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Roberts DW. Comparison of distance‐based and model‐based ordinations. Ecology 2019; 101:e02908. [DOI: 10.1002/ecy.2908] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/13/2019] [Revised: 08/04/2019] [Accepted: 08/26/2019] [Indexed: 01/09/2023]
Affiliation(s)
- David W. Roberts
- Department of Ecology Montana State University P.O. Box 173460 Bozeman Montana 59717‐3460 USA
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Thoen E, Aas AB, Vik U, Brysting AK, Skrede I, Carlsen T, Kauserud H. A single ectomycorrhizal plant root system includes a diverse and spatially structured fungal community. MYCORRHIZA 2019; 29:167-180. [PMID: 30929039 DOI: 10.1007/s00572-019-00889-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2018] [Accepted: 03/19/2019] [Indexed: 05/11/2023]
Abstract
Although only a relatively small proportion of plant species form ectomycorrhizae with fungi, it is crucial for growth and survival for a number of widespread woody plant species. Few studies have attempted to investigate the fine scale spatial structure of entire root systems of adult ectomycorrhizal (EcM) plants. Here, we use the herbaceous perennial Bistorta vivipara to map the entire root system of an adult EcM plant and investigate the spatial structure of its root-associated fungi. All EcM root tips were sampled, mapped and identified using a direct PCR approach and Sanger sequencing of the internal transcribed spacer region. A total of 32.1% of all sampled root tips (739 of 2302) were successfully sequenced and clustered into 41 operational taxonomic units (OTUs). We observed a clear spatial structuring of the root-associated fungi within the root system. Clusters of individual OTUs were observed in the younger parts of the root system, consistent with observations of priority effects in previous studies, but were absent from the older parts of the root system. This may suggest a succession and fragmentation of the root-associated fungi even at a very fine scale, where competition likely comes into play at different successional stages within the root system.
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Affiliation(s)
- Ella Thoen
- Section for Genetics and Evolutionary Biology (EVOGENE), Department of Biosciences, University of Oslo, PO box 1066, Blindern, 0316, Oslo, Norway.
| | - Anders B Aas
- Section for Genetics and Evolutionary Biology (EVOGENE), Department of Biosciences, University of Oslo, PO box 1066, Blindern, 0316, Oslo, Norway
- Bymiljøetaten Oslo Kommune, PO box 636, Løren, 0507, Oslo, Norway
| | - Unni Vik
- Section for Genetics and Evolutionary Biology (EVOGENE), Department of Biosciences, University of Oslo, PO box 1066, Blindern, 0316, Oslo, Norway
| | - Anne K Brysting
- Section for Genetics and Evolutionary Biology (EVOGENE), Department of Biosciences, University of Oslo, PO box 1066, Blindern, 0316, Oslo, Norway
| | - Inger Skrede
- Section for Genetics and Evolutionary Biology (EVOGENE), Department of Biosciences, University of Oslo, PO box 1066, Blindern, 0316, Oslo, Norway
| | - Tor Carlsen
- The Natural History museum, University of Oslo, PO box 1172, Blindern, 0318, Oslo, Norway
| | - Håvard Kauserud
- Section for Genetics and Evolutionary Biology (EVOGENE), Department of Biosciences, University of Oslo, PO box 1066, Blindern, 0316, Oslo, Norway
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Abstract
Multivariate analysis can be defined as an analysis in which many variables are examined simultaneously. These types of analyses are invaluable in many scientific fields in which patterns and trends in complex systems must be studied. Multivariate analysis is used in community ecology and paleoecology to summarize patterns of variation between and within different communities so as to allow the ecologist to describe the major patterns and interpret the cause of variation. Some examples of plant paleoecological studies which have used multivariate techniques are Oltz (1969, 1971), Clapham (1971), Robichaux and Taylor (1977), Pheifer (1979), Spicer and Hill (1979), Frederickson (1981), Phillips and DiMichele (1981), Boulter and Hubbard (1982), LaPasha and Miller (1984), Farley and Dilcher (1986), and Kovach (1985, 1987).
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Khan SM, Page SE, Ahmad H, Harper DM. Sustainable utilization and conservation of plant biodiversity in montane ecosystems: the western Himalayas as a case study. ANNALS OF BOTANY 2013; 112:479-501. [PMID: 23825353 PMCID: PMC3718215 DOI: 10.1093/aob/mct125] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
BACKGROUND Conservation of the unique biodiversity of mountain ecosystems needs trans-disciplinary approaches to succeed in a crowded colloquial world. Geographers, conservationists, ecologists and social scientists have, in the past, had the same conservation goals but have tended to work independently. In this review, the need to integrate different conservation criteria and methodologies is discussed. New criteria are offered for prioritizing species and habitats for conservation in montane ecosystems that combine both ecological and social data. SCOPE Ecological attributes of plant species, analysed through robust community statistical packages, provide unbiased classifications of species assemblages and environmental biodiversity gradients and yield importance value indices (IVIs). Surveys of local communities' utilization of the vegetation provides use values (UVs). This review suggests a new means of assessing anthropogenic pressure on plant biodiversity at both species and community levels by integrating IVI and UV data sets in a combined analysis. CONCLUSIONS Mountain ecosystems are hot spots for plant conservation efforts because they hold a high overall plant diversity as communities replace each other along altitudinal and climatic gradients, including a high proportion of endemic species. This review contributes an enhanced understanding of (1) plant diversity in mountain ecosystems with special reference to the western Himalayas; (2) ethnobotanical and ecosystem service values of mountain vegetation within the context of anthropogenic impacts; and (3) local and regional plant conservation strategies and priorities.
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Affiliation(s)
- Shujaul Mulk Khan
- Centre for Landscape and Climate Research, University of Leicester, UK
- Department of Botany, Hazara University, Mansehra, Pakistan
- Department of Biology, University of Leicester, UK
- For correspondence. E-mail or
| | - Sue E. Page
- Department of Geography, University of Leicester, UK
| | - Habib Ahmad
- Department of Genetics, Hazara University Mansehra, Pakistan
| | - David M. Harper
- Centre for Landscape and Climate Research, University of Leicester, UK
- Department of Biology, University of Leicester, UK
- For correspondence. E-mail or
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Legg CJ, Nagy L. Why most conservation monitoring is, but need not be, a waste of time. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2006; 78:194-9. [PMID: 16112339 DOI: 10.1016/j.jenvman.2005.04.016] [Citation(s) in RCA: 115] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2004] [Revised: 03/16/2005] [Accepted: 04/12/2005] [Indexed: 05/04/2023]
Abstract
Ecological conservation monitoring programmes abound at various organisational and spatial levels from species to ecosystem. Many of them suffer, however, from the lack of details of goal and hypothesis formulation, survey design, data quality and statistical power at the start. As a result, most programmes are likely to fail to reach the necessary standard of being capable of rejecting a false null hypothesis with reasonable power. Results from inadequate monitoring are misleading for their information quality and are dangerous because they create the illusion that something useful has been done. We propose that conservation agencies and those funding monitoring work should require the demonstration of adequate power at the outset of any new monitoring scheme.
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Affiliation(s)
- Colin J Legg
- School of GeoSciences, University of Edinburgh, Crew Building, King's Buildings, Mayfield Road, Edinburgh EH9 3JN, Scotland
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7
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Trends and problems in the application of classification and ordination methods in plant ecology. ACTA ACUST UNITED AC 1988. [DOI: 10.1007/bf00033421] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Kohlmann B, Nix H, Shaw DD. Environmental predictions and distributional limits of chromosomal taxa in the Australian grasshopperCaledia captiva (F.). Oecologia 1988; 75:483-493. [DOI: 10.1007/bf00776409] [Citation(s) in RCA: 33] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/1987] [Indexed: 11/30/2022]
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Minchin PR. An evaluation of the relative robustness of techniques for ecological ordination. ACTA ACUST UNITED AC 1987. [DOI: 10.1007/bf00038690] [Citation(s) in RCA: 799] [Impact Index Per Article: 21.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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12
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Bowman DMJS. Stand characteristics, understorey associates and environmental correlates ofEucalyptus tetrodonta F. Muell. forests on Gunn Point, northern Australia. ACTA ACUST UNITED AC 1986. [DOI: 10.1007/bf00044881] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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13
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BROWN MJ, RATKOWSKY DA, MINCHIN PR. A comparison of detrended correspondence analysis and principal co-ordinates analysis using four sets of Tasmanian vegetation data. AUSTRAL ECOL 1984. [DOI: 10.1111/j.1442-9993.1984.tb01363.x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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14
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On the integrated interpretation of indirect site ordinations: a case study using semi-arid vegetation in southeastern Spain. ACTA ACUST UNITED AC 1984. [DOI: 10.1007/bf00039980] [Citation(s) in RCA: 73] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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Oksanen J. Ordination of boreal heath-like vegetation with principal component analysis, correspondence analysis and multidimensional scaling. ACTA ACUST UNITED AC 1983. [DOI: 10.1007/bf00044995] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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