Quasistructural molecules

Quantum-Chemical and Quantum-Graph Models of the Dynamical Structure of CH5. J Chem Theory Comput 2023;19:42-50. [PMID: 36534596 DOI: 10.1021/acs.jctc.2c00991] [Citation(s) in RCA: 0] [Impact Index Per Article: 0]

Experimental and computational results about the structure, dynamics, and rovibrational spectra of protonated methane have challenged a considerable number of traditional chemical concepts. Hereby theoretical and computational results are provided about the dynamical structure of CH₅⁺. It is shown that the ground vibrational state investigated thus far by computations, forbidden by nuclear-spin statistics, has a structure similar to the first allowed vibrational state and, in fact, the structures of all vibrational states significantly below 200 cm^-1 are highly similar. Spatial delocalization of the nuclei, determined by nuclear densities computed from accurate variational vibrational wave functions, turns out to be limited when viewed in the body-fixed frame, confirming that the effective structure of CH₅⁺ is well described as a CH₃⁺ tripod with a H₂ unit on top of it. The interesting and unusual qualitative aspects of the sophisticated state-dependent variational results receive full explanation via simple quantum-graph models.

Structure, energetics, and spectroscopy of the chromophores of HHe+n, H2He+n, and He+n clusters and their deuterated isotopologues

The linear molecular ions H₂He⁺, HHe+2, and He+3 are the central units (chromophores) of certain He-solvated complexes of the H₂He+n, HHe+n, and He+n families, respectively. These are complexes which do exist, according to mass-spectrometry studies, up to very high n values. Apparently, for some of the H₂He+n and He+n complexes, the linear symmetric tetratomic H₂He+2 and the diatomic He+2 cations, respectively, may also be the central units. In this study, definitive structures, relative energies, zero-point vibrational energies, and (an)harmonic vibrational fundamentals, and, in some cases, overtones and combination bands, are established mostly for the triatomic chromophores. The study is also extended to the deuterated isotopologues D₂He⁺, DHe+2, and D₂He+2. To facilitate and improve the electronic-structure computations performed, new atom-centered, fixed-exponent, Gaussian-type basis sets called MAX, with X = T(3), Q(4), P(5), and H(6), are designed for the H and He atoms. The focal-point-analysis (FPA) technique is employed to determine definitive relative energies with tight uncertainties for reactions involving the molecular ions. The FPA results determined include the 0 K proton and deuteron affinities of the ⁴He atom, 14 875(9) cm^-1 [177.95(11) kJ mol^-1] and 15 229(8) cm^-1 [182.18(10) kJ mol^-1], respectively, the dissociation energies of the He+2 → He⁺ + He, HHe+2 → HHe⁺ + He, and He+3 → He+2 + He reactions, 19 099(13) cm^-1 [228.48(16) kJ mol^-1], 3948(7) cm^-1 [47.23(8) kJ mol^-1], and 1401(12) cm^-1 [16.76(14) kJ mol^-1], respectively, the dissociation energy of the DHe+2 → DHe⁺ + He reaction, 4033(6) cm^-1 [48.25(7) kJ mol^-1], the isomerization energy between the two linear isomers of the [H, He, He]⁺ system, 3828(40) cm^-1 [45.79(48) kJ mol^-1], and the dissociation energies of the H₂He⁺ → H+2 + He and the H₂He+2 → H₂He⁺ + He reactions, 1789(4) cm^-1 [21.40(5) kJ mol^-1] and 435(6) cm^-1 [5.20(7) kJ mol^-1], respectively. The FPA estimates of the first dissociation energy of D₂He⁺ and D₂He+2 are 1986(4) cm^-1 [23.76(5) kJ mol^-1] and 474(5) cm^-1 [5.67(6) kJ mol^-1], respectively. Determining the vibrational fundamentals of the triatomic chromophores with second-order vibrational perturbation theory (VPT2) and vibrational configuration interaction (VCI) techniques, both built around the Eckart-Watson Hamiltonian, proved unusually challenging. For the species studied, VPT2 has difficulties yielding dependable results, in some cases even for the fundamentals of the H-containing molecular cations, while carefully executed VCI computations yield considerably improved spectroscopic results. In a few cases unusually large anharmonic corrections to the fundamentals, on the order of 15% of the harmonic value, have been observed.

Infrared spectroscopy of carbocations upon electron ionization of ethylene in helium nanodroplets

The electron impact ionization of helium droplets doped with ethylene molecules and clusters yields diverse C_XH_Y ⁺ cations embedded in the droplets. The ionization primarily produces C₂H₂ ⁺, C₂H₃ ⁺, C₂H₄ ⁺, and CH₂ ⁺, whereas larger carbocations are produced upon the reactions of the primary ions with ethylene molecules. The vibrational excitation of the cations leads to the release of bare cations and cations with a few helium atoms attached. The laser excitation spectra of the embedded cations show well resolved vibrational bands with a few wavenumber widths-an order of magnitude less than those previously obtained in solid matrices or molecular beams by tagging techniques. Comparison with the previous studies of free and tagged CH₂ ⁺, CH₃ ⁺, C₂H₂ ⁺, C₂H₃ ⁺, and C₂H₄ ⁺ cations shows that the helium matrix typically introduces a shift in the vibrational frequencies of less than about 20 cm^-1, enabling direct comparisons with the results of quantum chemical calculations for structure determination. This work demonstrates a facile technique for the production and spectroscopic study of diverse carbocations, which act as important intermediates in gas and condensed phases.

On neglecting Coriolis and related couplings in first-principles rovibrational spectroscopy: Considerations of symmetry, accuracy, and simplicity. II. Case studies for H2O isotopologues, H3+, O3, and NH3

For centuries, it has been known that vibrational and rotational degrees of freedom are in general not separable. Nevertheless, surprisingly little is known about the best strategies for approximately separating these degrees of freedom in practice-even in the case of semirigid molecules, where the separation is most meaningful. There is also some confusion in the literature about the proper way to quantify the magnitude of the Coriolis (i.e., rotation-vibration) coupling in rovibrational Hamiltonians or its effect on the rovibrational eigenenergies. In this study, a vibrational-coordinate-independent metric is proposed to quantify the magnitude of the Coriolis contribution to the rovibrational Hamiltonian. The impact of Coriolis coupling on the rovibrational eigenenergies is computed numerically exactly, using both full and various truncated Hamiltonians. The role played by the choice of the vibrational coordinate system-and especially by the choice of "embedding" or body-fixed frame-is examined extensively, both numerically and analytically. This investigation targets several molecular prototypes, all of which serve as important benchmarks for the high-resolution spectroscopic community. Most of these are triatomic molecules, including water (H₂¹⁶O), its deuterated isotopologues (D₂¹⁶O and HD¹⁶O), H₃⁺, and ozone (¹⁶O₃), but the tetratomic ammonia molecule (¹⁴NH₃) is also investigated. These studies provide important insight into the nature of Coriolis coupling under various circumstances. The findings of this study also have significant practical ramifications, vis-à-vis the use of simplifying numerical approximation techniques in nuclear-motion computations.

Describing Polytopal Rearrangements of Fluxional Molecules with Curvilinear Coordinates Derived from Normal Vibrational Modes: A Conceptual Extension of Cremer-Pople Puckering Coordinates

In this work a new curvilinear coordinate system is presented for the comprehensive description of polytopal rearrangements of N-coordinate compounds (N = 4-7) and systems containing an N-coordinate subunit. It is based on normal vibrational modes and a natural extension of the Cremer-Pople puckering coordinates ( J. Am. Chem. Soc. 1975, 97, 1354) together with the Zou-Izotov-Cremer deformation coordinates ( J. Phys. Chem. A 2011, 115, 8731) for ring structures to N-coordinate systems. We demonstrate that the new curvilinear coordinates are ideal reaction coordinates describing fluxional rearrangement pathways by revisiting the Berry pseudorotation and the lever mechanism in sulfur tetrafluoride, the Berry pseudorotation and two Muetterties' mechanisms in pentavalent compounds, the chimeric pseudorotation in iodine pentafluoride, Bailar and Ray-Dutt twists in hexacoordinate tris-chelates as well as the Bartell mechanism in iodine heptafluoride. The results of our study reveal that this dedicated curvilinear coordinate system can be applied to most coordination compounds opening new ways for the systematic modeling of fluxional processes.

On neglecting Coriolis and related couplings in first-principles rovibrational spectroscopy: considerations of symmetry, accuracy, and simplicity

The rotation-vibration (Coriolis) coupling contribution to variationally computed rovibrational energy levels is investigated, employing triatomic AB[Formula: see text] molecules as models. In particular, calculations are performed for H[Formula: see text][Formula: see text]O, across a range of vibrational and rotational excitations, both with and without the Coriolis contribution. A variety of different embedding choices are considered, together with a hierarchy of increasingly severe approximations culminating in a generalized version of the so-called "centrifugal sudden" method. Several surprising and remarkable conclusions are found, including that the Eckart embedding is not the best embedding choice.