Lipids and Macromolecular Lipids of the Hydrocarbon-rich Microalga Botryococcus braunii. Chemical Structure and Biosynthesis. Geochemical and Biotechnological Importance

Fundamentals in applications of algae biomass: A review

Algae play an extremely important ecological role. They form the basis of trophic webs, produce oxygen that allows the respiration of many of the organisms in aquatic environments, absorb CO₂, and serve as refuge areas and habitats for thousands of species. Many species can also absorb organic pollutants from seawater. Algae have been used for many centuries by humans as a source of food, fertilizer, fodder, and for the extraction of compounds with antifungal, antiviral, anticancer, and antibacterial properties. More recently, some species have been used for the production of biofuels. It has been shown that mixing small proportions of algae with the feed of cattle can reduce methane emissions from their digestive activity by more than 95%. One of the most widespread but least known applications of algae is the extraction of their phycocolloids for utilization in food, pharmaceutical, wine, and textile industries, among others. These compounds have gelling, stabilizing, and thickening properties and are therefore frequently included in creams, ice creams, cheeses, jellies, flavored milks, sauces, shampoos, medications, toothpaste, and many other products. The phycocolloids agar and carrageenan are extracted from red algae, whereas alginate is extracted from brown algae, being used in dental impressions, emulsifying lotions, and paints, among others, and in the preparation of wine and beer. Algae are of particular interest in the research and development of new biosorbent materials, not only because of their high adsorption capacity, but also because they are present in the seas and oceans in abundant and easily accessible quantities. Marine algae are a promising biosorbent for the removal of heavy metals and various pollutants and, due to their intrinsic characteristics, have received increasing attention in recent decades. Their application as biosorbents for the sorption of heavy metals and radionuclides could be interpreted as the use of waste to remove waste. Algae have attracted particular interest in the field of biotechnology for economic reasons, given that large amounts are naturally produced and left lying on beaches as waste material. The composition of algae biomass makes it a promising candidate for an extensive list of applications that continues to lengthen. The development of appropriate technologies and policies can transform the presence of algae in coastal ecosystems from an unpleasant and potentially harmful phenomenon into a source of major benefits. This review discusses the capacity of algae biomass to remove pollutants and also delves into its applicability in the production of dyes, oils, and biofuels and for animal feed and fertilizer industries, among others. Further research is warranted on strategies to convert a biomass that is currently considered waste into a means of addressing environmental problems.

Comprehensive Metabolic and Taxonomic Reconstruction of an Ancient Microbial Mat From the McMurdo Ice Shelf (Antarctica) by Integrating Genetic, Metaproteomic and Lipid Biomarker Analyses

Paleobiological reconstructions based on molecular fossils may be limited by degradation processes causing differential preservation of biomolecules, the distinct taxonomic specificity of each biomolecule type, and analytical biases. Here, we combined the analysis of DNA, proteins and lipid biomarkers using 16S and 18S rRNA gene metabarcoding, metaproteomics and lipid analysis to reconstruct the taxonomic composition and metabolisms of a desiccated microbial mat from the McMurdo Ice Shelf (MIS) (Antarctica) dated ~1,000 years BP. The different lability, taxonomic resolution and analytical bias of each biomolecule type led to a distinct microbial community profile. DNA analysis showed selective preservation of DNA remnants from the most resistant taxa (e.g., spore-formers). In contrast, the proteins profile revealed microorganisms missed by DNA sequencing, such as Cyanobacteria, and showed a microbial composition similar to fresh microbial mats in the MIS. Lipid hydrocarbons also confirmed Cyanobacteria and suggested the presence of mosses or vascular plant remnants from a period in Antarctica when the climate was warmer (e.g., Mid-Miocene or Eocene). The combined analysis of the three biomolecule types also revealed diverse metabolisms that operated in the microbial mat before desiccation: oxygenic and anoxygenic photosynthesis, nitrogen fixation, nitrification, denitrification, sulfur reduction and oxidation, and methanogenesis. Therefore, the joint analysis of DNA, proteins and lipids resulted in a powerful approach that improved taxonomic and metabolic reconstructions overcoming information gaps derived from using individual biomolecules types.

Palaeogenomics of the Hydrocarbon Producing Microalga Botryococcus braunii

Botryococcus braunii is a colonial microalga that appears early in the fossil record and is a sensitive proxy of environmental and hydroclimatic conditions. Palaeozoic Botryococcus fossils which contribute up to 90% of oil shales and approximately 1% of crude oil, co-localise with diagnostic geolipids from the degradation of source-signature hydrocarbons. However more recent Holocene sediments demonstrate no such association. Consequently, Botryococcus are identified in younger sediments by morphology alone, where potential misclassifications could lead to inaccurate paleoenvironmental reconstructions. Here we show that a combination of flow cytometry and ancient DNA (aDNA) sequencing can unambiguously identify Botryococcus microfossils in Holocene sediments with hitherto unparalleled accuracy and rapidity. The application of aDNA sequencing to microfossils offers a far-reaching opportunity for understanding environmental change in the recent geological record. When allied with other high-resolution palaeoenvironmental information such as aDNA sequencing of humans and megafauna, aDNA from microfossils may allow a deeper and more precise understanding of past environments, ecologies and migrations.

Resistant biomacromolecules as major contributors to kerogen

Current research concerning the chemical characterization of organic macromolecules present in wellpreserved fossilized materials with known morphologies revealed by (electron) microscopic studies results in the recognition of unknown, resistant biomacromolecules in a variety of organisms. It is shown that highly aliphatic, non-saponifiable biomacromolecules in cell walls of algae (algaenans) have unique structures, probably as a result of different biosynthetic pathways and that they consist of n -alkyl-, isoprenoid and tricyclic alkyl units. It is also becoming clear that algaenans are structurally different from the highly aliphatic, non-saponifiable biomacromolecules occurring in plant cuticles (cutans), periderm tissue (suberans), some sporopollenins and in tegmens of seeds of water plants. All these types of aliphatic biomacromolecules are highly resistant and therefore selectively preserved in the geosphere. In particular, Type I and II kerogens consist mainly, in some cases exclusively, of these aliphatic biomacromolecules. Polysesquiterpenoids and polyditerpenoids occur in fresh and fossil angiosperm and gymnosperm resins respectively and also show resistant behaviour in the geosphere. Some waxy crude oils contain large amounts of compounds derived from these substances after thermal cracking. A completely new polyphenol type of biomacromolecule was encountered in several fossilized outer walls of seeds (testae) of water plants. Preliminary results indicate that this phenolic biomacromolecule is an alternative source of phenolic moieties in lignites and coals. The significance of lignin as a source of phenolic moieties in subsurface organic matter (e.g. vitrinites) is probably overestimated.