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Konovalov AA, Karpova EV, Shundrina IK, Razmakhnin EP, Eltsov IV, Goncharov NP. Effect of Allelic Variants of Aromatic Alcohol Dehydrogenase CADim on Micromorphological and Chemical Tissue Indices in the Spring Bread Wheat Triticum aestivum L. APPL BIOCHEM MICRO+ 2021. [DOI: 10.1134/s0003683821040086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Singh N, Wu S, Tiwari V, Sehgal S, Raupp J, Wilson D, Abbasov M, Gill B, Poland J. Genomic Analysis Confirms Population Structure and Identifies Inter-Lineage Hybrids in Aegilops tauschii. FRONTIERS IN PLANT SCIENCE 2019; 10:9. [PMID: 30740115 PMCID: PMC6357674 DOI: 10.3389/fpls.2019.00009] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2018] [Accepted: 01/07/2019] [Indexed: 05/21/2023]
Abstract
Aegilops tauschii, the D-genome donor of bread wheat, Triticum aestivum, is a storehouse of genetic diversity, and an important resource for future wheat improvement. Genomic and population analysis of 549 Ae. tauschii and 103 wheat accessions was performed by using 13,135 high quality SNPs. Population structure, principal component, and cluster analysis confirmed the differentiation of Ae. tauschii into two lineages; lineage 1 (L1) and lineage 2 (L2), the latter being the wheat D-genome donor. Lineage L1 contributes only 2.7% of the total introgression from Ae. tauschii for a set of United States winter wheat lines, confirming the great amount of untapped genetic diversity in L1. Lineage L2 accessions had overall greater allelic diversity and wheat accessions had the least allelic diversity. Both lineages also showed intra-lineage differentiation with L1 being driven by longitudinal gradient and L2 differentiated by altitude. There has previously been little reported on natural hybridization between L1 and L2. We found nine putative inter-lineage hybrids in the population structure analysis, each containing numerous lineage-specific private alleles from both lineages. One hybrid was confirmed as a recombinant inbred between the two lineages, likely artificially post collection. Of the remaining eight putative hybrids, a group of seven from Georgia carry 713 SNPs with private alleles, which points to the possibility of a novel L1-L2 hybrid lineage. To facilitate the use of Ae. tauschii in wheat improvement, a MiniCore consisting of 29 L1 and 11 L2 accessions, has been developed based on genotypic, phenotypic and geographical data. MiniCore reduces the collection size by over 10-fold and captures 84% of the total allelic diversity in the whole collection.
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Affiliation(s)
- Narinder Singh
- Department of Plant Pathology, Wheat Genetics Resource Center, Kansas State University, Manhattan, KS, United States
| | - Shuangye Wu
- Department of Plant Pathology, Wheat Genetics Resource Center, Kansas State University, Manhattan, KS, United States
| | - Vijay Tiwari
- Department of Plant Science & Landscape Architecture, University of Maryland, College Park, MD, United States
| | - Sunish Sehgal
- Department of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD, United States
| | - John Raupp
- Department of Plant Pathology, Wheat Genetics Resource Center, Kansas State University, Manhattan, KS, United States
| | - Duane Wilson
- Department of Plant Pathology, Wheat Genetics Resource Center, Kansas State University, Manhattan, KS, United States
| | - Mehraj Abbasov
- Genetic Resources Institute, Azerbaijan National Academy of Sciences, Baku, Azerbaijan
| | - Bikram Gill
- Department of Plant Pathology, Wheat Genetics Resource Center, Kansas State University, Manhattan, KS, United States
| | - Jesse Poland
- Department of Plant Pathology, Wheat Genetics Resource Center, Kansas State University, Manhattan, KS, United States
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Divergence of VRN-B3 alleles during the evolution of domesticated wheat. Mol Genet Genomics 2018; 294:263-275. [PMID: 30374563 DOI: 10.1007/s00438-018-1506-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2018] [Accepted: 10/21/2018] [Indexed: 10/28/2022]
Abstract
Genetic changes accrued during the domestication of wheat have been crucial in improving the cultivation and yield of this strategic crop. Allelic variation at the VRN3 gene makes a significant contribution to the adaptability of wheat to a wide range of environmental conditions. In the present study, the origin and distribution of the Vrn-B3a and Vrn-B3b alleles during the evolution of wheat were investigated. Analysis of 214 accessions of 11 polyploid wheat species from different eco-geographical areas found the Vrn-B3a and Vrn-B3b alleles in accessions of tetraploid wheat T. dicoccum from Russia and hexaploid wheat of T. spelta from Iran, respectively. DNA sequence analysis of an insertion in the Vrn-B3b promoter region identified a new family of non-autonomous transposable hAT elements that originated in T. urartu lineage. Publicly available whole genome sequence assemblies of 11 T. aestivum and T. durum varieties, as well as WGS of T. dicoccoides were used to investigate the phylogeny and distribution of the TEs inserted in the Vrn-B3a and Vrn-B3b promoter regions, to determine the origin of these alleles. Results showed that both Vrn-B3a and Vrn-B3b diverged during the domestication of wheat, in the T. dicoccum lineage. However, while Vrn-B3a is common in T. dicoccum and T. durum from Ukraine and Russia the Vrn-B3b allele likely has a more recent origin in hexaploid wheat from the Near East.
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Dubois B, Bertin P, Mingeot D. Molecular diversity of α-gliadin expressed genes in genetically contrasted spelt ( Triticum aestivum ssp. spelta) accessions and comparison with bread wheat ( T. aestivum ssp. aestivum) and related diploid Triticum and Aegilops species. MOLECULAR BREEDING : NEW STRATEGIES IN PLANT IMPROVEMENT 2016; 36:152. [PMID: 27942245 PMCID: PMC5104789 DOI: 10.1007/s11032-016-0569-5] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2016] [Accepted: 10/11/2016] [Indexed: 05/31/2023]
Abstract
The gluten proteins of cereals such as bread wheat (Triticum aestivum ssp. aestivum) and spelt (T. aestivum ssp. spelta) are responsible for celiac disease (CD). The α-gliadins constitute the most immunogenic class of gluten proteins as they include four main T-cell stimulatory epitopes that affect CD patients. Spelt has been less studied than bread wheat and could constitute a source of valuable diversity. The objective of this work was to study the genetic diversity of spelt α-gliadin transcripts and to compare it with those of bread wheat. Genotyping data from 85 spelt accessions obtained with 19 simple sequence repeat (SSR) markers were used to select 11 contrasted accessions, from which 446 full open reading frame α-gliadin genes were cloned and sequenced, which revealed a high allelic diversity. High variations among the accessions were highlighted, in terms of the proportion of α-gliadin sequences from each of the three genomes (A, B and D), and their composition in the four T-cell stimulatory epitopes. An accession from Tajikistan stood out, having a particularly high proportion of α-gliadins from the B genome and a low immunogenic content. Even if no clear separation between spelt and bread wheat sequences was shown, spelt α-gliadins displayed specific features concerning e.g. the frequencies of some amino acid substitutions. Given this observation and the variations in toxicity revealed in the spelt accessions in this study, the high genetic diversity held in spelt germplasm collections could be a valuable resource in the development of safer varieties for CD patients.
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Affiliation(s)
- Benjamin Dubois
- Centre wallon de Recherches agronomiques (CRA-W), Département Sciences du vivant, Chaussée de Charleroi, 234, 5030 Gembloux, Belgium
- Earth and Life Institute – Agronomy, Université catholique de Louvain (UCL), Croix du Sud, 2 bte L7.05.11, 1348 Louvain-la-Neuve, Belgium
| | - Pierre Bertin
- Earth and Life Institute – Agronomy, Université catholique de Louvain (UCL), Croix du Sud, 2 bte L7.05.11, 1348 Louvain-la-Neuve, Belgium
| | - Dominique Mingeot
- Centre wallon de Recherches agronomiques (CRA-W), Département Sciences du vivant, Chaussée de Charleroi, 234, 5030 Gembloux, Belgium
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Konovalov AA, Shundrina IK, Karpova EV, Goncharov NP, Kondratenko EY. Chromosomal localization of aromatic alcohol dehydrogenase fast-migrating isoenzyme Aadh1F (CAD1-F) gene in Triticum aestivum L. bread wheat. RUSS J GENET+ 2016. [DOI: 10.1134/s1022795416080056] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Affiliation(s)
- R. A. McIntosh
- University of Sydney; Plant Breeding Institute; Castle Hill, N.S.W. Australia
| | - Jane E. Cusick
- University of Sydney; Plant Breeding Institute; Castle Hill, N.S.W. Australia
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Konovalov AA, Shundrina IK, Karpova EV, Nefedov AA, Goncharov NP. Inheritance and phenotype expression of functional and null alleles of aromatic alcohol dehydrogenase (CAD) in diploid wheats. RUSS J GENET+ 2014. [DOI: 10.1134/s1022795414110052] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Dvorak J, Deal KR, Luo MC, You FM, von Borstel K, Dehghani H. The origin of spelt and free-threshing hexaploid wheat. J Hered 2012; 103:426-41. [PMID: 22378960 DOI: 10.1093/jhered/esr152] [Citation(s) in RCA: 99] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
It is widely believed that hexaploid wheat originated via hybridization of hulled tetraploid emmer with Aegilops tauschii (genomes DD) and that the nascent hexaploid was spelt, from which free-threshing wheat evolved by mutations. To reassess the role of spelt in the evolution of Triticum aestivum, 4 disomic substitution lines of Ae. tauschii chromosome 2D in Chinese Spring wheat were developed and one of them was used to map the Tg locus, which controls glume tenacity in Ae. tauschii, relative to simple sequence repeat (SSR) and expressed sequence tag loci on wheat chromosome 2D. The segregation of SSR markers was used to assess the presence of Tg alleles in 11 accessions of spelt, both from Europe and from Asia. Ten of them had an inactive tg allele in the D genome and most had an active Tg allele in the B genome. This is consistent with spelt being derived from free-threshing hexaploid wheat by hybridization of free-threshing wheat with hulled emmer. It is proposed that the tetraploid parent of hexaploid wheat was not hulled emmer but a free-threshing form of tetraploid wheat.
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Affiliation(s)
- Jan Dvorak
- Department of Plant Sciences, University of California, Davis, CA 95616, USA.
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Chromosomal locations of elevenElytrigia elongata(=Agropyron elongatum) isozyme structural genes. Genet Res (Camb) 2009. [DOI: 10.1017/s0016672300021212] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
SUMMARYThe zymogram phenotypes of 11 enzymes were determined for 22Triticum aestivumcv. Chinese Spring-Elytrigia elongatadisomic and ditelosomic chromosome addition lines. Eleven isozyme structural genes were located in specific arms of sixE. elongatachromosomes, as follows:Gpi-E1in 1ES,Est-E1in 3ES,Got-E3in 3EL,Adh-E1andLpx-E1in 4ES,Adh-E2andLpx-E2in 5EL,Amp-E1in 6Eα,Adh-E3andGot-E2in 6Eβ, andEp-E1in 7EL. TheE. elongatachromosomes present in five disomic addition lines have previously been designated 1E, 2E, 4E, 6E, and 7E to indicate their homoeology with Chinese Spring chromosomes. The results of this study support these designations. The development of disomic putative 3E and 5E addition lines is reported. The added chromosomes designated IV, V, and VI that are present in three of the seven original disomicT. aestivum-E. elongataaddition lines are translocated. Evidence that VL and VIL are opposite arms of 2E and that IV is partially homoeologous to 3E has been published. The results reported in this paper indicate that IVS = 3ES, IVL = 7EL, VS = 3ES, and VIS = 5ES and are consistent with VL and VIL being opposite arms of 2E. The synteny relationships of the 11E. elongataisozyme genes identified in this study are fully consistent with those of homoeologousT. aestivumcv. Chinese Spring genes and thus provide evidence that the gene synteny groups which these two species inherited from their common ancestor are conserved. This study further documents the valuable role that studies of isozyme genes can play in the isolation, characterization, and maintenance of alien chromosomes, telosomes, and chromosomal segments in wheat strains.
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NIEMEYER HERMANNM, COPAJA SYLVIAV, BARRIA BERNARDITAN. The Triticeae as sources of hydroxamic acids, secondary metabolites in wheat conferring resistance against aphids. Hereditas 2008. [DOI: 10.1111/j.1601-5223.1992.tb00158.x] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
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12
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NIEMEYER HERMANNM, COPAJA SYLVIAV, BARRIA BERNARDITAN. The Triticeae as sources of hydroxamic acids, secondary metabolites in wheat conferring resistance against aphids. Hereditas 2008. [DOI: 10.1111/j.1601-5223.1992.tb00840.x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
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Goncharov NP, Kondratenko EJ, Bannikova SV, Konovalov AA, Golovnina KA. Comparative genetic analysis of diploid naked wheat Triticum sinskajae and the progenitor T. monococcum accession. RUSS J GENET+ 2007. [DOI: 10.1134/s1022795407110075] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Caldwell KS, Dvorak J, Lagudah ES, Akhunov E, Luo MC, Wolters P, Powell W. Sequence polymorphism in polyploid wheat and their d-genome diploid ancestor. Genetics 2005; 167:941-7. [PMID: 15238542 PMCID: PMC1470897 DOI: 10.1534/genetics.103.016303] [Citation(s) in RCA: 121] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Sequencing was used to investigate the origin of the D genome of the allopolyploid species Triticum aestivum and Aegilops cylindrica. A 247-bp region of the wheat D-genome Xwye838 locus, encoding ADP-glucopyrophosphorylase, and a 326-bp region of the wheat D-genome Gss locus, encoding granule-bound starch synthase, were sequenced in a total 564 lines of hexaploid wheat (T. aestivum, genome AABBDD) involving all its subspecies and 203 lines of Aegilops tauschii, the diploid source of the wheat D genome. In Ae. tauschii, two SNP variants were detected at the Xwye838 locus and 11 haplotypes at the Gss locus. Two haplotypes with contrasting frequencies were found at each locus in wheat. Both wheat Xwye838 variants, but only one of the Gss haplotypes seen in wheat, were found among the Ae. tauschii lines. The other wheat Gss haplotype was not found in either Ae. tauschii or 70 lines of tetraploid Ae. cylindrica (genomes CCDD), which is known to hybridize with wheat. It is concluded that both T. aestivum and Ae. cylindrica originated recurrently, with at least two genetically distinct progenitors contributing to the formation of the D genome in both species.
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Blatter RHE, Jacomet S, Schlumbaum A. About the origin of European spelt ( Triticum spelta L.): allelic differentiation of the HMW Glutenin B1-1 and A1-2 subunit genes. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2004; 108:360-7. [PMID: 14564390 DOI: 10.1007/s00122-003-1441-7] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2003] [Accepted: 08/13/2003] [Indexed: 05/21/2023]
Abstract
To investigate the origin of European spelt ( Triticum spelta L., genome AABBDD) and its relation to bread wheat ( Triticum aestivum L., AABBDD), we analysed an approximately 1-kb sequence, including a part of the promoter and the coding region, of the high-molecular-weight (HMW) glutenin B1-1 and A1-2 subunit genes in 58 accessions of hexa- and tetraploid wheat from different geographical regions. Six Glu-B1-1 and five Glu-A1-2 alleles were identified based on 21 and 19 informative sites, respectively, which suggests a polyphyletic origin of the A- and B-genomes of hexaploid wheat. In both genes, a group of alleles clustered in a distinct, so-called beta subclade. High frequencies of alleles from the Glu-B1-1 and Glu-A1-2 beta subclades differentiated European spelt from Asian spelt and bread wheat. This indicates different origins of European and Asian spelt, and that European spelt does not derive from the hulled progenitors of bread wheat. The conjoint differentiation of alleles of the A- and B-genome in European spelt suggests the introgression of a tetraploid wheat into free-threshing hexaploid wheat as the origin of European spelt.
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Affiliation(s)
- R H E Blatter
- Institut für Prähistorische und Naturwissenschaftliche Archäologie, Universität Basel, Spalenring 145, 4055, Basel, Switzerland.
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Salamini F, Ozkan H, Brandolini A, Schäfer-Pregl R, Martin W. Genetics and geography of wild cereal domestication in the near east. Nat Rev Genet 2002; 3:429-41. [PMID: 12042770 DOI: 10.1038/nrg817] [Citation(s) in RCA: 332] [Impact Index Per Article: 15.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
About 12,000 years ago, humans began the transition from hunter-gathering to a sedentary, agriculture-based society. From its origins in the Near East, farming expanded throughout Europe, Asia and Africa, together with various domesticated plants and animals. Where, how and why agriculture originated is still debated. But newer findings, on the basis of genome-wide measures of genetic similarity, have traced the origins of some domesticated cereals to wild populations of naturally occurring grasses that persist in the Near East. A better understanding of the genetic differences between wild grasses and domesticated crops adds important facets to the continuing debate on the origin of Western agriculture and the societies to which it gave rise.
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Affiliation(s)
- Francesco Salamini
- Max-Planck-Institut für Züchtungsforschung, Carl-von-Linné-Weg 10, 50829 Köln, Germany.
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Bálint AF, Kovács G, Sutka J. ORIGIN AND TAXONOMY OF WHEAT IN THE LIGHT OF RECENT RESEARCH. ACTA ACUST UNITED AC 2000. [DOI: 10.1556/aagr.48.2000.3.11] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
There is still disagreement among scientists on the exact origin of common wheat (Triticum aestivum ssp. aestivum), one of the most important crops in the world. The first step in the development of the hexaploid aestivum group (ABD) may have been hybridisation between T. urartu (A), as pollinator, and a species related to the Sitopsis section of the Aegilops genus (S) as cytoplasm donor, leading to the creation of the tetraploid species T. turgidum ssp. dicoccoides (AB). The following step may have involved hybridisation between T. turgidum ssp. dicoccon (AB genome, cytoplasm donor), a descendant of T. turgidum ssp. dicoccoides, and Ae. tauschii (D genome, pollinator), resulting in the hexaploid species T. aestivum ssp. spelta (ABD) or some other hulled type. This form may have given rise to naked types, including T. aestivum ssp. aestivum (ABD). The ancestors of the tetraploid T. timopheevii (AG) may have been the diploid T. urartu (A genome, pollinator) and Ae. speltoides (S genome, cytoplasm donor). Species in the timopheevii group developed later than those in the turgidum group, as confirmed by the fact that the G genome is practically identical to the S genome of Ae. speltoides, while the more ancient B genome has undergone divergent evolution. Hybridisation between T. timopheevii (AG, cytoplasm donor) and T. monococcum (A m, pollinator) may have resulted in the species T. zhukovskyi (AGA m). Research into the relationships between the various species is of assistance in compiling the taxonomy of wheat and in avoiding misunderstandings arising from the fact that some species are known by two or more synonymous names.
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Affiliation(s)
- A. F. Bálint
- 1 Agricultural Research Institute of the Hungarian Academy of Sciences Martonvásár, Hungary
| | - G. Kovács
- 2 Agricultural Research Institute of the Hungarian Academy of Sciences Martonvásár, Hungary
| | - J. Sutka
- 3 Agricultural Research Institute of the Hungarian Academy of Sciences Martonvásár, Hungary
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Ciaffi M, Dominici L, Lafiandra D. Gliadin polymorphism in wild and cultivated einkorn wheats. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 1997; 94:68-74. [PMID: 19352747 DOI: 10.1007/s001220050383] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/1996] [Accepted: 07/12/1996] [Indexed: 05/27/2023]
Abstract
To study the relationships between different species of the Einkorn group, 408 accessions of Triticum monococcum, T. boeoticum, T. boeoticum ssp. thauodar and T. urartu were analyzed electrophoretically for their protein composition at the Gli-1 and Gli-2 loci. In all the species the range of allelic variation at the loci examined is remarkable. The gliadin patterns of T. monococcum and T. boeoticum were very similar to one another but differed substantially from those of T. urartu. Several accessions of T. boeoticum and T. monococcum were shown to share the same alleles at the Gli-1 and Gli-2 loci, confirming the recent nomenclature that considers these wheats as different subspecies of the same species, T. monococcum. The gliadin composition of T. urartu resembled that of the A genome of polyploid wheats more than did T. boeoticum or T. monococcum, supporting the hypothesis that T. urartu, rather than T. boeoticum, is the donor of the A genome in cultivated wheats. Because of their high degree of polymorphism the gliadin markers may help in selecting breeding parents from diploid wheat germ plasm collections and can be used both to search for valuable genes linked to the gliadin-coding loci and to monitor the transfer of alien genes into cultivated polyploid wheats.
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Affiliation(s)
- M Ciaffi
- Dipartimento di Agrobiologia ed Agrochimica, Universitá della Tuscia, 01100, Viterbo, Italy
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Jiang J, Gill BS. Different species-specific chromosome translocations in Triticum timopheevii and T. turgidum support the diphyletic origin of polyploid wheats. Chromosome Res 1994; 2:59-64. [PMID: 8162322 DOI: 10.1007/bf01539455] [Citation(s) in RCA: 129] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Triticum timopheevii ssp. timopheevii and T. timopheevii ssp. araraticum were analysed by sequential N-banding and genomic in situ hybridization. Three chromosomes, 6At, 1G and 4G, were involved in At-G intergenomic translocations in all six lines analysed. These chromosomes may be derived from a cyclic translocation that is species-specific to T. timopheevii. In contrast, Triticum turgidum has a species-specific cyclic translocation involving chromosomes 4A, 5A and 7B. The discovery of different species-specific chromosome translocations supports the diphyletic hypothesis of the evolution of tetraploid wheats. The results from genomic blocking analysis also revealed that the chromosomes of Aegilops speltoides are closer to the G genome than the B genome chromosomes. The possible role of species-specific translocations in the evolution of wheat is discussed.
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Affiliation(s)
- J Jiang
- Wheat Genetics Resource Center, Kansas State University, Manhattan 66506
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21
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Use of Isozymes to Characterize Triticum aestivum — Aegilops markgrafii Addition Lines. ACTA ACUST UNITED AC 1993. [DOI: 10.1016/s0015-3796(11)80141-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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NISHIKAWA K, FURUTA Y, YAMADA T, KUDO S. Genetic studies of α-amylase isozymes in wheat VII. Variation in diploid ancestral species and phylogeny of tetraploid wheat. Genes Genet Syst 1992. [DOI: 10.1266/ggs.67.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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23
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NISHIKAWA K, FURUTA Y, YAMADA T, KUDO S. Genetic studies of .ALPHA.-amylase isozymes in wheat VII. Variation in diploid ancestral species and phylogeny of tetraploid wheat. ACTA ACUST UNITED AC 1992. [DOI: 10.1266/jjg.67.1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Breiman A, Bogher M, Sternberg H, Graur D. Variability and uniformity of mitochondrial DNA in populations of putative diploid ancestors of common wheat. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 1991; 82:201-208. [PMID: 24213067 DOI: 10.1007/bf00226214] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/1990] [Accepted: 12/05/1990] [Indexed: 06/02/2023]
Abstract
By using restriction endonuclease digestion patterns, the degree of intraspecific polymorphism of mitochondrial DNA in four diploid species of wheat and Aegilops, Ae. speltoides, Ae. longissima, Ae. squarrosa, and Triticum monococcum, was assessed. The outbreeding Ae. speltoides was found to possess the highest degree of variability, the mean number of nucleotide substitutions among conspecific individuals being 0.027 substitutions per nucleotide site. A very low degree of mtDNA variation was detected among Ae. longissima accessions, with most of the enzyme-probe combinations exhibiting uniform hybridization patterns. The mean number of substitutions among Ae. longissima individuals was 0.001 substitutions per nucleotide site. The domesticated diploid wheat T. monococcum var. monococcum and its conspecific variant T. monococcum var. boeoticum seem to lack mitochondrial DNA variability altogether. Thus, the restriction fragment pattern can be used as a characteristic identifier of the T. monococcum cytoplasmic genome. Similarly, Ae. squarrosa accessions were found to be genetically uniform. A higher degree of variation among accessions is observed when noncoding sequences are used as probes then when adjacent coding regions are used. Thus, while noncoding regions may contain regulatory functions, they are subject to less stringent functional constraints than protein-coding regions. Intraspecific variation in mitochondrial DNA correlates perfectly with the nuclear variability detected by using protein electrophoretic characters. This correlation indicates that both types of variation are selectively neutral and are affected only by the effective population size.
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Affiliation(s)
- A Breiman
- Department of Botany, George S. Wise Faculty of Life Science, Tel Aviv University, 69978, Ramat Aviv, Israel
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Metakovsky EV, Kudryavtsev AM, Iakobashvili ZA, Novoselskaya AY. Analysis of phylogenetic relations of durum, carthlicum and common wheats by means of comparison of alleles of gliadin-coding loci. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 1989; 77:881-887. [PMID: 24232907 DOI: 10.1007/bf00268342] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/1988] [Accepted: 12/27/1988] [Indexed: 06/02/2023]
Abstract
Polymorphism and inheritance of wheat storage protein, gliadin, of durum (macaroni) and carthlicum wheats have been studied. Analysis of gliadin in 78 cultivars and in F2 seeds of intercultivar crosses of durum wheat revealed three different chromosome 1A-encoded blocks of components similar to those found in common wheat (GLD1A2, GLD1A18, GLD1A19). Most of the durum cultivars studied had these three blocks; GLD1A2 was also frequent in common wheat. In contrast, all chromosome 1B-encoded blocks of durum clearly differed in component composition from those found in common wheat. Therefore, durum could not be an ancestor or a derivate of recent bread wheat. Analysis of gliadin in the collection of carthlicum wheat (14 accessions) revealed several suspected chromosome 1A, 1B, and 6A-controlled blocks, some of which were similar to those in common wheat, while others were different. Therefore, carthlicum is likely to be an ancestor or a derivate of some forms of bread wheat. There were also chromosome 1A and 6A-, but not 1B-encoded blocks which were identical in durum and carthlicum wheats. The results confirm that all three wheats share the same genome A, but emphasize the heterogeneity of genotypes among donors of this genome. Discovery of identical blocks in tetraploids and hexaploids indicates polyphyletic [from different genotypes of donor (s)] origin of these wheats.
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Affiliation(s)
- E V Metakovsky
- N.I. Vavilov Institute of General Genetics, B-333, Moscow, USSR
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26
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Restriction endonuclease profiles of mitochondrial DNA and the origin of the B genome of bread wheat, Triticum aestivum. Heredity (Edinb) 1989. [DOI: 10.1038/hdy.1989.48] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
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Kudryavtsev AM, Metakovsky EV, Sozinov AA. Polymorphism and inheritance of gliadin components controlled by chromosome 6A of spring durum wheat. Biochem Genet 1988; 26:693-703. [PMID: 3242490 DOI: 10.1007/bf02395516] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
The gliadin composition of 78 spring durum wheat varieties has been studied by one-dimensional (Al-lactate, pH 3.1) and two-dimensional (first dimension, Al-lactate, pH 3.1; second dimension, sodium dodecyl sulfate-polyacrylamide gel) electrophoresis. Analysis of hybrids has shown that all components of the alpha zone of gliadin spectra are inherited together as blocks and are, probably, coded for by a cluster of tightly linked genes located on chromosome 6A. Fourteen variants of gliadin blocks have been identified, which can be classified into five families on the basis of component composition. All families but one have analogues among chromosome 6A-controlled blocks of bread wheat. The results indicate that some of the genome A diploid genotypes that were ancestors of durum wheats were also ancestors of bread wheats and that polyploid wheats were produced by repeated allopolyploidization events, as has been suggested earlier.
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Affiliation(s)
- A M Kudryavtsev
- N.I. Vavilov Institute of General Genetics, USSR Academy of Sciences, Moscow
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28
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Hart GE. Genetic control of NADH dehydrogenase-1 and aromatic alcohol dehydrogenase-2 in hexaploid wheat. Biochem Genet 1987; 25:837-46. [PMID: 3329906 DOI: 10.1007/bf00502603] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
The genetic control of NADH dehydrogenase-1 (NDH-1) and aromatic alcohol dehydrogenase-2 (AADH-2) was investigated in Triticum aestivum cv. Chinese Spring. Evidence was obtained that NDH-1 is active as a monomer and is encoded by genes located in the p arms of the homoeologous group 4 chromosomes. The NDH-1 gene loci located in 4Ap, 4Bp, and 4Dp were designated Ndh-A1, Ndh-B1, and Ndh-D1, respectively. Aadh-A2 was previously reported to be located in 6Aq; in this study, Aadh-B2 and Aadh-D2 were localized in 6Bq and 6Dq, respectively. Alcohol dehydrogenase-1 is expressed on AADH-2 zymograms; the presence of a contaminating aliphatic alcohol in one or more reagents is suggested as the probable cause of this phenomenon.
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Affiliation(s)
- G E Hart
- Soil and Crop Sciences Department, Texas A&M University, College Station 77843
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Isoenzyme Variation in the Barley Genus Hordeum L. I. Alcohol Dehydrogenase and Superoxide Dismutase. ACTA ACUST UNITED AC 1986. [DOI: 10.1016/s0015-3796(86)80003-8] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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31
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Jaaska V. NAD-dependent aromatic alcohol dehydrogenase in wheats (Triticum L.) and goatgrasses (Aegilops L.): evolutionary genetics. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 1984; 67:535-40. [PMID: 24258843 DOI: 10.1007/bf00264900] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/1983] [Indexed: 05/21/2023]
Abstract
Evolutionary electrophoretic variation of a NAD-specific aromatic alcohol dehydrogenase, AADH-E, in wheat and goatgrass species is described and discussed in comparison with a NAD-specific alcohol dehydrogenase (ADH-A) and a NADP-dependent AADH-B studied previously. Cultivated tetraploid emmer wheats (T. turgidum s. l.) and hexaploid bread wheats (T. aestivum s. l.) are all fixed for a heterozygous triplet, E(0.58)/E(0.64). The slowest isoenzyme, E(0.58), is controlled by a homoeoallelic gene on the chromosome arm 6AL of T. aestivum cv. 'Chinese Spring' and is inherent in all diploid wheats, T. monococcum s. Str., T. boeoticum s. l. and T. urartu. The fastest isoenzyme, E(0.64), is presumably controlled by the B- and D-genome homoeoalleles of the bread wheat and is the commonest alloenzyme of diploid goat-grasses, including Ae. speltaides and Ae. tauschii. The tetraploid T. timopheevii s. str. has a particular heterozygous triplet E(0.56)/E(0.71), whereas the hexaploid T. zhukovskyi exhibited polymorphism with electromorphs characteristic of T. timopheevii and T. monococcum. Wild tetraploid wheats, T. dicoccoides and T. araraticum, showed partially homologous intraspecific variation of AADH-E with heterozygous triplets E(0.58)/E(0.64) (the commonest), E(0.58)/E(0.71), E(0.45)/E(0.58), E(0.48)/E(0.58) and E(0.56)/E(0.58) recorded. Polyploid goatgrasses of the D-genome group, excepting Ae. cylindrica, are fixed for the common triplet E(0.58)/E(0.64). Ae. cylindrica and polyploid goatgrasses of the C(u)-genome group, excepting Ae. kotschyi, are homozygous for E(0.64). Ae. kotschyi is exceptional, showing fixed heterozygosity for both AADH-E and ADH-A with unique triplets E(0.56)/E(0.64) and A(0.49)/A(0.56).
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Affiliation(s)
- V Jaaska
- Institute of Zoology and Botany, Academy of Sciences of the Estonian SSR, 21 Vanemuise St., 202400, Tartu, Estonian SSR (USSR)
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Schmidt JC, Seliger P, Schlegel R. Isoenzyme als biochemische markerfaktoren für roggenchromosomen. ACTA ACUST UNITED AC 1984. [DOI: 10.1016/s0015-3796(84)80078-5] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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34
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Bowman CM, Bonnard G, Dyer TA. Chloroplast DNA variation between species of Triticum and Aegilops. Location of the variation on the chloroplast genome and its relevance to the inheritance and classification of the cytoplasm. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 1983; 65:247-262. [PMID: 24263422 DOI: 10.1007/bf00308076] [Citation(s) in RCA: 58] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/1983] [Indexed: 06/02/2023]
Abstract
Restriction endonuclease analysis revealed interspecific and intraspecific variation between the chloroplast DNAs and therefore between the cytoplasms of 14 selected species of Triticum and Aegilops. Eleven distinct chloroplast DNA types were detected, the differences between them residing in the varied combination of a relatively few DNA alterations.The variation was simple enough for chloroplast DNA analysis to be used as a basis for the identification and classification of the Triticum and Aegilops cytoplasms. There was good agreement with the classification based on analysis of the phenotypic effects of the cytoplasm when combined with the T. aestivum nucleus in nuclear-cytoplasmic hybrids (Tsunewaki et al. 1976). There was however no correlation between specific chloroplast DNA alterations and any of the phenotypic effects known to be associated with specific cytoplasms.Although the diploid species examined included all those which have been suggested as possible donors of the cytoplasm and the B genome to T. aestivum, none of the chosen accessions belonged to the same cytoplasmic class as T. aestivum itself, except that of the tetraploid T. dicoccoides. Therefore, none of the diploid accessions analysed was the B genome donor. The analyses did however support several other suggestions which have been made concerning wheat ancestry. Scoring the different chloroplast DNA types according to the rarity of their banding patterns indicated that four of the eleven cytoplasms are of relatively recent origin.The DNA alterations most easily detectable by the limited comparison of the eleven Triticum/Aegilops chloroplast DNA types using only 4 endonucleases were insertions and deletions. These ranged between approximately 50 bp and 1,200 bp in size and most of them were clustered in 2 segments of the large single-copy region of the genome. Only two examples of the loss of restriction endonuclease sites through possible point mutations were observed. No variation was detected in the inverted repeat regions. Several of the deletions and insertions map close to known chloroplast protein genes, and there is also an indication that the more variable regions of the chloroplast genome may contain sequences which have allowed DNA recombination and rearrangement to occur.
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Affiliation(s)
- C M Bowman
- Plant Breeding Institute, Maris Lane, CB2 2LQ, Trumpington, Cambridge, UK
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Gale MD, Law CN, Chojecki AJ, Kempton RA. Genetic control of α-Amylase production in wheat. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 1983; 64:309-16. [PMID: 24265079 DOI: 10.1007/bf00274170] [Citation(s) in RCA: 31] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/1982] [Indexed: 05/09/2023]
Abstract
An analysis of the α-amylase isozymes in GA-treated endosperm of wheat nullisomic-tetrasomics shows that there is more variation at the α-Amy-1 and α-Amy-2 homoeoallelic loci than was previously thought. Among the 16 isozymes produced by genes on the group 7 chromosomes, most could be definitely established as products of a single homoeoallele.Inter-varietal allelic differences would be expected at such loci and clear variation was found in isozymes produced by chromosomes 6B and 7B. The latter allele, α-Amy-B2b carried by the variety 'Hope', was used to locate the enzyme structural gene within chromosome 7B relative to the centromere and five other gene markers.The nature of the α-Amy-B2b phenotype and the rare non-parental isozyme patterns found among the recombinant lines indicates that the locus is large and compound, probably involving some degree of intra-locus gene duplication.
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Affiliation(s)
- M D Gale
- Plant Breeding Institute, Maris Lane, Trumpington, Cambridge, UK
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Hexaploid Wheat (Triticum aestivum L. em Thell). ACTA ACUST UNITED AC 1983. [DOI: 10.1016/b978-0-444-42227-9.50006-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/24/2023]
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37
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Phylogenetic and Systematic Inferences from Electrophoretic Studies. ACTA ACUST UNITED AC 1983. [DOI: 10.1016/b978-0-444-42226-2.50018-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/29/2023]
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Cole EW, Fullington JG, Kasarda DD. Grain protein variability among species of Triticum and Aegilops: quantitative SDS-PAGE studies. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 1981; 60:17-30. [PMID: 24276584 DOI: 10.1007/bf00275173] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/1980] [Accepted: 12/25/1980] [Indexed: 06/02/2023]
Abstract
Total proteins were extracted from degermed seeds of various species of Triticum and Aegilops with solutions containing sodium dodecyl sulfate (SDS) and mercaptoethanol. The reduced, dissociated proteins were fractionated according to molecular weight (MW) by high-resolution polyacrylamide gel electrophoresis in buffers containing SDS (SDS-PAGE). Stained SDS-PAGE patterns were measured by densitometric scanning over a suitable range of optical density. The data were normalized to equivalent total areas for each of the densitometric scans by means of a computer program that also permitted the construction of patterns of hypothetical amphiploids by averaging patterns of two or three diploid species. The grain proteins of most species examined had distinctive qualitative and quantitative aspects that were characteristic of the species even though nearly every accession or cultivar of a species exhibited at least minor differences in pattern from other accessions or cultivars. The main protein components (probably prolamins) of Triticum monococcum ssp. monococcum, T. monococcum ssp. boeoticum, T. urartu, and Aegilops squarrosa had MW's in the range 29-36 X 10(3) whereas the most important components of Ae. speltoides, Ae. longissima, and Ae. searsii had MW's in the range 37-55 × 10(3). Changes in the quantitative expression of particular genes, especially those coding for storage protein components, may have been associated with speciation. The strong predominance of proteins with MW's in the range 29-36 × 10(3) in some accessions of AB genome tetraploids, such as T. turgidum ssp. dicoccoides, may indicate contributions to the B genome of these tetraploids by T. monococcum ssp. boeoticum, T. urartu, or Ae. squarrosa.
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Affiliation(s)
- E W Cole
- Food Proteins Research Unit, Western Regional Research Center, SEA-AR, US Department of Agriculture, Berkeley, California, USA
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Jaaska V. Electrophoretic survey of seedling esterases in wheats in relation to their phylogeny. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 1980; 56:273-284. [PMID: 24305916 DOI: 10.1007/bf00282570] [Citation(s) in RCA: 50] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/1979] [Accepted: 10/12/1979] [Indexed: 06/02/2023]
Abstract
Evolutionary and ontogenetic variation of six seedling esterases of independent genetic control is studied in polyploid wheats and their diploid relatives by means of polyacrylamide gel electrophoresis. Four of them are shown to be controlled by homoeoallelic genes in chromosomes of third, sixth and seventh homoeologous groups.The isoesterase electrophoretic data are considered supporting a monophyletic origin of both the primitive tetraploid and the primitive hexaploid wheat from which contemporary taxa of polyploid wheats have emerged polyphyletically and polytopically through recurrent introgressive hybridization and accumulation of mutations. Ancestral diploids belonging or closely related to Triticum boeoticum, T. urartu, Aegilops speltoides and Ae. tauschii ssp. strangulata are genetically the most suitable genome donors of polyploid wheats. Diploids of the Emarginata subsection of the section Sitopsis, Aegilops longissima s.str., Ae. sharonensis, Ae. searsii and Ae. bicornis, are unsuitable for the role of the wheat B genome donors, being all fixed for the esterase B and D electromorphs different from those of tetraploid wheats.
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Affiliation(s)
- V Jaaska
- Institute of Zoology and Botany, Academy of Sciences of the Estonian SSR, Tartu, Estonian SSR, USSR
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Hammer K. Vorarbeiten zur monographischen Darstellung von Wildpflanzensortimenten:Aegilops L. ACTA ACUST UNITED AC 1980. [DOI: 10.1007/bf02014641] [Citation(s) in RCA: 63] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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