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Pirhadi A, Salari S, Ahmad MO, Rivaz H, Xiao Y. Robust landmark-based brain shift correction with a Siamese neural network in ultrasound-guided brain tumor resection. Int J Comput Assist Radiol Surg 2023; 18:501-508. [PMID: 36306056 DOI: 10.1007/s11548-022-02770-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Accepted: 09/29/2022] [Indexed: 11/05/2022]
Abstract
PURPOSE In brain tumor surgery, tissue shift (called brain shift) can move the surgical target and invalidate the surgical plan. A cost-effective and flexible tool, intra-operative ultrasound (iUS) with robust image registration algorithms can effectively track brain shift to ensure surgical outcomes and safety. METHODS We proposed to employ a Siamese neural network, which was first trained using natural images and fine-tuned with domain-specific data to automatically detect matching anatomical landmarks in iUS scans at different surgical stages. An efficient 2.5D approach and an iterative re-weighted least squares algorithm are utilized to perform landmark-based registration for brain shift correction. The proposed method is validated and compared against the state-of-the-art methods using the public BITE and RESECT datasets. RESULTS Registration of pre-resection iUS scans to during- and post-resection iUS images were executed. The results with the proposed method shows a significant improvement from the initial misalignment ([Formula: see text]) and the method is comparable to the state-of-the-art methods validated on the same datasets. CONCLUSIONS We have proposed a robust technique to efficiently detect matching landmarks in iUS and perform brain shift correction with excellent performance. It has the potential to improve the accuracy and safety of neurosurgery.
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Affiliation(s)
- Amir Pirhadi
- Department of Electrical and Computer Engineering, Concordia University, Montreal, Canada.
| | - Soorena Salari
- Department of Computer Science and Software Engineering, Concordia University, Montreal, Canada
| | - M Omair Ahmad
- Department of Electrical and Computer Engineering, Concordia University, Montreal, Canada
| | - Hassan Rivaz
- Department of Electrical and Computer Engineering and PERFORM Centre, Concordia University, Montreal, Canada
| | - Yiming Xiao
- Department of Computer Science and Software Engineering and PERFORM Centre, Concordia University, Montreal, Canada
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Zhao Z, Poyhonen J, Chen Cai X, Sophie Woodley Hooper F, Ma Y, Hu Y, Ren H, Song W, Tsz Ho Tse Z. Augmented reality technology in image-guided therapy: State-of-the-art review. Proc Inst Mech Eng H 2021; 235:1386-1398. [PMID: 34304631 PMCID: PMC8573682 DOI: 10.1177/09544119211034357] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Image-guided therapies have been on the rise in recent years as they can achieve higher accuracy and are less invasive than traditional methods. By combining augmented reality technology with image-guided therapy, more organs, and tissues can be observed by surgeons to improve surgical accuracy. In this review, 233 publications (dated from 2015 to 2020) on the design and application of augmented reality-based systems for image-guided therapy, including both research prototypes and commercial products, were considered for review. Based on their functions and applications. Sixteen studies were selected. The engineering specifications and applications were analyzed and summarized for each study. Finally, future directions and existing challenges in the field were summarized and discussed.
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Affiliation(s)
- Zhuo Zhao
- School of Electrical and Computer Engineering, University of Georgia, Athens, GA, USA
| | - Jasmin Poyhonen
- Department of Electronic Engineering, University of York, York, UK
| | - Xin Chen Cai
- Department of Electronic Engineering, University of York, York, UK
| | | | - Yangmyung Ma
- Hull York Medical School, University of York, York, UK
| | - Yihua Hu
- Department of Electronic Engineering, University of York, York, UK
| | - Hongliang Ren
- Department of Electronic Engineering The Chinese University of Hong Kong (CUHK), Hong Kong, China
| | - Wenzhan Song
- School of Electrical and Computer Engineering, University of Georgia, Athens, GA, USA
| | - Zion Tsz Ho Tse
- Department of Electronic Engineering, University of York, York, UK
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3
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Segmentation-based registration of ultrasound volumes for glioma resection in image-guided neurosurgery. Int J Comput Assist Radiol Surg 2019; 14:1697-1713. [PMID: 31392670 PMCID: PMC6797669 DOI: 10.1007/s11548-019-02045-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2019] [Accepted: 07/29/2019] [Indexed: 10/26/2022]
Abstract
PURPOSE In image-guided surgery for glioma removal, neurosurgeons usually plan the resection on images acquired before surgery and use them for guidance during the subsequent intervention. However, after the surgical procedure has begun, the preplanning images become unreliable due to the brain shift phenomenon, caused by modifications of anatomical structures and imprecisions in the neuronavigation system. To obtain an updated view of the resection cavity, a solution is to collect intraoperative data, which can be additionally acquired at different stages of the procedure in order to provide a better understanding of the resection. A spatial mapping between structures identified in subsequent acquisitions would be beneficial. We propose here a fully automated segmentation-based registration method to register ultrasound (US) volumes acquired at multiple stages of neurosurgery. METHODS We chose to segment sulci and falx cerebri in US volumes, which remain visible during resection. To automatically segment these elements, first we trained a convolutional neural network on manually annotated structures in volumes acquired before the opening of the dura mater and then we applied it to segment corresponding structures in different surgical phases. Finally, the obtained masks are used to register US volumes acquired at multiple resection stages. RESULTS Our method reduces the mean target registration error (mTRE) between volumes acquired before the opening of the dura mater and during resection from 3.49 mm (± 1.55 mm) to 1.36 mm (± 0.61 mm). Moreover, the mTRE between volumes acquired before opening the dura mater and at the end of the resection is reduced from 3.54 mm (± 1.75 mm) to 2.05 mm (± 1.12 mm). CONCLUSION The segmented structures demonstrated to be good candidates to register US volumes acquired at different neurosurgical phases. Therefore, our solution can compensate brain shift in neurosurgical procedures involving intraoperative US data.
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Jakubovic R, Ramjist J, Gupta S, Guha D, Sahgal A, Foster FS, Yang VXD. High-Frequency Micro-Ultrasound Imaging and Optical Topographic Imaging for Spinal Surgery: Initial Experiences. ULTRASOUND IN MEDICINE & BIOLOGY 2018; 44:2379-2387. [PMID: 30006213 DOI: 10.1016/j.ultrasmedbio.2018.05.003] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2017] [Revised: 04/22/2018] [Accepted: 05/01/2018] [Indexed: 06/08/2023]
Abstract
High frequency micro-ultrasound (µUS) transducers with central frequencies up to 50 MHz facilitate dynamic visualization of patient anatomy with minimal disruption of the surgical work flow. Micro-ultrasound improves spatial resolution over conventional ultrasound imaging from millimeter to micrometer, but compromises depth penetration. This trade-off is sufficient during an open surgery in which the bone is removed and theultrasound probe can be placed into the surgical cavity. By fusing µUS with pre-operative imaging and tracking the ultrasound probe intra-operatively using our optical topographic imaging technology, we can provide dynamic feedback during surgery, thus affecting clinical decision making. We present our initial experience using high-frequency µUS imaging during spinal procedures. Micro-ultrasound images were obtained in five spinal procedures. Medical rationale for use of µUS was provided for each patient. Surgical procedures were performed using the standard clinical practice with bone removal to facilitate real-time ultrasound imaging of the soft tissue. During surgery, the µUS probe was registered to the pre-operative computed tomography and magnetic resonance images. Images obtained comprised five spinal decompression surgeries (four tumor resections, one cystic synovial mass). Micro-ultrasound images obtained during spine surgery delineated exquisite detailing of the spinal anatomy including white matter and gray matter tracts and nerve roots and allowed accurate assessment of the extent of decompression/tumor resection. In conclusion, tracked µUS enables real-time imaging of the surgical cavity, conferring significant qualitative improvement over conventional ultrasound.
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Affiliation(s)
- Raphael Jakubovic
- Department of Physics, Ryerson University, Toronto, Ontario M5B 2K3, Canada; Biophotonics and Bioengineering Laboratory, Ryerson University/Sunnybrook Health Sciences Centre, Toronto, Ontario M4N 3M5, Canada
| | - Joel Ramjist
- Biophotonics and Bioengineering Laboratory, Ryerson University/Sunnybrook Health Sciences Centre, Toronto, Ontario M4N 3M5, Canada
| | - Shaurya Gupta
- Biophotonics and Bioengineering Laboratory, Ryerson University/Sunnybrook Health Sciences Centre, Toronto, Ontario M4N 3M5, Canada
| | - Daipayan Guha
- Biophotonics and Bioengineering Laboratory, Ryerson University/Sunnybrook Health Sciences Centre, Toronto, Ontario M4N 3M5, Canada; Department of Neurosurgery, Sunnybrook Health Sciences Centre, Toronto, Ontario M4N 3M5, Canada
| | - Arjun Sahgal
- Department of Radiation Oncology, Sunnybrook Health Sciences Centre, Toronto, Ontario M4N 3M5, Canada
| | - F Stuart Foster
- Department of Physical Sciences, Odette Cancer Research Program, Sunnybrook Research Institute, Toronto, Ontario M4N 3M5, Canada
| | - Victor X D Yang
- Department of Physics, Ryerson University, Toronto, Ontario M5B 2K3, Canada; Biophotonics and Bioengineering Laboratory, Ryerson University/Sunnybrook Health Sciences Centre, Toronto, Ontario M4N 3M5, Canada; Department of Neurosurgery, Sunnybrook Health Sciences Centre, Toronto, Ontario M4N 3M5, Canada; Department of Electrical Engineering, Ryerson University, Toronto, Ontario M5B 2K3, Canada.
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Machado I, Toews M, Luo J, Unadkat P, Essayed W, George E, Teodoro P, Carvalho H, Martins J, Golland P, Pieper S, Frisken S, Golby A, Wells W. Non-rigid registration of 3D ultrasound for neurosurgery using automatic feature detection and matching. Int J Comput Assist Radiol Surg 2018; 13:1525-1538. [PMID: 29869321 PMCID: PMC6151276 DOI: 10.1007/s11548-018-1786-7] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2018] [Accepted: 05/03/2018] [Indexed: 12/19/2022]
Abstract
PURPOSE The brain undergoes significant structural change over the course of neurosurgery, including highly nonlinear deformation and resection. It can be informative to recover the spatial mapping between structures identified in preoperative surgical planning and the intraoperative state of the brain. We present a novel feature-based method for achieving robust, fully automatic deformable registration of intraoperative neurosurgical ultrasound images. METHODS A sparse set of local image feature correspondences is first estimated between ultrasound image pairs, after which rigid, affine and thin-plate spline models are used to estimate dense mappings throughout the image. Correspondences are derived from 3D features, distinctive generic image patterns that are automatically extracted from 3D ultrasound images and characterized in terms of their geometry (i.e., location, scale, and orientation) and a descriptor of local image appearance. Feature correspondences between ultrasound images are achieved based on a nearest-neighbor descriptor matching and probabilistic voting model similar to the Hough transform. RESULTS Experiments demonstrate our method on intraoperative ultrasound images acquired before and after opening of the dura mater, during resection and after resection in nine clinical cases. A total of 1620 automatically extracted 3D feature correspondences were manually validated by eleven experts and used to guide the registration. Then, using manually labeled corresponding landmarks in the pre- and post-resection ultrasound images, we show that our feature-based registration reduces the mean target registration error from an initial value of 3.3 to 1.5 mm. CONCLUSIONS This result demonstrates that the 3D features promise to offer a robust and accurate solution for 3D ultrasound registration and to correct for brain shift in image-guided neurosurgery.
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Affiliation(s)
- Inês Machado
- Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, 75 Francis St., Boston, MA, 02115, USA.
- IDMEC, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001, Lisbon, Portugal.
| | - Matthew Toews
- École de Technologie Superieure, 1100 Notre-Dame St W, Montreal, QC, H3C 1K3, Canada
| | - Jie Luo
- Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, 75 Francis St., Boston, MA, 02115, USA
- Graduate School of Frontier Sciences, University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, Japan
| | - Prashin Unadkat
- Department of Neurosurgery, Brigham and Women's Hospital, Harvard Medical School, 75 Francis St., Boston, MA, 02115, USA
| | - Walid Essayed
- Department of Neurosurgery, Brigham and Women's Hospital, Harvard Medical School, 75 Francis St., Boston, MA, 02115, USA
| | - Elizabeth George
- Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, 75 Francis St., Boston, MA, 02115, USA
| | - Pedro Teodoro
- IDMEC, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001, Lisbon, Portugal
| | - Herculano Carvalho
- Department of Neurosurgery, CHLN, Hospital de Santa Maria, Avenida Professor Egas Moniz, 1649-035, Lisbon, Portugal
| | - Jorge Martins
- IDMEC, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais 1, 1049-001, Lisbon, Portugal
| | - Polina Golland
- Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, 32 Vassar St, Cambridge, MA, 02139, USA
| | - Steve Pieper
- Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, 75 Francis St., Boston, MA, 02115, USA
- Isomics, Inc., 55 Kirkland St, Cambridge, MA, 02138, USA
| | - Sarah Frisken
- Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, 75 Francis St., Boston, MA, 02115, USA
| | - Alexandra Golby
- Department of Neurosurgery, Brigham and Women's Hospital, Harvard Medical School, 75 Francis St., Boston, MA, 02115, USA
| | - William Wells
- Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, 75 Francis St., Boston, MA, 02115, USA
- Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, 32 Vassar St, Cambridge, MA, 02139, USA
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Ji S, Fan X, Roberts DW, Hartov A, Paulsen KD. Cortical surface shift estimation using stereovision and optical flow motion tracking via projection image registration. Med Image Anal 2014; 18:1169-83. [PMID: 25077845 DOI: 10.1016/j.media.2014.07.001] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2012] [Revised: 07/03/2014] [Accepted: 07/03/2014] [Indexed: 10/25/2022]
Abstract
Stereovision is an important intraoperative imaging technique that captures the exposed parenchymal surface noninvasively during open cranial surgery. Estimating cortical surface shift efficiently and accurately is critical to compensate for brain deformation in the operating room (OR). In this study, we present an automatic and robust registration technique based on optical flow (OF) motion tracking to compensate for cortical surface displacement throughout surgery. Stereo images of the cortical surface were acquired at multiple time points after dural opening to reconstruct three-dimensional (3D) texture intensity-encoded cortical surfaces. A local coordinate system was established with its z-axis parallel to the average surface normal direction of the reconstructed cortical surface immediately after dural opening in order to produce two-dimensional (2D) projection images. A dense displacement field between the two projection images was determined directly from OF motion tracking without the need for feature identification or tracking. The starting and end points of the displacement vectors on the two cortical surfaces were then obtained following spatial mapping inversion to produce the full 3D displacement of the exposed cortical surface. We evaluated the technique with images obtained from digital phantoms and 18 surgical cases - 10 of which involved independent measurements of feature locations acquired with a tracked stylus for accuracy comparisons, and 8 others of which 4 involved stereo image acquisitions at three or more time points during surgery to illustrate utility throughout a procedure. Results from the digital phantom images were very accurate (0.05 pixels). In the 10 surgical cases with independently digitized point locations, the average agreement between feature coordinates derived from the cortical surface reconstructions was 1.7-2.1mm relative to those determined with the tracked stylus probe. The agreement in feature displacement tracking was also comparable to tracked probe data (difference in displacement magnitude was <1mm on average). The average magnitude of cortical surface displacement was 7.9 ± 5.7 mm (range 0.3-24.4 mm) in all patient cases with the displacement components along gravity being 5.2 ± 6.0 mm relative to the lateral movement of 2.4 ± 1.6 mm. Thus, our technique appears to be sufficiently accurate and computationally efficiency (typically ∼15 s), for applications in the OR.
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Affiliation(s)
- Songbai Ji
- Thayer School of Engineering, Dartmouth College, Hanover, NH 03755, USA; Geisel School of Medicine, Dartmouth College, Hanover, NH 03755, USA.
| | - Xiaoyao Fan
- Thayer School of Engineering, Dartmouth College, Hanover, NH 03755, USA
| | - David W Roberts
- Geisel School of Medicine, Dartmouth College, Hanover, NH 03755, USA; Dartmouth Hitchcock Medical Center, Lebanon, NH 03756, USA
| | - Alex Hartov
- Thayer School of Engineering, Dartmouth College, Hanover, NH 03755, USA
| | - Keith D Paulsen
- Thayer School of Engineering, Dartmouth College, Hanover, NH 03755, USA; Geisel School of Medicine, Dartmouth College, Hanover, NH 03755, USA
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7
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Wong JM, Panchmatia JR, Ziewacz JE, Bader AM, Dunn IF, Laws ER, Gawande AA. Patterns in neurosurgical adverse events: intracranial neoplasm surgery. Neurosurg Focus 2012; 33:E16. [DOI: 10.3171/2012.7.focus12183] [Citation(s) in RCA: 76] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Object
Neurosurgery is a high-risk specialty currently undertaking the pursuit of systematic approaches to measuring and improving outcomes. As part of a project to devise evidence-based safety interventions for specialty surgery, the authors sought to review current evidence in cranial tumor resection concerning the frequency of adverse events in practice, their patterns, and current methods of reducing the occurrence of these events. This review represents part of a series of papers written to consolidate information about these events and preventive measures as part of an ongoing effort to ascertain the utility of devising system-wide policies and safety tools to improve neurosurgical practice.
Methods
The authors performed a PubMed search using search terms “intracranial neoplasm,” “cerebral tumor,” “cerebral meningioma,” “glioma,” and “complications” or “adverse events.” Only papers that specifically discussed the relevant complication rates were included. Papers were chosen to maximize the range of rates of occurrence for the reported adverse events.
Results
Review of the tumor neurosurgery literature showed that documented overall complication rates ranged from 9% to 40%, with overall mortality rates of 1.5%–16%. There was a wide range of types of adverse events overall. Deep venous thromboembolism (DVT) was the most common adverse event, with a reported incidence of 3%–26%. The presence of new or worsened neurological deficit was the second most common adverse event found in this review, with reported rates ranging from 0% for the series of meningioma cases with the lowest reported rate to 20% as the highest reported rate for treatment of eloquent glioma. Benign tumor recurrence was found to be a commonly reported adverse event following surgery for intracranial neoplasms. Rates varied depending on tumor type, tumor location, patient demographics, surgical technique, the surgeon's level of experience, degree of specialization, and changes in technology, but these effects remain unmeasured. The incidence on our review ranged from 2% for convexity meningiomas to 36% for basal meningiomas. Other relatively common complications were dural closure–related complications (1%–24%), postoperative peritumoral edema (2%–10%), early postoperative seizure (1%–12%), medical complications (6%–7%), wound infection (0%–4%), surgery-related hematoma (1%–2%), and wrong-site surgery.
Strategies to minimize risk of these events were evaluated. Prophylactic techniques for DVT have been widely demonstrated and confirmed, but adherence remains unstudied. The use of image guidance, intraoperative functional mapping, and real-time intraoperative MRI guidance can allow surgeons to maximize resection while preserving neurological function. Whether the extent of resection significantly correlates with improved overall outcomes remains controversial.
Discussion
A significant proportion of adverse events in intracranial neoplasm surgery may be avoidable by use of practices to encourage use of standardized protocols for DVT, seizure, and infection prophylaxis; intraoperative navigation among other steps; improved teamwork and communication; and concentrated volume and specialization. Systematic efforts to bundle such strategies may significantly improve patient outcomes.
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Affiliation(s)
- Judith M. Wong
- 1Department of Health Policy and Management, Harvard School of Public Health
- 2Center for Surgery and Public Health and
- 3Departments of Neurosurgery,
| | - Jaykar R. Panchmatia
- 4Department of Orthopaedics and Trauma, Heatherwood and Wexham Park Hospitals, London, United Kingdom; and
| | - John E. Ziewacz
- 5Department of Neurosurgery, University of Michigan Health Systems, Ann Arbor, Michigan
| | - Angela M. Bader
- 1Department of Health Policy and Management, Harvard School of Public Health
- 2Center for Surgery and Public Health and
- 6Anesthesiology, Perioperative and Pain Medicine, and
| | | | | | - Atul A. Gawande
- 1Department of Health Policy and Management, Harvard School of Public Health
- 2Center for Surgery and Public Health and
- 7Surgery, Brigham and Women's Hospital, Boston, Massachusetts
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Wong JM, Governale LS, Friedlander RM. Use of a simple internal fiducial as an adjunct to enhance intraoperative ultrasound-assisted guidance: technical note. Neurosurgery 2011; 69:ons34-9; discussion ons39. [PMID: 21346649 DOI: 10.1227/neu.0b013e3182124851] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
Abstract
BACKGROUND Image-based navigational techniques have been used increasingly in neurosurgery to improve intraoperative precision. These techniques, however, have the disadvantage of inherent inaccuracies, which are significant especially when targeting small, subcortical lesions in eloquent areas. Intraoperative ultrasound serves as a useful, real-time adjunct to these techniques, but at times, precise correlation of the true anatomical location to the ultrasound image can be challenging. OBJECTIVE : To improve the accuracy and precision of intraoperative ultrasound by using a simple internal fiducial marker made from materials already present on the sterile field. METHODS We present 3 cases (2 cranial, 1 spinal) of small lesions with deep and eloquent locations. Magnetic resonance imaging (MRI)-based frameless stereotaxy or spinal fluoroscopy was used to modify the incision and to approximate the surgical trajectory, which was marked intradurally with a small piece of Gelfoam soaked in autologous blood. Ultrasound was used to visualize the echogenic lesion, and the precise trajectory was then refined using the echogenic blood-soaked Gelfoam on the cortical or spinal cord surface. RESULTS In all 2 patients, the combined use of MRI-based frameless stereotaxy (cranial cases only) and ultrasound guidance minimized dissection through normal tissue. All cases resulted in a gross total resection and no added long-term surgical morbidity. CONCLUSION We describe a neuronavigational tool to aid in the precise localization of a subcortical or spinal lesion, particularly one that is small and in close proximity to eloquent areas.
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Affiliation(s)
- Judith M Wong
- Department of Neurosurgery, Brigham and Women's Hospital, Boston, Massachusetts, USA
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Lee JD, Huang CH, Wang ST, Lin CW, Lee ST. Fast-MICP for frameless image-guided surgery. Med Phys 2010; 37:4551-9. [PMID: 20964172 DOI: 10.1118/1.3470097] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE In image-guided surgery (IGS) systems, image-to-physical registration is critical for reliable anatomical information mapping and spatial guidance. Conventional stereotactic frame-based or fiducial-based approaches provide accurate registration but are not patient-friendly. This study proposes a frameless cranial IGS system that uses computer vision techniques to replace the frame or fiducials with the natural features of the patient. METHODS To perform a cranial surgery with the proposed system, the facial surface of the patient is first reconstructed by stereo vision. Accuracy is ensured by capturing parallel-line patterns projected from a calibrated LCD projector. Meanwhile, another facial surface is reconstructed from preoperative computed tomography (CT) images of the patient. The proposed iterative closest point (ICP)-based algorithm [fast marker-added ICP (Fast-MICP)] is then used to register the two facial data sets, which transfers the anatomical information from the CT images to the physical space. RESULTS Experimental results reveal that the Fast-MICP algorithm reduces the computational cost of marker-added ICP (J.-D. Lee et al., "A coarse-to-fine surface registration algorithm for frameless brain surgery," in Proceedings of International Conference of the IEEE Engineering in Medicine and Biology Society, 2007, pp. 836-839) to 10% and achieves comparable registration accuracy, which is under 3 mm target registration error (TRE). Moreover, two types of optical-based spatial digitizing devices can be integrated for further surgical navigation. Anatomical information or image-guided surgical landmarks can be projected onto the patient to obtain an immersive augmented reality environment. CONCLUSION The proposed frameless IGS system with stereo vision obtains TRE of less than 3 mm. The proposed Fast-MICP registration algorithm reduces registration time by 90% without compromising accuracy.
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Affiliation(s)
- Jiann-Der Lee
- Department of Electrical Engineering, Chang Gung University, Tao-Yuan 333, Taiwan
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10
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OHUE S, KUMON Y, NAGATO S, KOHNO S, HARADA H, NAKAGAWA K, KIKUCHI K, MIKI H, OHNISHI T. Evaluation of Intraoperative Brain Shift Using an Ultrasound-Linked Navigation System for Brain Tumor Surgery. Neurol Med Chir (Tokyo) 2010; 50:291-300. [DOI: 10.2176/nmc.50.291] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Affiliation(s)
- Shiro OHUE
- Department of Neurosurgery, Ehime University Graduate School of Medicine
| | - Yoshiaki KUMON
- Department of Neurosurgery, Ehime University Graduate School of Medicine
| | - Shigeyuki NAGATO
- Department of Neurosurgery, Ehime University Graduate School of Medicine
| | - Shohei KOHNO
- Department of Neurosurgery, Ehime University Graduate School of Medicine
| | - Hironobu HARADA
- Department of Neurosurgery, Ehime University Graduate School of Medicine
| | - Kou NAKAGAWA
- Department of Neurosurgery, Ehime University Graduate School of Medicine
| | - Keiichi KIKUCHI
- Department of Radiology, Ehime University Graduate School of Medicine
| | - Hitoshi MIKI
- Department of Radiology, Ehime University Graduate School of Medicine
| | - Takanori OHNISHI
- Department of Neurosurgery, Ehime University Graduate School of Medicine
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11
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Ji S, Hartov A, Roberts D, Paulsen K. Data assimilation using a gradient descent method for estimation of intraoperative brain deformation. Med Image Anal 2009; 13:744-56. [PMID: 19647473 DOI: 10.1016/j.media.2009.07.002] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2007] [Revised: 06/28/2009] [Accepted: 07/02/2009] [Indexed: 11/24/2022]
Abstract
Biomechanical models that simulate brain deformation are gaining attention as alternatives for brain shift compensation. One approach, known as the "forced-displacement method", constrains the model to exactly match the measured data through boundary condition (BC) assignment. Although it improves model estimates and is computationally attractive, the method generates fictitious forces and may be ill-advised due to measurement uncertainty. Previously, we have shown that by assimilating intraoperatively acquired brain displacements in an inversion scheme, the Representer algorithm (REP) is able to maintain stress-free BCs and improve model estimates by 33% over those without data guidance in a controlled environment. However, REP is computationally efficient only when a few data points are used for model guidance because its costs scale linearly in the number of data points assimilated, thereby limiting its utility (and accuracy) in clinical settings. In this paper, we present a steepest gradient descent algorithm (SGD) whose computational complexity scales nearly invariantly with the number of measurements assimilated by iteratively adjusting the forcing conditions to minimize the difference between measured and model-estimated displacements (model-data misfit). Solutions of full linear systems of equations are achieved with a parallelized direct solver on a shared-memory, eight-processor Linux cluster. We summarize the error contributions from the entire process of model-updated image registration compensation and we show that SGD is able to attain model estimates comparable to or better than those obtained with REP, capturing about 74-82% of tumor displacement, but with a computational effort that is significantly less (a factor of 4-fold or more reduction relative to REP) and nearly invariant to the amount of sparse data involved when the number of points assimilated is large. Based on five patient cases, an average computational cost of approximately 2 min for estimating whole-brain deformation has been achieved with SGD using 100 sparse data points, suggesting the new algorithm is sufficiently fast with adequate accuracy for routine use in the operating room (OR).
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Affiliation(s)
- Songbai Ji
- Thayer School of Engineering, Dartmouth College, Hanover, NH 03755, USA.
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12
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Ponsky LE, Mahadevan A, Gill IS, Djemil T, Novick AC. Renal radiosurgery: initial clinical experience with histological evaluation. Surg Innov 2008; 14:265-9. [PMID: 18178914 DOI: 10.1177/1553350607310546] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The purpose of this study was to determine whether radiosurgical technology can be safely applied to renal tumors. Patients received radiosurgical treatment of renal lesions. At 8 weeks after radiosurgical treatment, patients underwent a partial or radical nephrectomy and histologic evaluation. The patients received a radiation dose of 4 Gy per fraction for 4 fractions. Patients were followed, and radiation-induced toxicities were noted. Three patients were treated for a minimum of 1 year of follow-up. All patients completed the treatments, tolerating each of the 4 fractions with no adverse events. No acute toxicities or changes in renal function were noted. None of the patients had any evidence of acute radiation injury or toxicity noted at the time of surgery or within the subsequent 12 months after the radiosurgical treatment. The last patient treated was found to have a cavity with no microscopic evidence of viable tumor after radiosurgical treatment; pathology was consistent with necrotic renal cell carcinoma, papillary type. The other 2 tumors demonstrated pathologic evidence of viable renal cell carcinoma (grade I and grade II). Tumor size remained relatively unchanged for 8 weeks after the radiosurgical treatment in all patients. The authors are extremely encouraged and cautiously optimistic with the initial results. Radiosurgery for renal tumors appears to be safe at this initial dose level.
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Affiliation(s)
- Lee E Ponsky
- Center for Urologic Oncology and Minimally Invasive Therapies, University Hospitals Case Medical Center, Cleveland, OH 44106, USA.
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Krempien R, Hoppe H, Kahrs L, Daeuber S, Schorr O, Eggers G, Bischof M, Munter MW, Debus J, Harms W. Projector-based augmented reality for intuitive intraoperative guidance in image-guided 3D interstitial brachytherapy. Int J Radiat Oncol Biol Phys 2007; 70:944-52. [PMID: 18164834 DOI: 10.1016/j.ijrobp.2007.10.048] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2006] [Revised: 10/25/2007] [Accepted: 10/25/2007] [Indexed: 11/25/2022]
Abstract
PURPOSE The aim of this study is to implement augmented reality in real-time image-guided interstitial brachytherapy to allow an intuitive real-time intraoperative orientation. METHODS AND MATERIALS The developed system consists of a common video projector, two high-resolution charge coupled device cameras, and an off-the-shelf notebook. The projector was used as a scanning device by projecting coded-light patterns to register the patient and superimpose the operating field with planning data and additional information in arbitrary colors. Subsequent movements of the nonfixed patient were detected by means of stereoscopically tracking passive markers attached to the patient. RESULTS In a first clinical study, we evaluated the whole process chain from image acquisition to data projection and determined overall accuracy with 10 patients undergoing implantation. The described method enabled the surgeon to visualize planning data on top of any preoperatively segmented and triangulated surface (skin) with direct line of sight during the operation. Furthermore, the tracking system allowed dynamic adjustment of the data to the patient's current position and therefore eliminated the need for rigid fixation. Because of soft-part displacement, we obtained an average deviation of 1.1 mm by moving the patient, whereas changing the projector's position resulted in an average deviation of 0.9 mm. Mean deviation of all needles of an implant was 1.4 mm (range, 0.3-2.7 mm). CONCLUSIONS The developed low-cost augmented-reality system proved to be accurate and feasible in interstitial brachytherapy. The system meets clinical demands and enables intuitive real-time intraoperative orientation and monitoring of needle implantation.
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Affiliation(s)
- Robert Krempien
- Department of Radiation Oncology, University of Heidelberg, Heidelberg, Germany.
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14
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Reisner LA, King BW, Klein MD, Auner GW, Pandya AK. A prototype biosensor-integrated image-guided surgery system. Int J Med Robot 2007; 3:82-8. [PMID: 17441030 DOI: 10.1002/rcs.123] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
BACKGROUND In this study we investigated the integration of a Raman spectroscopy-based biosensor with an image-guided surgery system. Such a system would provide a surgeon with both a diagnosis of the tissue being analysed (e.g. cancer) and localization information displayed within an imaging modality of choice. This type of mutual and registered information could lead to faster diagnoses and enable more accurate tissue resections. METHODS A test bed consisting of a portable Raman probe attached to a passively articulated mechanical arm was used to scan and classify objects within a phantom skull. RESULTS The prototype system was successfully able to track the Raman probe, classify objects within the phantom skull, and display the classifications on medical imaging data within a virtual reality environment. CONCLUSION We discuss the implementation of the integrated system, its accuracy and improvements to the system that will enhance its usefulness and further the field of sensor-based computer-assisted surgery.
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Affiliation(s)
- L A Reisner
- Department of Electrical and Computer Engineering, Wayne State University, Detroit, MI, USA
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15
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Yaqoob Z, Wu J, McDowell EJ, Heng X, Yang C. Methods and application areas of endoscopic optical coherence tomography. JOURNAL OF BIOMEDICAL OPTICS 2006; 11:063001. [PMID: 17212523 DOI: 10.1117/1.2400214] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
We review the current state of research in endoscopic optical coherence tomography (OCT). We first survey the range of available endoscopic optical imaging techniques. We then discuss the various OCT-based endoscopic methods that have thus far been developed. We compare the different endoscopic OCT methods in terms of their scan performance. Next, we examine the application range of endoscopic OCT methods. In particular, we look at the reported utility of the methods in digestive, intravascular, respiratory, urinary and reproductive systems. We highlight two additional applications--biopsy procedures and neurosurgery--where sufficiently compact OCT-based endoscopes can have significant clinical impacts.
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Affiliation(s)
- Zahid Yaqoob
- Engineering and Applied Sciences Division, Electrical Engineering Department, California Institute of Technology, Pasadena, California 91125, USA.
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16
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Verhey JF, Wisser J, Keller T, Westin CF, Kikinis R. Rigid overlay of volume sonography and MR image data of the female pelvic floor using a fiducial based alignment—feasibility due to a case series. Comput Med Imaging Graph 2005; 29:243-9. [PMID: 15890251 DOI: 10.1016/j.compmedimag.2004.10.006] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2004] [Accepted: 10/26/2004] [Indexed: 10/25/2022]
Abstract
The visual combination of different medical image acquisition techniques (modalities) can lead to new modalities with enhanced informative content. In this paper, we present an overlay technique of magnetic resonance (MR) and 3D US image data sets of the female anal canal (internal and external sphincter) as a base for a new diagnostic modality. It is a new field of the application of the overlay technique. Three corresponding MR and US volume data sets from the female pelvic floor region were filtered using adaptive filtering techniques and overlayed (=registered rigidly) with a landmark based alignment method.
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Affiliation(s)
- Janko F Verhey
- Department of Medical Informatics, University of Goettingen, Robert-Koch-Str. 40, D-37075 Goettingen, Germany.
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17
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Verhey JF, Wisser J, Warfield SK, Rexilius J, Kikinis R. Non-rigid registration of a 3D ultrasound and a MR image data set of the female pelvic floor using a biomechanical model. Biomed Eng Online 2005; 4:19. [PMID: 15777475 PMCID: PMC1079899 DOI: 10.1186/1475-925x-4-19] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2005] [Accepted: 03/18/2005] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND The visual combination of different modalities is essential for many medical imaging applications in the field of Computer-Assisted medical Diagnosis (CAD) to enhance the clinical information content. Clinically, incontinence is a diagnosis with high clinical prevalence and morbidity rate. The search for a method to identify risk patients and to control the success of operations is still a challenging task. The conjunction of magnetic resonance (MR) and 3D ultrasound (US) image data sets could lead to a new clinical visual representation of the morphology as we show with corresponding data sets of the female anal canal with this paper. METHODS We present a feasibility study for a non-rigid registration technique based on a biomechanical model for MR and US image data sets of the female anal canal as a base for a new innovative clinical visual representation. RESULTS It is shown in this case study that the internal and external sphincter region could be registered elastically and the registration partially corrects the compression induced by the ultrasound transducer, so the MR data set showing the native anatomy is used as a frame for the US data set showing the same region with higher resolution but distorted by the transducer CONCLUSION The morphology is of special interest in the assessment of anal incontinence and the non-rigid registration of normal clinical MR and US image data sets is a new field of the adaptation of this method incorporating the advantages of both technologies.
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Affiliation(s)
- Janko F Verhey
- Department of Medical Informatics, University Hospital Goettingen, Germany
| | - Josef Wisser
- Department of Obstetrics, University Hospital Zuerich, Switzerland
| | - Simon K Warfield
- Surgical Planning Laboratory, Department of Radiology, Brigham and Women's Hospital, Boston, USA
| | - Jan Rexilius
- MeVis – Center for Medical Diagnostic Systems and Visualization, Bremen, Germany
| | - Ron Kikinis
- Surgical Planning Laboratory, Department of Radiology, Brigham and Women's Hospital, Boston, USA
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Letteboer MMJ, Willems PWA, Viergever MA, Niessen WJ. Brain Shift Estimation in Image-Guided Neurosurgery Using 3-D Ultrasound. IEEE Trans Biomed Eng 2005; 52:268-76. [PMID: 15709664 DOI: 10.1109/tbme.2004.840186] [Citation(s) in RCA: 101] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Intraoperative brain deformation is one of the most important causes affecting the overall accuracy of image-guided neurosurgical procedures. One option for correcting for this deformation is to acquire three-dimensional (3-D) ultrasound data during the operation and use this data to update the information provided by the preoperatively acquired MR data. For 12 patients 3-D ultrasound images have been reconstructed from freehand sweeps acquired during neurosurgical procedures. Ultrasound data acquired prior to and after opening the dura, but prior to surgery, have been quantitatively compared to the preoperatively acquired MR data to estimate the rigid component of brain shift at the first stages of surgery. Prior to opening the dura the average brain shift measured was 3.0 mm parallel to the direction of gravity, with a maximum of 7.5 mm, and 3.9 mm perpendicular to the direction of gravity, with a maximum of 8.2 mm. After opening the dura the shift increased on average 0.2 mm parallel to the direction of gravity and 1.4 mm perpendicular to the direction of gravity. Brain shift can be detected by acquiring 3-D ultrasound data during image-guided neurosurgery. Therefore, it can be used as a basis for correcting image data and preoperative planning for intraoperative deformations.
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Affiliation(s)
- Marloes M J Letteboer
- Image Sciences Institute, University Medical Center, 3584 CX Utrecht, The Netherlands.
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Krempien R, Hassfeld S, Kozak J, Tuemmler HP, Däuber S, Treiber M, Debus J, Harms W. Frameless image guidance improves accuracy in three-dimensional interstitial brachytherapy needle placement. Int J Radiat Oncol Biol Phys 2004; 60:1645-51. [PMID: 15590197 DOI: 10.1016/j.ijrobp.2004.07.670] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2002] [Revised: 07/01/2004] [Accepted: 07/07/2004] [Indexed: 11/28/2022]
Abstract
PURPOSE The aim of this work was to adapt a computer-assisted real-time three-dimensional (3D) navigation system for interstitial brachytherapy procedures. METHODS AND MATERIALS The 3-D navigation system Surgical Planning and Orientation Computer System (SPOCS; Aesculap, Tuttlingen, Germany) was adapted for use in interstitial brachytherapy. A special needle holder with mounted infrared-emitting diodes (IRED) for 3D navigation-based needle implantation was developed. Measurements were made on a series of different phantoms to study the feasibility and the overall accuracy and precision of the navigation system with regard to single-needle application and volume implants (multiple-needle implantations). In all, 250 single implants and 20 volume implants were performed. Accuracy was measured as the target registration error (TRE) between the preoperatively defined and the achieved target position. RESULTS Analyses of the 250 different targets showed a mean TRE for single-needle applications of 1.1 mm (SD +/- 0.4 mm), 0.9 mm (SD +/- 0.3 mm), and 0.7 mm (SD +/- 0.3 mm) in the x, y, and z direction, respectively. The maximal deviation was 2.3 mm. The corresponding TRE in the x, y, and z direction for volume implants was 1.6 mm (SD +/- 0.4 mm), 1.9 mm (SD +/- 0.6 mm), and 1.0 mm (SD +/- 0.4 mm), respectively. The maximum deviation was 2.9 mm. CONCLUSIONS The adaptation of a commercially available surgical planning and navigation system to interstitial brachytherapy is feasible. It enables virtual planning and improved accuracy in 3D interstitial needle implantation.
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Affiliation(s)
- Robert Krempien
- Department of Clinical Radiology, University of Heidelberg, Heidelberg, Germany.
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Lunn KE, Paulsen KD, Roberts DW, Kennedy FE, Hartov A, West JD. Displacement estimation with co-registered ultrasound for image guided neurosurgery: a quantitative in vivo porcine study. IEEE TRANSACTIONS ON MEDICAL IMAGING 2003; 22:1358-1368. [PMID: 14606670 DOI: 10.1109/tmi.2003.819293] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Brain shift during open cranial surgery presents a challenge for maintaining registration with image-guidance systems. Ultrasound (US) is a convenient intraoperative imaging modality that may be a useful tool in detecting tissue shift and updating preoperative images based on intraoperative measurements of brain deformation. We have quantitatively evaluated the ability of spatially tracked freehand US to detect displacement of implanted markers in a series of three in vivo porcine experiments, where both US and computed tomography (CT) image acquisitions were obtained before and after deforming the brain. Marker displacements ranged from 0.5 to 8.5 mm. Comparisons between CT and US measurements showed a mean target localization error of 1.5 mm, and a mean vector error for displacement of 1.1 mm. Mean error in the magnitude of displacement was 0.6 mm. For one of the animals studied, the US data was used in conjunction with a biomechanical model to nonrigidly re-register a baseline CT to the deformed brain. The mean error between the actual and deformed CT's was found to be on average 1.2 and 1.9 mm at the marker locations depending on the extent of the deformation induced. These findings indicate the potential accuracy in coregistered freehand US displacement tracking in brain tissue and suggest that the resulting information can be used to drive a modeling re-registration strategy to comparable levels of agreement.
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Affiliation(s)
- Karen E Lunn
- Thayer School of Engineering, Dartmouth College, Hanover, NH 03755 USA.
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