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Ji-Min J. M. Yan Y, Williams DE. Quantum-chemical investigation on hydrogen bonding interaction of hydrogen fluoride dimer at various mutual orientations. CHINESE J CHEM 2011. [DOI: 10.1002/cjoc.19900080103] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Pennanen TS, Lantto P, Hakala M, Vaara J. Nuclear magnetic resonance parameters in water dimer. Theor Chem Acc 2010. [DOI: 10.1007/s00214-010-0782-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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3
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Devyatykh GG, Sennikov PG. Spectroscopic determination and study of the molecular state of water in ultrapure volatile inorganic substances. RUSSIAN CHEMICAL REVIEWS 2007. [DOI: 10.1070/rc1995v064n09abeh000178] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Van Lenthe JH, Duijneveldt-Van Devan Rijdt JGCM, Van Duijneveldt FB. Weakly Bonded Systems. ADVANCES IN CHEMICAL PHYSICS 2007. [DOI: 10.1002/9780470142943.ch9] [Citation(s) in RCA: 163] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/12/2023]
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Weinhold F. Resonance Character of Hydrogen-bonding Interactions in Water and Other H-bonded Species. ADVANCES IN PROTEIN CHEMISTRY 2005; 72:121-55. [PMID: 16581375 DOI: 10.1016/s0065-3233(05)72005-2] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Hydrogen bonding underlies the structure of water and all biochemical processes in aqueous medium. Analysis of modern ab initio wave functions in terms of natural bond orbitals (NBOs) strongly suggests the resonance-type "charge transfer" (CT) character of H-bonding, contrary to the widely held classical-electrostatic viewpoint that underlies current molecular dynamics (MD) modeling technology. Quantum cluster equilibrium (QCE) theory provides an alternative ab initio-based picture of liquid water that predicts proton-ordered two-coordinate H-bonding patterns, dramatically different from the ice-like picture of electrostatics-based MD simulations. Recent X-ray absorption and Raman scattering experiments of Nilsson and co-workers confirm the microstructural two-coordinate picture of liquid water. We show how such cooperative "unsaturated" ring/chain topologies arise naturally from the fundamental resonance-CT nature of B:cdots, three dots, centeredHA hydrogen bonding, which is expressed in NBO language as n(B)-->sigma(AH)(*) intermolecular delocalization from a filled lone pair n(B) of the Lewis base (B:) into the proximal antibond sigma(AH)(*) of the Lewis acid (HA). Stabilizing n(O)-->sigma(OH)(*) orbital delocalization, equivalent to partial mixing of resonance structures H(2)O:cdots, three dots, centeredHOH H(3)O(+) cdots, three dots, centered(-):OH, is thereby seen to be the electronic origin of general enthalpic and entropic propensities that favor relatively small cyclic clusters such as water pentamers W(5c) in the QCE liquid phase. We also discuss the thermodynamically competitive three-coordinate clusters (e.g., icosahedral water buckyballs, W(24)), which appear to play a role in hydrophobic solvation phenomena. We conclude with suggestions for incorporating resonance-CT aspects of H-bonding into empirical MD simulation potentials in a computationally tractable manner.
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Affiliation(s)
- F Weinhold
- Theoretical Chemistry Institute and Department of Chemistry, University of Wisconsin, Madison, Wisconsin 53706
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Balasubramanian K. Nonrigid Group Theory, Tunneling Splittings, and Nuclear Spin Statistics of Water Pentamer: (H2O)5. J Phys Chem A 2004. [DOI: 10.1021/jp049955k] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- K. Balasubramanian
- Center for Image Processing and Integrated Computing, University of California Davis, Livermore, California 94550, University of California, Chemistry and Material Science Directorate, Lawrence Livermore National Laboratory, Livermore, California 94550, and Glenn T Seaborg Center, Lawrence Berkeley Laboratory, University of California, Berkeley, California 94720
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Balasubramanian K. Relativistic double group spinor representations of nonrigid molecules. J Chem Phys 2004; 120:5524-35. [PMID: 15267428 DOI: 10.1063/1.1648636] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The character theory of relativistic double group spinor representations is developed in order to represent the total rovibronic states of nonrigid molecules. It is shown that the double groups can be represented in terms of wreath products and powerful matrix cycle type generators that are used to construct their character tables. It is shown that these tables are of use when spin-orbit coupling is included in the Hamiltonian even for molecules containing lighter atoms. Applications to nonrigid molecules such as Tl2H4/Tl2H4+ are considered. It is shown that the tunneling splittings and the nuclear spin statistical weights can be obtained for such species using the character tables thus constructed. The spinor double groups of several other molecules such as hexamethyl dilead and heavy weakly bound clusters such as (PoH2)4 are also considered.
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Affiliation(s)
- K Balasubramanian
- Center for Image Processing and Integrated Computing, University of California Davis, Livermore, California 94550, USA.
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Tao FM. Bond functions, basis set superposition errors and other practical issues with ab initio calculations of intermolecular potentials. INT REV PHYS CHEM 2001. [DOI: 10.1080/01442350110071957] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Mielke Z, Latajka Z, Olbert-Majkut A, Wieczorek R. Matrix Infrared Spectra and ab Initio Calculations of the Nitrous Acid Complexes with Nitrogen Monoxide†. J Phys Chem A 2000. [DOI: 10.1021/jp993889i] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Legon AC. Präreaktive Komplexe der Dihalogene XY mit Lewis-Basen B in der Gasphase: eine systematische Studie der Halogen-Analoga B⋅⋅⋅XY der Wasserstoffbrückenbindungen B⋅⋅⋅HX. Angew Chem Int Ed Engl 1999. [DOI: 10.1002/(sici)1521-3757(19990917)111:18<2850::aid-ange2850>3.0.co;2-6] [Citation(s) in RCA: 75] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Pratt DW. HIGH RESOLUTION SPECTROSCOPY IN THE GAS PHASE: Even Large Molecules Have Well-Defined Shapes. Annu Rev Phys Chem 1998; 49:481-530. [PMID: 15012435 DOI: 10.1146/annurev.physchem.49.1.481] [Citation(s) in RCA: 107] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
▪ Abstract A review of recent high-resolution microwave, infrared, and optical spectroscopy experiments demonstrates that remarkable progress has been made in the past 20 years in determining the equilibrium geometries of large polyatomic molecules and their clusters in the gas phase, and how these geometries change when the photon is absorbed. A special focus is on the dynamical information that can be obtained from such studies, particularly of electronically excited states.
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Affiliation(s)
- D W Pratt
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA. pratt+@pitt.edu
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Lundell J, Krajewska M, Räsänen M. Matrix isolation infrared and ab initio study of the 1:1 complex between ammonia and carbon monoxide. J Mol Struct 1998. [DOI: 10.1016/s0022-2860(98)00353-6] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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14
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Molecular force field development for saccharides using the SPASIBA spectroscopic potential. Force field parameters for α-d-glucose. ACTA ACUST UNITED AC 1997. [DOI: 10.1016/s0166-1280(97)00002-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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JANOSCHEK RUDOLF. Dynamically corrected ab initio minimum geometries and NMR chemical shifts for H bonded systems. Mol Phys 1996. [DOI: 10.1080/002689796173192] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
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16
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Legon A, Lister D. Bending force constants for weakly bound dimers AB (A, symmetric top; B, linear molecule) from gas-phase nuclear quadrupole coupling constants. J Mol Struct 1996. [DOI: 10.1016/0022-2860(96)09236-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Sennikov PG, Shkrunin VE, Tokhadze KG. Weak Hydrogen Bonding in Ethanol and Water Solutions in Liquid Hydrides of Group IV−VI Elements (SiH4, GeH4, PH3, AsH3, H2S, and H2Se). 2. IR Spectroscopy of Hydrogen Bonding in Solutions Containing Water in Hydrides. ACTA ACUST UNITED AC 1996. [DOI: 10.1021/jp953246c] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- P. G. Sennikov
- Institute of Chemistry of High-Purity Substances, Russian Academy of Sciences, 49 Tropinin Street, GSP-75, Nizhny Novgorod 603600, Russia
| | - V. E. Shkrunin
- Institute of Chemistry of High-Purity Substances, Russian Academy of Sciences, 49 Tropinin Street, GSP-75, Nizhny Novgorod 603600, Russia
| | - K. G. Tokhadze
- Department of Physics, the University of St. Petersbourg, Petergof, St. Petersbourg 198904, Russia
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Are B…ClF bonds linear? The angular geometry of a pre-reactive complex of oxirane and chlorine monofluoride from rotational spectroscopy. Chem Phys Lett 1996. [DOI: 10.1016/0009-2614(96)00106-6] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Wu Q, Zhang DH, Zhang JZH. 6D quantum calculation of energy levels for HF stretching excited (HF)2. J Chem Phys 1995. [DOI: 10.1063/1.469676] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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von Dirke M, Bačić Z, Zhang DH, Zhang JZH. Vibrational predissociation of HF dimer in νHF=1: Influence of initially excited intermolecular vibrations on the fragmentation dynamics. J Chem Phys 1995. [DOI: 10.1063/1.469487] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Zhang DH, Wu Q, Zhang JZH, von Dirke M, Bačić Z. Exact full‐dimensional bound state calculations for (HF)2, (DF)2, and HFDF. J Chem Phys 1995. [DOI: 10.1063/1.468719] [Citation(s) in RCA: 121] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Zhang DH, Wu Q, Zhang JZH. A time‐dependent approach to flux calculation in molecular photofragmentation: Vibrational predissociation of HF–DF. J Chem Phys 1995. [DOI: 10.1063/1.469382] [Citation(s) in RCA: 52] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
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Gould IR, Hillier IH. The relation between hydrogen-bond strengths and vibrational frequency shifts: a theoretical study of complexes of oxygen and nitrogen proton acceptors and water. ACTA ACUST UNITED AC 1994. [DOI: 10.1016/0166-1280(94)03796-n] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Zhang DH, Zhang JZH. Photofragmentation of HF dimer: Quantum dynamics studies on ab initio potential energy surfaces. J Chem Phys 1993. [DOI: 10.1063/1.465854] [Citation(s) in RCA: 59] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Zhang DH, Zhang JZH. Total and partial decay widths in vibrational predissociation of HF dimer. J Chem Phys 1993. [DOI: 10.1063/1.464858] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Bohac EJ, Marshall MD, Miller RE. Initial state effects in the vibrational predissociation of hydrogen fluoride dimer. J Chem Phys 1992. [DOI: 10.1063/1.462578] [Citation(s) in RCA: 126] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Held A, Pratt DW. Hydrogen bonding in the symmetry‐equivalent C2h dimer of 2‐pyridone in its S0 and S2 electronic states. Effect of deuterium substitution. J Chem Phys 1992. [DOI: 10.1063/1.462777] [Citation(s) in RCA: 77] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Balasubramanian K. Group theory and nuclear spin statistics of weakly‐bound (H2O)n, (NH3)n, (CH4)n, and NH+4(NH3)n. J Chem Phys 1991. [DOI: 10.1063/1.461307] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Slanina Z. Computational studies of water clusters: temperature, pressure, and saturation effects on cluster fractions within the RRHO MCY-B/EPEN steam. J Mol Struct 1990. [DOI: 10.1016/0022-2860(90)80132-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Scheiner S. AB initio studies of the structure, energetics and vibrational spectra of hydrogen bonded systems. ACTA ACUST UNITED AC 1989. [DOI: 10.1016/0166-1280(89)87015-0] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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36
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Vibrational spectra of (HF)2, (HF)n and their D-isotopomers: Mode selective rearrangements and nonstatistical unimolecular decay. Chem Phys 1989. [DOI: 10.1016/0301-0104(89)90003-7] [Citation(s) in RCA: 111] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Bumgarner R, Blake GA. Microwave direct absorption spectroscopy of weakly-bound clusters in a planar supersonic jet: Spectra of Ar-HCN and (HCN)2 from 17.4 to 76.7 GHz. Chem Phys Lett 1989. [DOI: 10.1016/0009-2614(89)85090-0] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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DeHaan DO, Zwier TS. Hindered internal rotation andortho‐H2enrichment intrans‐stilbene–H2/D2complexes. J Chem Phys 1989. [DOI: 10.1063/1.456088] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Martin PS, Yates K, Csizmadia IG. A theoretical study of excited state proton transfer to phenylacetylene and within o-hydroxy-phenylacetylene. ACTA ACUST UNITED AC 1989. [DOI: 10.1016/0166-1280(89)80009-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Blake GA, Busarow KL, Cohen RC, Laughlin KB, Lee YT, Saykally RJ. Tunable far‐infrared laser spectroscopy of hydrogen bonds: The Ka =0(u)→1(g) rotation–tunneling spectrum of the HCl dimer. J Chem Phys 1988. [DOI: 10.1063/1.455380] [Citation(s) in RCA: 73] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Ruoff RS, Emilsson T, Klots TD, Chuang C, Gutowsky HS. Rotational spectrum and structure of the linear HCN trimer. J Chem Phys 1988. [DOI: 10.1063/1.455515] [Citation(s) in RCA: 86] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Abstract
A growing number of binary and tertiary van der Waals and hydrogen-bonded complexes are being studied by means of near-infrared laser spectroscopy. Studies of this type have generated a wealth of detailed structural and dynamical information that provides exacting tests of the corresponding theoretical methods. An additional incentive for the investigation of such clusters arises from the fact that they may be considered as intermediates between the gas and condensed phases of matter. As a result, these systems represent a fertile meeting ground for researchers from both fields and can often be studied with a variety of methods.
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Rhee SK, Karpfen A. Ab initio studies on hydrogen-bonded clusters. II. Structures and vibrational spectra of the hydrogen-bonded trimers (HCN)2HF, (HCN2)HCl, (NCH)2OH2 AND (NCH)2NH3. Chem Phys 1988. [DOI: 10.1016/0301-0104(88)87166-0] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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46
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Latajka Z, Scheiner S. Structure, energetics, and vibrational spectrum of H2O–HCl. J Chem Phys 1987. [DOI: 10.1063/1.453516] [Citation(s) in RCA: 61] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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48
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Robinson RL, Gwo D, Saykally RJ. The high‐resolution far infrared spectrum of a van der Waals stretching vibration: The ν3 band of Ar–HCl. J Chem Phys 1987. [DOI: 10.1063/1.453684] [Citation(s) in RCA: 59] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Kofranek M, Karpfen A, Lischka H. Ab initio studies on hydrogen-bonded clusters. I. Linear and cyclic oligomers of hydrogen cyanide. Chem Phys 1987. [DOI: 10.1016/0301-0104(87)80219-7] [Citation(s) in RCA: 79] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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