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Pereira PDC, Henrique EP, da Costa ER, Falcão ADJ, de Melo MAD, Schneider MPC, Burbano RMR, Diniz DG, Magalhães NGDM, Sherry DF, Diniz CWP, Guerreiro-Diniz C. Molecular Changes in the Brain of the Wintering Calidris pusilla in the Mangroves of the Amazon River Estuary. Int J Mol Sci 2023; 24:12712. [PMID: 37628893 PMCID: PMC10454129 DOI: 10.3390/ijms241612712] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Revised: 07/30/2023] [Accepted: 08/01/2023] [Indexed: 08/27/2023] Open
Abstract
Migrant birds prepare differently to fly north for breeding in the spring and for the flight to lower latitudes during autumn, avoiding the cold and food shortages of the Northern Hemisphere's harsh winter. The molecular events associated with these fundamental stages in the life history of migrants include the differential gene expression in different tissues. Semipalmated sandpipers (Calidris pusilla) are Arctic-breeding shorebirds that migrate to the coast of South America during the non-breeding season. In a previous study, we demonstrated that between the beginning and the end of the wintering period, substantial glial changes and neurogenesis occur in the brain of C. pusilla. These changes follow the epic journey of the autumn migration when a 5-day non-stop transatlantic flight towards the coast of South America and the subsequent preparation for the long-distance flight of the spring migration takes place. Here, we tested the hypothesis that the differential gene expressions observed in the brains of individuals captured in the autumn and spring windows are consistent with the previously described cellular changes. We searched for differential gene expressions in the brain of the semipalmated sandpiper, of recently arrived birds (RA) from the autumnal migration, and that of individuals in the premigratory period (PM) in the spring. All individuals were collected in the tropical coastal of northern Brazil in the mangrove region of the Amazon River estuary. We generated a de novo neurotranscriptome for C. pusilla individuals and compared the gene expressions across libraries. To that end, we mapped an RNA-Seq that reads to the C. pusilla neurotranscriptome in four brain samples of each group and found that the differential gene expressions in newly arrived and premigratory birds were related with neurogenesis, metabolic pathways (ketone body biosynthetic and the catabolic and lipid biosynthetic processes), and glial changes (astrocyte-dopaminergic neuron signaling, astrocyte differentiation, astrocyte cell migration, and astrocyte activation involved in immune response), as well as genes related to the immune response to virus infections (Type I Interferons), inflammatory cytokines (IL-6, IL-1β, TNF, and NF-κB), NLRP3 inflammasome, anti-inflammatory cytokines (IL-10), and cell death pathways (pyroptosis- and caspase-related changes).
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Affiliation(s)
- Patrick Douglas Corrêa Pereira
- Laboratório de Biologia Molecular e Neuroecologia, Campus Bragança, Instituto Federal de Educação, Ciência e Tecnologia do Pará, Bragança 68600-000, PA, Brazil; (P.D.C.P.)
| | - Ediely Pereira Henrique
- Laboratório de Biologia Molecular e Neuroecologia, Campus Bragança, Instituto Federal de Educação, Ciência e Tecnologia do Pará, Bragança 68600-000, PA, Brazil; (P.D.C.P.)
| | - Emanuel Ramos da Costa
- Laboratório de Biologia Molecular e Neuroecologia, Campus Bragança, Instituto Federal de Educação, Ciência e Tecnologia do Pará, Bragança 68600-000, PA, Brazil; (P.D.C.P.)
| | - Anderson de Jesus Falcão
- Laboratório de Biologia Molecular e Neuroecologia, Campus Bragança, Instituto Federal de Educação, Ciência e Tecnologia do Pará, Bragança 68600-000, PA, Brazil; (P.D.C.P.)
| | - Mauro André Damasceno de Melo
- Laboratório de Biologia Molecular e Neuroecologia, Campus Bragança, Instituto Federal de Educação, Ciência e Tecnologia do Pará, Bragança 68600-000, PA, Brazil; (P.D.C.P.)
| | | | | | - Daniel Guerreiro Diniz
- Laboratório de Investigações em Neurodegeneração e Infecção, Hospital Universitário João de Barros Barreto, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém 66075-110, PA, Brazil
- Laboratório de Microscopia Eletrônica, Seção de Hepatologia, Instituto Evandro Chagas, Belém 66093-020, PA, Brazil
| | - Nara Gyzely de Morais Magalhães
- Laboratório de Biologia Molecular e Neuroecologia, Campus Bragança, Instituto Federal de Educação, Ciência e Tecnologia do Pará, Bragança 68600-000, PA, Brazil; (P.D.C.P.)
| | - David Francis Sherry
- Department of Psychology, Advanced Facility for Avian Research, University of Western Ontario, London, ON N6G 1G9, Canada
| | - Cristovam Wanderley Picanço Diniz
- Laboratório de Investigações em Neurodegeneração e Infecção, Hospital Universitário João de Barros Barreto, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém 66075-110, PA, Brazil
| | - Cristovam Guerreiro-Diniz
- Laboratório de Biologia Molecular e Neuroecologia, Campus Bragança, Instituto Federal de Educação, Ciência e Tecnologia do Pará, Bragança 68600-000, PA, Brazil; (P.D.C.P.)
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Blank MH, Guimarães PR, do Nascimento LF, Pereira RJG. Ecological drivers of breeding periodicity in four forest neotropical eagles. Sci Rep 2023; 13:4385. [PMID: 36928378 PMCID: PMC10020578 DOI: 10.1038/s41598-023-31274-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Accepted: 03/09/2023] [Indexed: 03/18/2023] Open
Abstract
We explore the potential factors that affect clutch initiation in four Neotropical large raptors (Harpy eagle-HE, Crested eagle-CE, Ornate hawk-eagle-OHE, and Black hawk-eagle-BHE) by analyzing 414 clutch events mostly obtained from captive individuals. Differences in how clutch initiation is associated with changes in photoperiod were found between HE and both hawk-eagles, and between CE and BHE. Changes in temperature at the time of clutch initiation only differed between HE and OHE, whereas changes in precipitation varied between BHE and all other species. Principal Component Analysis of these environmental cues showed that ellipses in the dataset of each species overlap, but only ellipses from CE and OHE had the same variation trends. This means that although these species live under similar ecological conditions, they exhibit three different patterns of response to environmental cues. Apparently, these patterns are not associated with phylogenetic relatedness because species belonging to the same clade do not show the same response pattern. Diet diversity analysis revealed that HE has the least varied diet, and CE and OHE the most varied diet. The fact that species who fit the same reproductive timing response to environmental cues show similar diets leads us to hypothesize that breeding in these eagles was most likely shaped by food availability.
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Affiliation(s)
- Marcel Henrique Blank
- Grupo de Estudos para Multiplicação de Aves, Departamento de Reprodução Animal, Faculdade de Medicina Veterinária e Zootecnia, Universidade de São Paulo, Av. Duque de Caxias Norte, 255, Pirassununga, SP, 13635-900, Brazil
| | - Paulo Roberto Guimarães
- Departamento de Ecologia, Instituto de Biociências, Universidade de São Paulo, Rua Do Matão 321, Travessa 14, São Paulo, SP, 05508-090, Brazil
| | - Lucas Ferreira do Nascimento
- Programa de Pós-Graduação em Ecologia, Instituto de Biociências, Universidade de São Paulo, Rua do Matão 321, Travessa 14, São Paulo, SP, 05508-090, Brazil
| | - Ricardo Jose Garcia Pereira
- Grupo de Estudos para Multiplicação de Aves, Departamento de Reprodução Animal, Faculdade de Medicina Veterinária e Zootecnia, Universidade de São Paulo, Av. Duque de Caxias Norte, 255, Pirassununga, SP, 13635-900, Brazil.
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