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Tung NH, Hoang Anh NT, Tan CV, Hieu PT, Quang Duong P, Quang LD, Hoang VD. RETRACTED: Oleanane-Type Saponins From the Aerial Parts of Panax bipinnatifidus. Nat Prod Commun 2020. [DOI: 10.1177/1934578x20926278] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Affiliation(s)
- Nguyen Huu Tung
- Faculty of Pharmacy, PHENIKAA University, Hanoi, Vietnam
- PHENIKAA Research and Technology Institute (PRATI), A&A Green Phoenix Group, Hanoi, Vietnam
| | - Nguyen Thi Hoang Anh
- School of Chemical Engineering, Hanoi University of Science and Technology (HUST), Hanoi, Vietnam
- School of Medicine and Pharmacy, Vietnam National University, Hanoi, Vietnam
| | - Chu Van Tan
- School of Chemical Engineering, Hanoi University of Science and Technology (HUST), Hanoi, Vietnam
| | - Pham Trung Hieu
- School of Chemical Engineering, Hanoi University of Science and Technology (HUST), Hanoi, Vietnam
- Center For High Technology Development, Vietnam Academy of Science and Technology (VAST), Hanoi, Vietnam
| | - Pham Quang Duong
- Center For High Technology Development, Vietnam Academy of Science and Technology (VAST), Hanoi, Vietnam
| | - Le Dang Quang
- R&D Center of Bioactive Compounds, Vietnam Institute of Industrial Chemistry, Hanoi, Vietnam
- Institute for Tropical Technology, Vietnam Academy of Science and Technology (VAST), Hanoi, Vietnam
| | - Vu Dinh Hoang
- School of Chemical Engineering, Hanoi University of Science and Technology (HUST), Hanoi, Vietnam
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Cheng Y, Liu H, Tong X, Liu Z, Zhang X, Li D, Jiang X, Yu X. Identification and analysis of CYP450 and UGT supergene family members from the transcriptome of Aralia elata (Miq.) seem reveal candidate genes for triterpenoid saponin biosynthesis. BMC PLANT BIOLOGY 2020; 20:214. [PMID: 32404131 PMCID: PMC7218531 DOI: 10.1186/s12870-020-02411-6] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2019] [Accepted: 04/28/2020] [Indexed: 05/12/2023]
Abstract
BACKGROUND Members of the cytochrome P450 (CYP450) and UDP-glycosyltransferase (UGT) gene superfamily have been shown to play essential roles in regulating secondary metabolite biosynthesis. However, the systematic identification of CYP450s and UGTs has not been reported in Aralia elata (Miq.) Seem, a highly valued medicinal plant. RESULTS In the present study, we conducted the RNA-sequencing (RNA-seq) analysis of the leaves, stems, and roots of A. elata, yielding 66,713 total unigenes. Following annotation and KEGG pathway analysis, we were able to identify 64 unigenes related to triterpenoid skeleton biosynthesis, 254 CYP450s and 122 UGTs, respectively. A total of 150 CYP450s and 92 UGTs encoding > 300 amino acid proteins were utilized for phylogenetic and tissue-specific expression analyses. This allowed us to cluster 150 CYP450s into 9 clans and 40 families, and then these CYP450 proteins were further grouped into two primary branches: A-type (53%) and non-A-type (47%). A phylogenetic analysis of 92 UGTs and other plant UGTs led to clustering into 16 groups (A-P). We further assessed the expression patterns of these CYP450 and UGT genes across A. elata tissues, with 23 CYP450 and 16 UGT members being selected for qRT-PCR validation, respectively. From these data, we identified CYP716A295 and CYP716A296 as the candidate genes most likely to be associated with oleanolic acid synthesis, while CYP72A763 and CYP72A776 were identified as being the most likely to play roles in hederagenin biosynthesis. We also selected five unigenes as the best candidates for oleanolic acid 3-O-glucosyltransferase. Finally, we assessed the subcellular localization of three CYP450 proteins within Arabidopsis protoplasts, highlighting the fact that they localize to the endoplasmic reticulum. CONCLUSIONS This study presents a systematic analysis of the CYP450 and UGT gene family in A. elata and provides a foundation for further functional characterization of these two multigene families.
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Affiliation(s)
- Yao Cheng
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
- Key Laboratory of Biology and Genetic Improvement of Horticulture Crops (Northeast Region), Ministry of Agriculture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
| | - Hanbing Liu
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
- Key Laboratory of Biology and Genetic Improvement of Horticulture Crops (Northeast Region), Ministry of Agriculture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
| | - Xuejiao Tong
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
- Key Laboratory of Biology and Genetic Improvement of Horticulture Crops (Northeast Region), Ministry of Agriculture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
| | - Zaimin Liu
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
- Key Laboratory of Biology and Genetic Improvement of Horticulture Crops (Northeast Region), Ministry of Agriculture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
| | - Xin Zhang
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
- Key Laboratory of Biology and Genetic Improvement of Horticulture Crops (Northeast Region), Ministry of Agriculture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
| | - Dalong Li
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
- Key Laboratory of Biology and Genetic Improvement of Horticulture Crops (Northeast Region), Ministry of Agriculture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China
| | - Xinmei Jiang
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China.
- Key Laboratory of Biology and Genetic Improvement of Horticulture Crops (Northeast Region), Ministry of Agriculture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China.
| | - Xihong Yu
- College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China.
- Key Laboratory of Biology and Genetic Improvement of Horticulture Crops (Northeast Region), Ministry of Agriculture, Northeast Agricultural University, Harbin, 150030, Heilongjiang, China.
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Kim JS, Shim SH, Chae S, Han SJ, Kang SS, Son KH, Chang HW, Kim HP, Bae K. Saponins and Other Constituents from the Leaves of Aralia elata. Chem Pharm Bull (Tokyo) 2005; 53:696-700. [PMID: 15930787 DOI: 10.1248/cpb.53.696] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A new triterpenoid saponin, together with five known saponins, were isolated from the nonpolar n-hexane fraction of the leaves of Aralia elata. The structure of the new saponin, durupcoside C, was elucidated as hederagenin 3-O-beta-D-glucopyranosyl(1-->3)-beta-D-glucopyranosyl(1-->3)-alpha-L-arabinopyranoside on the basis of spectroscopic analysis. The known saponins were characterized as 3-O-alpha-L-rhamnopyranosyl(1-->2)-alpha-L-arabinopyranosyl hederagenin 28-O-beta-D-xylopyranosyl(1-->6)-beta-D-glucopyranosyl ester, hederagenin 3-O-beta-D-glucopyranosyl(1-->3)-alpha-L-rhamnopyranosyl(1-->2)-alpha-L-arabinopyranoside, oleanolic acid 3-O-beta-D-glucopyranosyl(1-->3)-alpha-L-rhamnopyranosyl(1-->2)-alpha-L-arabinopyranoside, hederagenin 3-O-alpha-L-rhamnopyranosyl(1-->2)-alpha-L-arabinopyranoside (alpha-hederin), and hederagenin 3-O-beta-D-glucopyranosyl(1-->3)-alpha-L-arabinopyranoside (collinsonidin). In addition, two known lipids, Arisaema glyceride 3 and ceramide mixtures were also isolated and characterized. Collinsonidin and two known lipids were isolated for the first time from this plant.
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Affiliation(s)
- Ju Sun Kim
- Natural Products Research Institute and College of Pharmacy, Seoul National University, Seoul 110-460, Korea
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