1
|
Saral A, Sudha P, Muthu S, Irfan A. Spectroscopic profiling, DFT computations, molecular docking and molecular dynamic simulation of biologically active 5-isoquinolinesulfonic acid. J Biomol Struct Dyn 2023; 41:722-735. [PMID: 34882072 DOI: 10.1080/07391102.2021.2011417] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
The title compound 5-isoquinolinesulfonic acid (5IQSA) is characterized using the FT-IR, FT-Raman, NMR and UV-Vis spectra. The optimized molecular geometry, vibrational assignments, infrared intensities and Raman scattering are precisely calculated using Density Functional Theory (DFT) with the B3LYP/6-311++G(d,p) basis set. The 1H and 13C NMR chemical shifts are computed and compared with the experimental data. The TD-DFT/M062X/6-311++G(d,p) method is used to compute UV-Vis for different solvents, and the results are compared to UV-Vis spectra obtained experimentally. The HOMO-LUMO band gap energy is calculated for various solvents and compared to the band gap of UV-Vis spectra. Molecular dynamics simulations are used to investigate the biomolecular stability. Non-Linear Optical (NLO) behaviour has been illustrated using hyperpolarizability calculations. Topological studies such as Reduced Gradient Density (RDG), Electron Localization Function (ELF) and Localized Orbital Locator (LOL) are performed. The Molecular Electrostatic Potential (MEP), Natural Bond Orbital (NBO) analysis, Fukui functions and thermodynamic properties were analysed. To explore the biological behaviour of the examined compound, molecular docking was performed to evaluate the hydrogen bond distance and binding energies with (2XA4) kinase inhibitor protein.Communicated by Ramaswamy H. Sarma.
Collapse
Affiliation(s)
- A Saral
- PG and Research Department of Chemistry, Thiru. Vi. Ka. Government Arts College, Thiruvarur, Affiliated to Bharathidasan University, Tiruchirappalli, Tamil Nadu, India.,Department of Chemistry, Panimalar Institute of Technology, Chennai, Tamil Nadu, India
| | - P Sudha
- PG and Research Department of Chemistry, Thiru. Vi. Ka. Government Arts College, Thiruvarur, Tamil Nadu, India
| | - S Muthu
- Department of Physics, Arignar Anna Government Arts College, Cheyyar, Tamil Nadu, India.,Department of Physics, Puratchi Thalaivar Dr. MGR Government Arts and Science College, Uthiramerur, Tamil Nadu, India
| | - Ahmad Irfan
- Department of Chemistry, College of Science, King Khalid University, Abha, Saudi Arabia
| |
Collapse
|
2
|
Bansal R, Verduzco R, Wong MS, Westerhoff P, Garcia-Segura S. Development of nano boron-doped diamond electrodes for environmental applications. J Electroanal Chem (Lausanne) 2022. [DOI: 10.1016/j.jelechem.2022.116028] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
|
3
|
Peng J, Lou K, Goenaga G, Zawodzinski T. Transport Properties of Perfluorosulfonate Membranes Ion Exchanged with Cations. ACS APPLIED MATERIALS & INTERFACES 2018; 10:38418-38430. [PMID: 30299923 DOI: 10.1021/acsami.8b12403] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
In this work, the properties of univalent, that is, Li+, Na+, NH4+, and TEA+ form perfluorosulfonate (PFSA) membranes are studied and compared to the properties of H+ form materials. Properties of these polymer membranes including water uptake, density and conductivity, were investigated for membranes exposed to various water activity levels. The water uptake by the membranes decreased in the order H+ > Li+ > Na+ > NH4+ > TEA+, the same order as the hydration enthalpy (absolute values) of cations. Conductivity values did not strictly follow this order, indicating the importance of different factors besides the hydration level. The partial molar volume of water is derived from the density data as a function of water content for the various membrane forms. This provides further insight into the water, cation, and polymer interactions. Factors that contribute to the conductivity of these membranes include the size of cations, the electrostatic attraction between cations and sulfonate group, and the ion-dipole and hydrogen bonding interactions between cations and water. NH4+ transport is surprisingly high given the low water uptake in NH4+ form membranes. We attribute this to the ability of this ion to develop hydrogen bonded structures that helps to overcome electrostatic interactions with sulfonates. Pulsed-field gradient (PFG) nuclear magnetic resonance (NMR) was used to measure the diffusion coefficient of water in the membranes. FT-IR spectroscopy is employed to probe cation interactions with water and sulfonate sites in the polymer. Overall, the results reflect a competition between the strong electrostatic interaction between cation and sulfonate versus hydration and hydrogen bonding which vary with cation type.
Collapse
Affiliation(s)
- Jing Peng
- Department of Chemical & Biomolecular Engineering , University of Tennessee , Knoxville , Tennessee 37996 , United States
| | - Kun Lou
- Bredesen Center for Interdisciplinary Research and Education , University of Tennessee , Knoxville , Tennessee 37996 , United States
| | - Gabriel Goenaga
- Department of Chemical & Biomolecular Engineering , University of Tennessee , Knoxville , Tennessee 37996 , United States
| | - Thomas Zawodzinski
- Department of Chemical & Biomolecular Engineering , University of Tennessee , Knoxville , Tennessee 37996 , United States
- Physical Chemistry of Materials Group , Oak Ridge National Laboratory , Oak Ridge , Tennessee 37831 , United States
| |
Collapse
|
4
|
Kodama K, Motobayashi K, Shinohara A, Hasegawa N, Kudo K, Jinnouchi R, Osawa M, Morimoto Y. Effect of the Side-Chain Structure of Perfluoro-Sulfonic Acid Ionomers on the Oxygen Reduction Reaction on the Surface of Pt. ACS Catal 2017. [DOI: 10.1021/acscatal.7b03571] [Citation(s) in RCA: 81] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Kensaku Kodama
- Toyota Central R&D Laboratories, Inc., 41-1 Yokomichi, Nagakute, Aichi 480-1192, Japan
| | - Kenta Motobayashi
- Institute
for Catalysis, Hokkaido University, Sapporo 001-0021, Japan
| | - Akihiro Shinohara
- Toyota Central R&D Laboratories, Inc., 41-1 Yokomichi, Nagakute, Aichi 480-1192, Japan
| | - Naoki Hasegawa
- Toyota Central R&D Laboratories, Inc., 41-1 Yokomichi, Nagakute, Aichi 480-1192, Japan
| | - Kenji Kudo
- Toyota Central R&D Laboratories, Inc., 41-1 Yokomichi, Nagakute, Aichi 480-1192, Japan
| | - Ryosuke Jinnouchi
- Toyota Central R&D Laboratories, Inc., 41-1 Yokomichi, Nagakute, Aichi 480-1192, Japan
| | - Masatoshi Osawa
- Institute
for Catalysis, Hokkaido University, Sapporo 001-0021, Japan
| | - Yu Morimoto
- Toyota Central R&D Laboratories, Inc., 41-1 Yokomichi, Nagakute, Aichi 480-1192, Japan
| |
Collapse
|
5
|
Singh RK, Kunimatsu K, Miyatake K, Tsuneda T. Experimental and Theoretical Infrared Spectroscopic Study on Hydrated Nafion Membrane. Macromolecules 2016. [DOI: 10.1021/acs.macromol.6b00999] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Raman K. Singh
- Fuel Cell
Nanomaterials Centre, University of Yamanashi, Kofu 400-0021, Japan
| | - Keiji Kunimatsu
- Fuel Cell
Nanomaterials Centre, University of Yamanashi, Kofu 400-0021, Japan
| | - Kenji Miyatake
- Fuel Cell
Nanomaterials Centre, University of Yamanashi, Kofu 400-0021, Japan
| | - Takao Tsuneda
- Fuel Cell
Nanomaterials Centre, University of Yamanashi, Kofu 400-0021, Japan
| |
Collapse
|
6
|
Takeguchi T, Kunifuji A, Narischat N, Ito M, Noguchi H, Uosaki K, Mukai SR. Ligand effect of SnO2 on a Pt–Ru catalyst and the relationship between bond strength and CO tolerance. Catal Sci Technol 2016. [DOI: 10.1039/c5cy01523e] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Pt–Ru/SnO2/C catalysts were prepared by a rapid quenching method.
Collapse
Affiliation(s)
- Tatsuya Takeguchi
- Department of Chemistry and Biological Sciences
- Faculty of Science and Engineering
- Iwate University
- Japan
| | | | - Napan Narischat
- Department of Chemistry and Biological Sciences
- Faculty of Science and Engineering
- Iwate University
- Japan
- Graduate School of Engineering
| | - Mikio Ito
- Department of Chemical Science and Engineering
- National Institute of Technology, Tokyo College
- Hachioji
- Japan
| | - Hidenori Noguchi
- International Center for Materials Nanoarchitectonics (MANA) and Global Research Center for Environment and Energy Based on Nanomaterials Science (GREEN)
- National Institute for Materials Science
- Tsukuba 305-0044
- Japan
| | - Kohei Uosaki
- International Center for Materials Nanoarchitectonics (MANA) and Global Research Center for Environment and Energy Based on Nanomaterials Science (GREEN)
- National Institute for Materials Science
- Tsukuba 305-0044
- Japan
| | - Shin R. Mukai
- Graduate School of Engineering
- Hokkaido University
- Japan
| |
Collapse
|
7
|
Proton-conducting blend membranes of Nafion/poly(vinylphosphonic acid) for proton exchange membrane fuel cells. JOURNAL OF POLYMER RESEARCH 2013. [DOI: 10.1007/s10965-013-0217-2] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
|
8
|
Kunimatsu K, Bae B, Miyatake K, Uchida H, Watanabe M. ATR-FTIR Study of Water in Nafion Membrane Combined with Proton Conductivity Measurements during Hydration/Dehydration Cycle. J Phys Chem B 2011; 115:4315-21. [DOI: 10.1021/jp112300c] [Citation(s) in RCA: 81] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Keiji Kunimatsu
- Fuel Cell Nanomaterials Center and ‡Clean Energy Research Center, University of Yamanashi, 4 Takeda, Kofu 400-8510, Japan
| | - Byungchan Bae
- Fuel Cell Nanomaterials Center and ‡Clean Energy Research Center, University of Yamanashi, 4 Takeda, Kofu 400-8510, Japan
| | - Kenji Miyatake
- Fuel Cell Nanomaterials Center and ‡Clean Energy Research Center, University of Yamanashi, 4 Takeda, Kofu 400-8510, Japan
| | - Hiroyuki Uchida
- Fuel Cell Nanomaterials Center and ‡Clean Energy Research Center, University of Yamanashi, 4 Takeda, Kofu 400-8510, Japan
| | - Masahiro Watanabe
- Fuel Cell Nanomaterials Center and ‡Clean Energy Research Center, University of Yamanashi, 4 Takeda, Kofu 400-8510, Japan
| |
Collapse
|
9
|
Malevich D, Zamlynny V, Sun SG, Lipkowski J. In situ Infrared Reflection Absorption Spectroscopy Studies of the Interaction of Nafion® with the Pt Electrode Surface. ACTA ACUST UNITED AC 2009. [DOI: 10.1524/zpch.217.5.513.20452] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
Abstract
Infrared Reflection Absorption Spectroscopy (IRRAS) has been applied to study the nature of the co-ordination of Nafion® to a Pt electrode surface. The experiments have been carried out using a Pt electrode coated with a thin film of Nafion® assembled into a thin layer spectroelectrochemical cell. The potential modulation or the subtractively normalized interfacial Fourier transform infrared reflection spectroscopy (SNIFTIRS) experiments have been performed, in order to distinguish between the bulk properties of the Nafion® membrane and the properties of the membrane at the interace with the Pt electrode. The results showed that the interaction between the membrane and a Pt electrode resembles the interaction between a Pt electrode and a sulfuric acid solution.
Collapse
|
10
|
Warren DS, McQuillan AJ. Infrared Spectroscopic and DFT Vibrational Mode Study of Perfluoro(2-ethoxyethane) Sulfonic Acid (PES), a Model Nafion Side-Chain Molecule. J Phys Chem B 2008; 112:10535-43. [DOI: 10.1021/jp801838n] [Citation(s) in RCA: 70] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- David S. Warren
- Department of Chemistry, University of Otago, P.O. Box 56, Dunedin, New Zealand
| | - A. James McQuillan
- Department of Chemistry, University of Otago, P.O. Box 56, Dunedin, New Zealand
| |
Collapse
|
11
|
|
12
|
GRAVA WM, OKADA T, KAWANO Y. Vibrational and Thermal Characterization of H2O2 Pretreatment Effects with Perfluorinated Sulfonic Acid Ionomer Membranes. ELECTROCHEMISTRY 2006. [DOI: 10.5796/electrochemistry.74.467] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
|
13
|
Bertoncello P, Notargiacomo A, Nicolini C. Langmuir--Schaefer films of Nafion with incorporated TiO(2) nanoparticles. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2005; 21:172-177. [PMID: 15620299 DOI: 10.1021/la048837l] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
An easy method of incorporating TiO(2) nanoparticles into Nafion perfluorinated ionomer is proposed. Ultrathin films of Nafion were prepared by employing the Langmuir-Schaefer (LS) technique. The pressure-area isotherm study of a Langmuir monolayer of Nafion at the air-water interface on different concentrations of NaCl as the subphase allowed us to find the best experimental conditions for the deposition of stable Langmuir-Schaefer films. Incorporation of TiO(2) nanoparticles was performed by dipping Nafion LS films in a solution of TiO(2) nanoparticles. The uniformity of the TiO(2) incorporation was detected by UV-visible spectroscopy. The morphology of the Nafion, Nafion/TiO(2) nanoparticles thin films, and the changes due to the annealing procedure were investigated by atomic force microscopy. Interestingly, the AFM investigation showed that Nafion and Nafion/TiO(2) LS films have thermal stability up to 600 degrees C.
Collapse
Affiliation(s)
- Paolo Bertoncello
- Nanoworld Institute and Biophysics Division, University of Genoa, Corso Europa 30, 16132 Genoa, Italy.
| | | | | |
Collapse
|
14
|
Vibrational and thermal characterization of Nafion® membranes substituted by alkaline earth cations. Eur Polym J 2004. [DOI: 10.1016/j.eurpolymj.2004.02.021] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
|
15
|
|
16
|
|
17
|
|
18
|
|