 07122 Palma de Mallorca, Baleares, Spain
| | - Diego M Gil
- Departamento de Física, Facultad de Ciencias Exactas, Universidad Nacional de La Plata and IFLP institute (CONICET, CCT-La Plata), C.C. 67, 1900, La Plata, Argentina. .,INBIOFAL (CONICET - UNT), Instituto de Química Orgánica, Facultad de Bioquímica, Química y Farmacia, Universidad Nacional de Tucumán, Ayacucho 471, T4000INI, San Miguel de Tucumán, Argentina
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Rocha M, Echeverría GA, Piro OE, Jios JL, Ulic SE, Gil DM. Role of fluorine-fluorine and weak intermolecular interactions in the supramolecular network of a new trifluoromethyl-1,5-benzodiazepine: Crystal structure, Hirshfeld surface analysis and theoretical study. J Fluor Chem 2021. [DOI: 10.1016/j.jfluchem.2020.109697] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Ahmed MN, Arif M, Andleeb H, Ali Shah SW, Arshad I, Tahir MN, Rocha M, Gil DM. Interplay of weak noncovalent interactions in alkoxybenzylidene derivatives of benzohydrazide and acetohydrazide: a combined experimental and theoretical investigation and lipoxygenase inhibition (LOX) studies. CrystEngComm 2021. [DOI: 10.1039/d0ce01402h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Three hydrazide-based Schiff bases have been synthesized and characterized by IR, UV-vis and X-ray diffraction methods. A detail analysis of intermolecular interactions has been performed by Hirshfeld surface analysis and DFT calculations.
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Affiliation(s)
- Muhammad Naeem Ahmed
- Department of Chemistry
- The University of Azad Jammu & Kashmir
- Muzaffarabad 13100
- Pakistan
| | - Muneeba Arif
- Department of Chemistry
- The University of Azad Jammu & Kashmir
- Muzaffarabad 13100
- Pakistan
| | - Hina Andleeb
- Department of Chemistry
- Quaid-i-Azam University
- Islamabad 45320
- Pakistan
- Sulaiman Bin Abdullah Aba Al-Khail – Centre for Interdisciplinary Research in Basic Science (SA-CIRBS)
| | | | - Ifzan Arshad
- Department of Chemistry
- Quaid-i-Azam University
- Islamabad 45320
- Pakistan
| | | | - Mariana Rocha
- INBIOFAL (CONICET – UNT)
- Instituto de Química Orgánica – Cátedra de Química Orgánica I
- Facultad de Bioquímica
- Química y Farmacia
- Universidad Nacional de Tucumán
| | - Diego M. Gil
- INBIOFAL (CONICET – UNT)
- Instituto de Química Orgánica – Cátedra de Química Orgánica I
- Facultad de Bioquímica
- Química y Farmacia
- Universidad Nacional de Tucumán
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Saeed A, Khurshid A, Flörke U, Echeverría GA, Piro OE, Gil DM, Rocha M, Frontera A, El-Seedi HR, Mumtaz A, Erben MF. Intermolecular interactions in antipyrine-like derivatives 2-halo- N-(1,5-dimethyl-3-oxo-2-phenyl-2,3-dihydro-1 H-pyrazol-4-yl)benzamides: X-ray structure, Hirshfeld surface analysis and DFT calculations. NEW J CHEM 2020. [DOI: 10.1039/d0nj03958f] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Based on experimental and computational data, a complex network of intermolecular interactions has been rationalized for antipyrine compounds.
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