Molecular Logic Gates and Luminescent Sensors Based on Photoinduced Electron Transfer

Remarkably Selective Binding, Behavior Modification, and Switchable Release of (Bipyridine)3Ru(II) vis-à-vis (Phenanthroline)3Ru(II) by Trimeric Cyclophanes in Water

A recurring dream of molecular recognition is to create receptors that distinguish between closely related targets with sufficient accuracy, especially in water. The more useful the targets, the more valuable the dream becomes. We now present multianionic trimeric cyclophane receptors with a remarkable ability to bind the iconic (bipyridine)3Ru(II) (with its huge range of applications) while rejecting the nearly equally iconic (phenanthroline)3Ru(II). These receptors not only selectively capture (bipyridine)3Ru(II) but also can be redox-switched to release the guest. 1D- and 2D(ROESY)-NMR spectroscopy, luminescence spectroscopy, and molecular modeling enabled this discovery. This outcome allows the control of these applications, e.g., as a photocatalyst or as a luminescent sensor, by selectively hiding or exposing (bipyridine)3Ru(II). Overall, a 3D nanometric object is selected, picked-up, and dropped-off by a discrete molecular host. The multianionic receptors protect excited states of these metal complexes from phenolate quenchers so that the initial step in photocatalytic phenolate oxidation is retarded by nearly 2 orders of magnitude. This work opens the way for (bipyridine)3Ru(II) to be manipulated in the presence of other functional nano-objects so that many of its applications can be commanded and controlled. We have a cyclophane-based toolkit that can emulate some aspects of proteins that selectively participate in cell signaling and metabolic pathways by changing shape upon environmental commands being received at a location remote from the active site.

Design, Photochemistry, Logic Gates Behavior and Antibacterial Evaluation of ICT Systems based on 1,8-naphthalimides

Ace naphthene as a primary material was nitrated and further reacted by various processes such as oxidation, imidation and amination in order to obtain dyad 5. The dyad 5 fluoresces in solvents of different polarity and the emission is shifted bathochromically with increasing the solvent polarity due to ICT enhancement, The fluorescent enhancement is greatest in case of chloroform (Ф_F = 0.48) on excitation at 420 nm,The influences of the pH on dyad 5 were also investigated, The results can be considered as representing off-on-off states. Dyad 5 executes two input XNOR logic gates, towards H⁺ and HO^- ions, "off-on-off" switching behavior between H⁺ and HO^- ions was observed, The synthesized compounds were tested for antimicrobial activity of Gram-positive and Gram-negative bacteria, The compounds tested have a good antibacterial activity as compared with standard compound (Gentamycin).

A Personal Journey across Fluorescent Sensing and Logic Associated with Polymers of Various Kinds

Our experiences concerning fluorescent molecular sensing and logic devices and their intersections with polymer science are the foci of this brief review. Proton-, metal ion- and polarity-responsive cases of these devices are placed in polymeric micro- or nano-environments, some of which involve phase separation. This leads to mapping of chemical species on the nanoscale. These devices also take advantage of thermal properties of some polymers in water in order to reincarnate themselves as thermometers. When the phase separation leads to particles, the latter can be labelled with identification tags based on molecular logic. Such particles also give rise to reusable sensors, although molecular-scale resolution is sacrificed in the process. Polymeric nano-environments also help to organize rather complex molecular logic systems from their simple components. Overall, our little experiences suggest that researchers in sensing and logic would benefit if they assimilate polymer concepts.

On the Origins of Nonradiative Excited State Relaxation in Aryl Sulfoxides Relevant to Fluorescent Chemosensing

We provide herein a mechanistic analysis of aryl sulfoxide excited state processes, inspired by our recent report of aryl sulfoxide based fluorescent chemosensors. The use of aryl sulfoxides as reporting elements in chemosensor development is a significant deviation from previous approaches, and thus warrants closer examination. We demonstrate that metal ion binding suppresses nonradiative excited state decay by blocking formation of a previously unrecognized charge transfer excited state, leading to fluorescence enhancement. This charge transfer state derives from the initially formed locally excited state followed by intramolecular charge transfer to form a sulfoxide radical cation/aryl radical anion pair. With the aid of computational studies, we map out ground and excited state potential energy surface details for aryl sulfoxides, and conclude that fluorescence enhancement is almost entirely the result of excited state effects. This work expands previous proposals that excited state pyramidal inversion is the major nonradiative decay pathway for aryl sulfoxides. We show that pyramidal inversion is indeed relevant, but that an additional and dominant nonradiative pathway must also exist. These conclusions have implications for the design of next generation sulfoxide based fluorescent chemosensors.

Bright molecules for sensing, computing and imaging: a tale of two once-troubled cities

The circumstances in Colombo, Sri Lanka, and in Belfast, Northern Ireland, which led to a) the generalization of luminescent PET (photoinduced electron transfer) sensing/switching as a design tool, b) the construction of a market-leading blood electrolyte analyzer and c) the invention of molecular logic-based computation as an experimental field, are delineated. Efforts to extend the philosophy of these approaches into issues of small object identification, nanometric mapping, animal visual perception and visual art are also outlined.

Small molecular logic systems can draw the outlines of objects via edge visualization

The recently-discovered ability of small logical molecules to recognize edges is exploited to achieve outline drawing from binary templates. Outlines of arbitrary curvature, several colours and thicknesses down to 1 mm are drawn in around 30 min or less by employing a common laboratory two-colour ultraviolet lamp. The outlines and the light dose-driven XOR logic with fluorescence output or 'off-on-off' action which is observed in the irradiated regions are modelled by combining foundational principles of photochemistry, acid-base neutralization and diffusion.

A highly selective ratiometric fluorescent pH probe based on a PAMAM wavelength-shifting bichromophoric system

A novel PAMAM wavelength-shifting bichromophoric system has been successfully developed. Novel compound was configured as a light harvesting antenna where the system surface is labeled with yellow-green emitting 4-(N,N-dimethylamino)ethylamino-1,8-naphthalimide "donor" units capable of absorbing light and efficiently transferring the energy to a focal Rhodamine 6G "acceptor". The periphery of the system was designed on the "fluorophore-spacer-receptor" format, capable of acting as a molecular fluorescence photoinduced electron transfer based probe. Due to the both effects, photoinduced electron transfer in the periphery of the system and pH dependent rhodamine core absorption, novel antenna is able to act as a selective ratiometric pH fluorescence probe in aqueous medium. Thus, the distinguishing features of the fluorescence resonance energy transfer systems were successfully combined with the properties of classical ring-opening charge transfer systems, which may be beneficially for monitoring pH variations in complex samples.

Synthesis and sensor activity of a PET-based 1,8-naphthalimide Probe for Zn(2+) and pH determination

A novel blue-emitting 1,8-naphthalimide fluorophore designed as a molecular PET-based probe for determination of pH and detection of transition metal ions in the environment was successfully synthesized. Novel compound was configured on the "fluorophore-spacer-receptor" format. Due to the tertiary amine receptor the novel system showed "off-on" switching properties under the transition from alkaline to acid media (FE = 3.2) and in the presence of Zn(2+) ions (FE = 2.5). The results obtained illustrate the high potential of the synthesized blue-emitting 1,8-naphthalimide fluorophore as an efficient pH chemosensing material and a selective probe for Zn(2+) ions.

Ultrafast photochemistry in liquids

Ultrafast photochemical processes can occur in parallel with the relaxation of the optically populated excited state toward equilibrium. The latter involves both intra- and intermolecular modes, namely vibrational and solvent coordinates, and takes place on timescales ranging from a few tens of femtoseconds to up to hundreds of picoseconds, depending on the system. As a consequence, the reaction dynamics can substantially differ from those usually measured with slower photoinduced processes occurring from equilibrated excited states. For example, the decay of the excited-state population may become strongly nonexponential and depend on the excitation wavelength, contrary to the Kasha and Vavilov rules. In this article, we first give a brief account of our current understanding of vibrational and solvent relaxation processes. We then present an overview of important classes of ultrafast photochemical reactions, namely electron and proton transfer as well as isomerization, and illustrate with several examples how nonequilibrium effects can affect their dynamics.

Sensor activity and logic behaviour of PET based dihydroimidazonaphthalimide diester

An ester terminated dihydroimidazonaphthalimide as multi-functional logic device is presented. Due to the optical changes as a function of pH this simple molecule is able to act as a molecular pH metre, a digital comparator and a half-adder. It was demonstrated that the dihydroimidazonaphthalimide comparator could be used as a fundamental element of an optical device for control of pH windows. Also, the ability of the device to detect metal ions in DMF and in water/DMF (3:1, v/v) at different pHs has been evaluated by monitoring the changes of its fluorescence intensity. Among the tested metal ions (Cd(2+), Co(2+), Cu(2+), Fe(3+), Ni(2+), Pb(2+), Zn(2+), Bi(3+), Hg(2+) and Ag(+)) only Fe(3+) and Bi(3+) were efficiently detected. In water/DMF (3:1, v/v) XOR and XNOR logic gates are presented using pH and Fe(3+) as chemical inputs based on encoding binary digits of logical conventions.