1
|
Bloom AJ, Lancaster KM. Manganese binding to Rubisco could drive a photorespiratory pathway that increases the energy efficiency of photosynthesis. NATURE PLANTS 2018; 4:414-422. [PMID: 29967515 DOI: 10.1038/s41477-018-0191-0] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/07/2017] [Accepted: 06/01/2018] [Indexed: 05/18/2023]
Abstract
Most plants, contrary to popular belief, do not waste over 30% of their photosynthate in a futile cycle called photorespiration. Rather, the photorespiratory pathway generates additional malate in the chloroplast that empowers many energy-intensive chemical reactions, such as those involved in nitrate assimilation. Thus, the balance between carbon fixation and photorespiration determines the plant carbon-nitrogen balance and protein concentrations. Plant protein concentrations, in turn, depend not only on the relative concentrations of carbon dioxide and oxygen in the chloroplast but also on the relative activities of magnesium and manganese, which are metals that associate with several key enzymes in the photorespiratory pathway and alter their function. Understanding the regulation of these processes is critical for sustaining food quality under rising CO2 atmospheres.
Collapse
Affiliation(s)
- Arnold J Bloom
- Department of Plant Sciences, University of California at Davis, Davis, CA, USA.
| | - Kyle M Lancaster
- Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA
| |
Collapse
|
2
|
Characterization of the heterooligomeric red-type rubisco activase from red algae. Proc Natl Acad Sci U S A 2016; 113:14019-14024. [PMID: 27872295 DOI: 10.1073/pnas.1610758113] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
Abstract
The photosynthetic CO2-fixing enzyme ribulose 1,5-bisphosphate carboxylase/oxygenase (rubisco) is inhibited by nonproductive binding of its substrate ribulose-1,5-bisphosphate (RuBP) and other sugar phosphates. Reactivation requires ATP-hydrolysis-powered remodeling of the inhibited complexes by diverse molecular chaperones known as rubisco activases (Rcas). Eukaryotic phytoplankton of the red plastid lineage contain so-called red-type rubiscos, some of which have been shown to possess superior kinetic properties to green-type rubiscos found in higher plants. These organisms are known to encode multiple homologs of CbbX, the α-proteobacterial red-type activase. Here we show that the gene products of two cbbX genes encoded by the nuclear and plastid genomes of the red algae Cyanidioschyzon merolae are nonfunctional in isolation, but together form a thermostable heterooligomeric Rca that can use both α-proteobacterial and red algal-inhibited rubisco complexes as a substrate. The mechanism of rubisco activation appears conserved between the bacterial and the algal systems and involves threading of the rubisco large subunit C terminus. Whereas binding of the allosteric regulator RuBP induces oligomeric transitions to the bacterial activase, it merely enhances the kinetics of ATP hydrolysis in the algal enzyme. Mutational analysis of nuclear and plastid isoforms demonstrates strong coordination between the subunits and implicates the nuclear-encoded subunit as being functionally dominant. The plastid-encoded subunit may be catalytically inert. Efforts to enhance crop photosynthesis by transplanting red algal rubiscos with enhanced kinetics will need to take into account the requirement for a compatible Rca.
Collapse
|
3
|
Lin H, Karki S, Coe RA, Bagha S, Khoshravesh R, Balahadia CP, Ver Sagun J, Tapia R, Israel WK, Montecillo F, de Luna A, Danila FR, Lazaro A, Realubit CM, Acoba MG, Sage TL, von Caemmerer S, Furbank RT, Cousins AB, Hibberd JM, Quick WP, Covshoff S. Targeted Knockdown of GDCH in Rice Leads to a Photorespiratory-Deficient Phenotype Useful as a Building Block for C4 Rice. PLANT & CELL PHYSIOLOGY 2016; 57:919-32. [PMID: 26903527 DOI: 10.1093/pcp/pcw033] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2015] [Accepted: 02/10/2016] [Indexed: 05/07/2023]
Abstract
The glycine decarboxylase complex (GDC) plays a critical role in the photorespiratory C2 cycle of C3 species by recovering carbon following the oxygenation reaction of ribulose-1,5-bisphosphate carboxylase/oxygenase. Loss of GDC from mesophyll cells (MCs) is considered a key early step in the evolution of C4 photosynthesis. To assess the impact of preferentially reducing GDC in rice MCs, we decreased the abundance of OsGDCH (Os10g37180) using an artificial microRNA (amiRNA) driven by a promoter that preferentially drives expression in MCs. GDC H- and P-proteins were undetectable in leaves of gdch lines. Plants exhibited a photorespiratory-deficient phenotype with stunted growth, accelerated leaf senescence, reduced chlorophyll, soluble protein and sugars, and increased glycine accumulation in leaves. Gas exchange measurements indicated an impaired ability to regenerate ribulose 1,5-bisphosphate in photorespiratory conditions. In addition, MCs of gdch lines exhibited a significant reduction in chloroplast area and coverage of the cell wall when grown in air, traits that occur during the later stages of C4 evolution. The presence of these two traits important for C4 photosynthesis and the non-lethal, down-regulation of the photorespiratory C2 cycle positively contribute to efforts to produce a C4 rice prototype.
Collapse
Affiliation(s)
- HsiangChun Lin
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines These authors contributed equally to this work
| | - Shanta Karki
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines These authors contributed equally to this work
| | - Robert A Coe
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines These authors contributed equally to this work
| | - Shaheen Bagha
- Department of Ecology & Evolutionary Biology, University of Toronto, Toronto, M5S 3B2, Canada
| | - Roxana Khoshravesh
- Department of Ecology & Evolutionary Biology, University of Toronto, Toronto, M5S 3B2, Canada
| | - C Paolo Balahadia
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines
| | - Julius Ver Sagun
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines
| | - Ronald Tapia
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines
| | - W Krystler Israel
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines
| | | | - Albert de Luna
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines
| | - Florence R Danila
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines
| | - Andrea Lazaro
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines
| | - Czarina M Realubit
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines
| | - Michelle G Acoba
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines
| | - Tammy L Sage
- Department of Ecology & Evolutionary Biology, University of Toronto, Toronto, M5S 3B2, Canada
| | - Susanne von Caemmerer
- ARC Centre of Excellence for Translational Photosynthesis, Research School of Biology, The Australian National University, Acton, 2601, Australia
| | - Robert T Furbank
- ARC Centre of Excellence for Translational Photosynthesis, Research School of Biology, The Australian National University, Acton, 2601, Australia
| | - Asaph B Cousins
- School of Biological Sciences, Molecular Plant Sciences, Washington State University, Pullman, WA 99164-4236, USA
| | - Julian M Hibberd
- Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK
| | - W Paul Quick
- C4 Rice Center, International Rice Research Institute, Los Baños, Philippines Department of Animal and Plant Sciences, University of Sheffield, Sheffield S10 2TN, UK
| | - Sarah Covshoff
- Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK
| |
Collapse
|
4
|
Munekage YN, Taniguchi YY. Promotion of Cyclic Electron Transport Around Photosystem I with the Development of C4 Photosynthesis. PLANT & CELL PHYSIOLOGY 2016; 57:897-903. [PMID: 26893472 DOI: 10.1093/pcp/pcw012] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2015] [Accepted: 01/11/2016] [Indexed: 06/05/2023]
Abstract
C4 photosynthesis is present in approximately 7,500 species classified into 19 families, including monocots and eudicots. In the majority of documented cases, a two-celled CO2-concentrating system that uses a metabolic cycle of four-carbon compounds is employed. C4 photosynthesis repeatedly evolved from C3 photosynthesis, possibly driven by the survival advantages it bestows in the hot, often dry, and nutrient-poor soils of the tropics and subtropics. The development of the C4 metabolic cycle greatly increased the ATP demand in chloroplasts during the evolution of malic enzyme-type C4 photosynthesis, and the additional ATP required for C4 metabolism may be produced by the cyclic electron transport around PSI. Recent studies have revealed the nature of cyclic electron transport and the elevation of its components during C4 evolution. In this review, we discuss the energy requirements of C3 and C4 photosynthesis, the current model of cyclic electron transport around PSI and how cyclic electron transport is promoted during C4 evolution using studies on the genus Flaveria, which contains a number of closely related C3, C4 and C3-C4 intermediate species.
Collapse
Affiliation(s)
- Yuri Nakajima Munekage
- School of Science and Technology, Kwansei Gakuin University, 2-1 Gakuen, Sanda, Hyogo, 669-1337 Japan
| | - Yukimi Y Taniguchi
- School of Science and Technology, Kwansei Gakuin University, 2-1 Gakuen, Sanda, Hyogo, 669-1337 Japan
| |
Collapse
|
5
|
Khoshravesh R, Stinson CR, Stata M, Busch FA, Sage RF, Ludwig M, Sage TL. C3-C4 intermediacy in grasses: organelle enrichment and distribution, glycine decarboxylase expression, and the rise of C2 photosynthesis. JOURNAL OF EXPERIMENTAL BOTANY 2016; 67:3065-78. [PMID: 27073202 PMCID: PMC4867898 DOI: 10.1093/jxb/erw150] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Photorespiratory glycine shuttling and decarboxylation in bundle sheath (BS) cells exhibited by C2 species is proposed to be the evolutionary bridge to C4 photosynthesis in eudicots. To evaluate this in grasses, we compare anatomy, cellular localization of glycine decarboxylase (GDC), and photosynthetic physiology of a suspected C2 grass, Homolepis aturensis, with these traits in known C2 grasses, Neurachne minor and Steinchisma hians, and C3 S laxum that is sister to S hians We also use publicly available genome and RNA-sequencing data to examine the evolution of GDC subunits and enhance our understanding of the evolution of BS-specific GDC expression in C2 and C4 grasses. Our results confirm the identity of H aturensis as a C2 species; GDC is confined predominantly to the organelle-enriched BS cells in H aturensis and S hians and to mestome sheath cells of N minor Phylogenetic analyses and data obtained from immunodetection of the P-subunit of GDC are consistent with the hypothesis that the BS dominant levels of GDC in C2 and C4 species are due to changes in expression of a single GLDP gene in M and BS cells. All BS mitochondria and peroxisomes and most chloroplasts in H aturensis and S hians are situated centripetally in a pattern identical to C2 eudicots. In S laxum, which has C3-like gas exchange patterns, mitochondria and peroxisomes are positioned centripetally as they are in S hians This subcellular phenotype, also present in eudicots, is posited to initiate a facilitation cascade leading to C2 and C4 photosynthesis.
Collapse
Affiliation(s)
- Roxana Khoshravesh
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St., Ontario, ON M5S 3B2, Canada
| | - Corey R Stinson
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St., Ontario, ON M5S 3B2, Canada
| | - Matt Stata
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St., Ontario, ON M5S 3B2, Canada
| | - Florian A Busch
- Research School of Biology, Australian National University, Canberra, ACT 2601, Australia
| | - Rowan F Sage
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St., Ontario, ON M5S 3B2, Canada
| | - Martha Ludwig
- School of Chemistry and Biochemistry, University of Western Australia, Crawley, WA 6009, Australia
| | - Tammy L Sage
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St., Ontario, ON M5S 3B2, Canada
| |
Collapse
|
6
|
Wen Z, Zhang M. Salsola laricifolia, another C3-C 4 intermediate species in tribe Salsoleae s.l. (Chenopodiaceae). PHOTOSYNTHESIS RESEARCH 2015; 123:33-43. [PMID: 25227996 DOI: 10.1007/s11120-014-0037-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2013] [Accepted: 08/14/2014] [Indexed: 06/03/2023]
Abstract
This study identifies Salsola laricifolia as a C3-C4 intermediate in tribe Salsoleae s.l., Chenopodiaceae, and compares S. laricifolia with the previously described C3-C4 intermediates in Salsoleae. Photosynthetic pathway characteristics were studied in four species of this tribe including S. laricifolia, C3 Sympegma regelii, C3-C4 S. arbusculiformis, and C4 S. arbuscula, using the approaches of leaf anatomy and ultrastructure, activities of ribulose 1-5-bisphosphate carboxylase/oxygenase (Rubisco) and PEP carboxylase (PEPC), CO2 compensation point, and immunolocalization of Rubisco, PEPC, and the P-subunit of glycine decarboxylase (GDC). Salsola laricifolia has intermediate features, with near continuous and distinctive Kranz-like cells (KLCs) compared with the C3-Sympegmoid anatomical type and the C3-C4 intermediate S. arbusculiformis, a relatively low CO2 compensation point (30.4 μmol mol(-1)) and mesophyll (M)-to KLC tissue ratio, mitochondria in KLCs primarily occurring along the centripetal wall, and specific localization of P-protein GDC in the KLCs. The C3-type isotope value (-22.4 ‰), the absence of the clear labeling for PEPC in M cells, and the low activity of the PEPC enzyme (61.5 μmol mg(-1 )chlorophyll(-1) h(-1)) support the identification of S. laricifolia as a type I C3-C4 intermediate. Although these C3-C4 intermediate species have different structural features, one with discontinuous KL cells and the other with continuous, they have similar characteristics in physiology and biochemistry.
Collapse
Affiliation(s)
- Zhibin Wen
- Key Laboratory of Biogeography and Bioresource in Arid Land, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, No. 818 South Beijing Road, Ürūmqi, 830011, Xinjiang, People's Republic of China,
| | | |
Collapse
|
7
|
Saigo M, Tronconi MA, Gerrard Wheeler MC, Alvarez CE, Drincovich MF, Andreo CS. Biochemical approaches to C4 photosynthesis evolution studies: the case of malic enzymes decarboxylases. PHOTOSYNTHESIS RESEARCH 2013; 117:177-187. [PMID: 23832612 DOI: 10.1007/s11120-013-9879-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2013] [Accepted: 06/26/2013] [Indexed: 06/02/2023]
Abstract
C4 photosynthesis enables the capture of atmospheric CO2 and its concentration at the site of RuBisCO, thus counteracting the negative effects of low atmospheric levels of CO2 and high atmospheric levels of O2 (21 %) on photosynthesis. The evolution of this complex syndrome was a multistep process. It did not occur by simply recruiting pre-exiting components of the pathway from C3 ancestors which were already optimized for C4 function. Rather it involved modifications in the kinetics and regulatory properties of pre-existing isoforms of non-photosynthetic enzymes in C3 plants. Thus, biochemical studies aimed at elucidating the functional adaptations of these enzymes are central to the development of an integrative view of the C4 mechanism. In the present review, the most important biochemical approaches that we currently use to understand the evolution of the C4 isoforms of malic enzyme are summarized. It is expected that this information will help in the rational design of the best decarboxylation processes to provide CO2 for RuBisCO in engineering C3 species to perform C4 photosynthesis.
Collapse
Affiliation(s)
- Mariana Saigo
- Centro de Estudios Fotosintéticos y Bioquímicos (CEFOBI), Universidad Nacional de Rosario, Suipacha, 531, Rosario, Argentina
| | | | | | | | | | | |
Collapse
|
8
|
|
9
|
Sage RF, Sage TL, Kocacinar F. Photorespiration and the evolution of C4 photosynthesis. ANNUAL REVIEW OF PLANT BIOLOGY 2012; 63:19-47. [PMID: 22404472 DOI: 10.1146/annurev-arplant-042811-105511] [Citation(s) in RCA: 396] [Impact Index Per Article: 33.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
C(4) photosynthesis is one of the most convergent evolutionary phenomena in the biological world, with at least 66 independent origins. Evidence from these lineages consistently indicates that the C(4) pathway is the end result of a series of evolutionary modifications to recover photorespired CO(2) in environments where RuBisCO oxygenation is high. Phylogenetically informed research indicates that the repositioning of mitochondria in the bundle sheath is one of the earliest steps in C(4) evolution, as it may establish a single-celled mechanism to scavenge photorespired CO(2) produced in the bundle sheath cells. Elaboration of this mechanism leads to the two-celled photorespiratory concentration mechanism known as C(2) photosynthesis (commonly observed in C(3)-C(4) intermediate species) and then to C(4) photosynthesis following the upregulation of a C(4) metabolic cycle.
Collapse
Affiliation(s)
- Rowan F Sage
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, Canada.
| | | | | |
Collapse
|