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Pyrazole‐Clubbed Piperazinyl Urea Derivatives: Synthesis, Characterization and Antimicrobial Studies toward Generating an Antibiotic/Antifungal Resistance Sensor. ChemistrySelect 2023. [DOI: 10.1002/slct.202204419] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
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2
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Evecen M, Çelik F, Bektaş E, Güler Hİ, Ünver Y. Experimental and Theoretical Investigations, Enzyme inhibition activity and Docking Study of 5-methyl-4-(2-(piperazin-1-yl)ethyl)-2,4-dihydro-3H-1,2,4-triazol-3-one. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.134679] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
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3
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Acar Çevik U, Celik I, Işık A, Gül ÜD, Bayazıt G, Bostancı HE, Özkay Y, Kaplancıklı ZA. Synthesis, and docking studies of novel tetrazole-S-alkyl derivatives as antimicrobial agents. PHOSPHORUS SULFUR 2022. [DOI: 10.1080/10426507.2022.2117812] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Affiliation(s)
- Ulviye Acar Çevik
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Anadolu University, Eskişehir, Turkey
| | - Ismail Celik
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Erciyes University, Kayseri, Turkey
| | - Ayşen Işık
- Department of Biochemistry, Faculty of Science, Selçuk University, Konya, Turkey
| | - Ülküye Dudu Gül
- Department of Bioengineering, Faculty of Engineering, Bilecik Seyh Edebali University, Bilecik, Turkey
| | - Gizem Bayazıt
- Department of Biotechnology, Institute of Graduate Studies, Bilecik Seyh Edebali University, Bilecik, Turkey
| | - Hayrani Eren Bostancı
- Department of Biochemistry, Faculty of Pharmacy, Sivas Cumhuriyet University, Sivas, Turkey
| | - Yusuf Özkay
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Anadolu University, Eskişehir, Turkey
| | - Zafer Asım Kaplancıklı
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Anadolu University, Eskişehir, Turkey
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Cakmak U, Oz-Tuncay F, Basoglu-Ozdemir S, Ayazoglu-Demir E, Demir İ, Colak A, Celik-Uzuner S, Erdem SS, Yildirim N. Synthesis of hydrazine containing piperazine or benzimidazole derivatives and their potential as α-amylase inhibitors by molecular docking, inhibition kinetics and in vitro cytotoxicity activity studies. Med Chem Res 2021. [DOI: 10.1007/s00044-021-02785-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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Cebeci YU, Ceylan S, Demirbas N, Karaoğlu ŞA. Microwave-assisted Synthesis of Novel Mannich Base and Conazole Derivatives Containing Biologically Active Pharmacological Groups. LETT DRUG DES DISCOV 2021. [DOI: 10.2174/1570180817999201016154034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Background:
The aim of this study was to synthesize new mannich bases and conazol
derivatives with biological activity by the microwave-assisted method.
Introduction:
1,2,4-Triazole-3-one (3) acquired from tryptamine was transformed to the corresponding
carbox(thio)amides (6a-c) via several steps. Compounds 6a-c were refluxed with sodium hydroxide
to yield 1,2,4-triazole derivatives (7a-c). Compounds 3 and 7a-c on treatment with different
heterocyclic secondary amines in an ambiance with formaldehyde afforded the mannich bases 8-15
having diverse pharmacophore units with biologically active sites. The reaction of compound 3 and
2-bromo-1-(4-chlorophenyl) ethanone in the presence of sodium ethoxide gave the corresponding
product 2-substituted-1,2,4-triazole-3-one, 16, which was reduced to 1,2,4-triazoles (17). Synthesis
of compounds 18, 19, and 20 was carried out starting from compounds 17 with 4-chlorobenzyl
chloride (for 18), 2,4-dichlorobenzyl chloride (for 19), and 2,6-dichlorobenzyl chloride (for 20).
Methods:
he conventional technique was utilized for the synthesis of compounds, 3-7, and microwave-
assisted technique for the compounds, 8-20. That is, green chemistry techniques were applied
during these reactions. The structures of molecules were elucidated on the foundation of 1H NMR,
13C NMR, FT-IR, EI-MS methods, and elemental analysis. Novel synthesized molecules were investigated
for their antimicrobial activity using MIC (minimum inhibitory concentration) method.
Results:
Aminoalkylation of triazole derivatives 3 and 7a-c with fluoroquinolones such as ciprofloxacin
and norfloxacin provided an enhancement to the bioactivity of mannich bases 8-11 against
the tested microorganisms. The MIC values ranged between <0.24 and 3.9 μg/mL. Moreover, molecules
10 and 11 exhibited more effects on M. smegmatis than the other compounds by the MIC
values of <1 μg/mL. They have shown very good antituberculosis activity.
Conclusion:
Most of the synthesized structures were observed to have excellent antimicrobial activity
against most microorganisms taken into account. These molecules have better activity than the
standard drug ampicillin and streptomycin.
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Affiliation(s)
- Yıldız Uygun Cebeci
- Department of Chemistry, Karadeniz Technical University, 61080, Trabzon,Turkey
| | - Sule Ceylan
- Artvin Çoruh University, Department of Occupational Health and Safety, 08000, Artvin,Turkey
| | - Neslihan Demirbas
- Department of Chemistry, Karadeniz Technical University, 61080, Trabzon,Turkey
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Direct synthesis of N-substituted 1,3-oxazolidines via a hetero-domino Petasis borono-Mannich reaction of 1,2-amino alcohols, formaldehyde, and organoboronic acids. Chem Heterocycl Compd (N Y) 2019. [DOI: 10.1007/s10593-019-02511-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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Mermer A, Faiz O, Demirbas A, Demirbas N, Alagumuthu M, Arumugam S. Piperazine-azole-fluoroquinolone hybrids: Conventional and microwave irradiated synthesis, biological activity screening and molecular docking studies. Bioorg Chem 2019; 85:308-318. [PMID: 30654222 DOI: 10.1016/j.bioorg.2019.01.009] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Revised: 01/01/2019] [Accepted: 01/06/2019] [Indexed: 01/18/2023]
Abstract
A series of new 1,2,4-triazole and 1,3,4-oxadiazole derivatives was obtained via several steps sequential reactions of phenyl piperazine. Then, these compounds were converted to the corresponding fluoroquinolone hybrids via one pot three component Mannich reaction. All the reactions were examined under conventional and microwave mediated conditions, and optimum conditions were determined. The effect of different solvents and microwave power on microwave prompted reactions was investigated as well. All the newly synthesized compounds were characterized by FTIR, 1H NMR, 13C NMR and EI MS spectral techniques. The antimicrobial activity, DNA gyrase and Topoisomerase IV inhibition potentials were performed. The results obtained showed that fluoroquinolone hybrids possess good antimicrobial activity. Moreover, Fluoroquinolone-azole-piperazine hybrids synthesized in the present study displayed excellent DNA gyrase inhibition. To unveil the interaction mode of compounds to receptor, a molecular docking study was performed. With an average least binding energy of -9.5 kcal/mol, all compounds were found to have remarkable inhibitory potentials against DNA gyrase (E. coli).
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Affiliation(s)
- Arif Mermer
- Karadeniz Technical University, Department of Chemistry 61080 Trabzon, Turkey
| | - Ozlem Faiz
- Recep Tayyip Erdogan University, Department of Chemistry, 53100 Rize, Turkey
| | - Ahmet Demirbas
- Karadeniz Technical University, Department of Chemistry 61080 Trabzon, Turkey
| | - Neslihan Demirbas
- Karadeniz Technical University, Department of Chemistry 61080 Trabzon, Turkey.
| | - Manikandan Alagumuthu
- Dept. of Biotechnology, School of Bio-Sciences and Technology, VIT, Vellore 632014, India
| | - Sivakumar Arumugam
- Dept. of Biotechnology, School of Bio-Sciences and Technology, VIT, Vellore 632014, India
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Mermer A, Demirbas N, Colak A, Demir EA, Kulabas N, Demirbas A. One‐pot, Four‐Component Green Synthesis, Carbonic Anhydrase II Inhibition and Docking Studies of 5‐Arylidenerhodanines. ChemistrySelect 2018. [DOI: 10.1002/slct.201802677] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Arif Mermer
- Karadeniz Technical UniversityDepartment of Chemistry 61080 Trabzon TURKEY
| | - Neslihan Demirbas
- Karadeniz Technical UniversityDepartment of Chemistry 61080 Trabzon TURKEY
| | - Ahmet Colak
- Karadeniz Technical UniversityDepartment of Chemistry 61080 Trabzon TURKEY
| | | | - Necla Kulabas
- Department of Pharmaceutical ChemistryFaculty of PharmacyMarmara University Haydarpaşa 34668 İstanbul TURKEY
| | - Ahmet Demirbas
- Karadeniz Technical UniversityDepartment of Chemistry 61080 Trabzon TURKEY
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9
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Basoglu Ozdemir S, Demirbas N, Demirbas A, Ayaz FA, Çolak N. Microwave‐Assisted Synthesis, Antioxidant, and Antimicrobial Evaluation of Piperazine‐Azole‐Fluoroquinolone Based 1,2,4‐Triazole Derivatives. J Heterocycl Chem 2018. [DOI: 10.1002/jhet.3336] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Serap Basoglu Ozdemir
- Department of Chemistry, Faculty of ScienceKaradeniz Technical University Trabzon Turkey
| | - Neslihan Demirbas
- Department of Chemistry, Faculty of ScienceKaradeniz Technical University Trabzon Turkey
| | - Ahmet Demirbas
- Department of Chemistry, Faculty of ScienceKaradeniz Technical University Trabzon Turkey
| | - Faik Ahmet Ayaz
- Department of Biology, Faculty of ScienceKaradeniz Technical University Trabzon Turkey
| | - Nesrin Çolak
- Department of Biology, Faculty of ScienceKaradeniz Technical University Trabzon Turkey
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10
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Cebeci YU, Ozdemir SB, Ceylan S, Bayrak H, Demirbas A, Alpay-Karaoglu S, Demirbas N. Microwave-Assisted Synthesis of Some Hybrid Molecules Derived from Morpholine and Investigation of Their Antimicrobial Activities. ChemistrySelect 2017. [DOI: 10.1002/slct.201702097] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Yıldız Uygun Cebeci
- Department of Chemistry; Karadeniz Technical University, Department of Chemistry; 61080 Trabzon Turkey
| | - Serap Basoglu Ozdemir
- Department of Chemistry; Karadeniz Technical University, Department of Chemistry; 61080 Trabzon Turkey
| | - Sule Ceylan
- Department of Occupational Health and Safety; ArtvinCoruh University; Artvin Turkey
| | - Hacer Bayrak
- Department of Chemistry and Chemical Processing Technology; Karadeniz Technical University; Trabzon Turkey
| | - Ahmet Demirbas
- Department of Chemistry; Karadeniz Technical University, Department of Chemistry; 61080 Trabzon Turkey
| | | | - Neslihan Demirbas
- Department of Chemistry; Karadeniz Technical University, Department of Chemistry; 61080 Trabzon Turkey
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Li Q, Chen P, Yang H, Luo M, You W, Zhao P. Synthesis, antiproliferative evaluation, and structure–activity relationships of novel triazole–isoindoline hybrids bearing 3,4,5-trimethoxyphenyl moiety. CHEMICAL PAPERS 2017. [DOI: 10.1007/s11696-017-0311-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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12
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Basoglu Ozdemir S, Uygun Cebeci Y, Bayrak H, Mermer A, Ceylan S, Demirbas A, Alpay Karaoglu S, Demirbas N. Synthesis and antimicrobial activity of new piperazine-based heterocyclic compounds. HETEROCYCL COMMUN 2017. [DOI: 10.1515/hc-2016-0125] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
AbstractThe hydrazide
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Demirci S, Mermer A, Ak G, Aksakal F, Colak N, Demirbas A, Ayaz FA, Demirbas N. Conventional and Microwave‐assisted Total Synthesis, Antioxidant Capacity, Biological Activity, and Molecular Docking Studies of New Hybrid Compounds. J Heterocycl Chem 2016. [DOI: 10.1002/jhet.2760] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Serpil Demirci
- Department of Crop Production and Technology, Bulancak Kadir Karabas School of Applied ScienceGiresun University 28000 Giresun Turkey
| | - Arif Mermer
- Department of ChemistryKaradeniz Technical University 61080 Trabzon Turkey
| | - Gokhan Ak
- Department of BiologyRecep Tayyip Erdoğan University 53100 Rize Turkey
| | - Fatma Aksakal
- Department of ChemistryGebze Technical University 41400 Kocaeli Turkey
| | - Nesrin Colak
- Department of BiologyKaradeniz Technical University 61080 Trabzon Turkey
| | - Ahmet Demirbas
- Department of ChemistryKaradeniz Technical University 61080 Trabzon Turkey
| | - Faik Ahmet Ayaz
- Department of BiologyKaradeniz Technical University 61080 Trabzon Turkey
| | - Neslihan Demirbas
- Department of ChemistryKaradeniz Technical University 61080 Trabzon Turkey
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Synthesis and biological evaluation of new Mannich and Schiff bases containing 1,2,4-triazole and 1,3,4-oxadiazole nucleus. Med Chem Res 2016. [DOI: 10.1007/s00044-016-1640-9] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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