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Zahrebelnei F, Lima D, de Lara LS, Gryczak DW, Carmo TASD, Urrea-Valencia S, Galvão CW, Etto RM, Pessôa CA, Wohnrath K. A sensitive electrochemical DNA biosensor for detecting the genome of a plant growth-promoting bacteria. Talanta 2025; 286:127484. [PMID: 39755076 DOI: 10.1016/j.talanta.2024.127484] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2024] [Revised: 12/14/2024] [Accepted: 12/26/2024] [Indexed: 01/06/2025]
Abstract
The challenge of increasing food production while maintaining environmental sustainability can be addressed by using biofertilizers such as Azospirillum, which can enhance plant growth and colonize more than 100 plant species. The success of this biotechnology depends on the amount of plant growth-promoting bacteria associated with the plant during crop development. However, monitoring bacterial population dynamics after inoculation requires time-consuming, laborious, and costly procedures. To address these issues, this study describes an effective electrochemical DNA biosensor to detect Azospirillum brasilense. The biosensor comprises a glassy carbon electrode modified with a nanocomposite based on carbon nanotubes and gold nanoparticles capped with 3-n-propylpyridinium chloride silsesquioxane, followed by the immobilization of a thiolated probe oligonucleotide that binds specifically to the A. brasilense genome (AZOgenome). The nanocomposite was characterized utilizing spectroscopic and morphological methods. Its presence on the biosensor's surface enhanced electrochemical responses due to its excellent electrocatalytic properties, as observed during electrochemical impedance spectroscopy and cyclic voltammetry experiments. The biosensor enabled the detection of AZOgenome after the hybridization event, which alters the electrochemical response of the electrode and was rapidly detected by square wave voltammetry. The detection range of the bacterial genome was 1.17 pmol L-1 to 146.8 pmol L-1, with LOD and LOQ of 0.261 and 0.322 pmol L-1, respectively, and sensitivity of -15.560 μA/log [AZOgenome] (pmol L-1). The biosensor showed good selectivity and reproducibility, with a coefficient of variation of -5.69 %, in addition to satisfactory sensitivity and stability for up to seven weeks. These promising analytical features allowed the quantification of A. brasilense in low concentrations in soil metagenomic DNA samples.
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Affiliation(s)
- Felipe Zahrebelnei
- Department of Chemistry, State University of Ponta Grossa, Ponta Grossa, CEP 84030-900, PR, Brazil
| | - Dhésmon Lima
- Department of Chemistry and Physics, Faculty of Arts and Science, Mount Saint Vincent University, 166 Bedford Highway, B3M 2J6, Halifax, Nova Scotia, Canada
| | - Lucas Stori de Lara
- Department of Physics, State University of Ponta Grossa, Ponta Grossa, CEP 84030-900, PR, Brazil
| | - Derik William Gryczak
- Department of Physics, State University of Ponta Grossa, Ponta Grossa, CEP 84030-900, PR, Brazil
| | - Taiza Alissul Sauer do Carmo
- Academic Department of Mathematic, Federal Technological University of Paraná - Campus Ponta Grossa, Ponta Grossa, 84016-210, PR, Brazil
| | - Salomé Urrea-Valencia
- Microbial Molecular Biology Laboratory, State University of Ponta Grossa, Ponta Grossa, CEP 84030-900, PR, Brazil
| | - Carolina Weigert Galvão
- Microbial Molecular Biology Laboratory, State University of Ponta Grossa, Ponta Grossa, CEP 84030-900, PR, Brazil
| | - Rafael Mazer Etto
- Department of Chemistry, State University of Ponta Grossa, Ponta Grossa, CEP 84030-900, PR, Brazil; Microbial Molecular Biology Laboratory, State University of Ponta Grossa, Ponta Grossa, CEP 84030-900, PR, Brazil
| | | | - Karen Wohnrath
- Department of Chemistry, State University of Ponta Grossa, Ponta Grossa, CEP 84030-900, PR, Brazil.
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Karnwal A, Kumar Sachan RS, Devgon I, Devgon J, Pant G, Panchpuri M, Ahmad A, Alshammari MB, Hossain K, Kumar G. Gold Nanoparticles in Nanobiotechnology: From Synthesis to Biosensing Applications. ACS OMEGA 2024; 9:29966-29982. [PMID: 39035946 PMCID: PMC11256298 DOI: 10.1021/acsomega.3c10352] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/25/2023] [Revised: 06/15/2024] [Accepted: 06/19/2024] [Indexed: 07/23/2024]
Abstract
Nanobiotechnology has ushered in a new era of scientific discovery where the unique properties of nanomaterials, such as gold nanoparticles, have been harnessed for a wide array of applications. This review explores gold nanoparticles' synthesis, properties, and multidisciplinary applications, focusing on their role as biosensors. Gold nanoparticles possess exceptional physicochemical attributes, including size-dependent optical properties, biocompatibility, and ease of functionalization, making them promising candidates for the development of biosensing platforms. The review begins by providing a comprehensive overview of gold nanoparticle synthesis techniques, highlighting the advantages and disadvantages of various approaches. It then delves into the remarkable properties that underpin their success in biosensing, such as localized surface plasmon resonance and enhanced surface area. The discussion also includes the functionalization strategies that enable specific binding to biomolecules, enhancing the sensitivity and selectivity of gold-nanoparticle-based biosensors. Furthermore, this review surveys the diverse applications of gold nanoparticles in biosensing, encompassing diagnostics, environmental monitoring, and drug delivery. The multidisciplinary nature of these applications underscores the versatility and potential of gold nanoparticles in addressing complex challenges in healthcare and environmental science. The review emphasizes the pressing need for further exploration and research in the field of nanobiotechnology, particularly regarding the synthesis, properties, and biosensing applications of gold nanoparticles. With their exceptional physicochemical attributes and versatile functionalities, gold nanoparticles present a promising avenue for addressing complex challenges in healthcare and environmental science, making it imperative to advance our understanding of their synthesis, properties, and applications for enhanced biosensing capabilities and broader scientific innovation.
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Affiliation(s)
- Arun Karnwal
- School
of Bioengineering & Biosciences, Lovely
Professional University, Phagwara 144411, Punjab, India
| | - Rohan Samir Kumar Sachan
- School
of Bioengineering & Biosciences, Lovely
Professional University, Phagwara 144411, Punjab, India
| | - Inderpal Devgon
- School
of Bioengineering & Biosciences, Lovely
Professional University, Phagwara 144411, Punjab, India
| | - Jyotsna Devgon
- Centre
for Interdisciplinary Biomedical Research, Adesh University, Bathinda 151101, Punjab, India
| | - Gaurav Pant
- Department
of Microbiology, Graphic Era (Deemed to
be University), Dehradun 248009, Uttarakhand, India
| | - Mitali Panchpuri
- School
of Pharmaceutical and Population Health Informatics, DIT University, Dehradun 248009, Uttarakhand, India
| | - Akil Ahmad
- Department
of Chemistry, College of Science and Humanities in Al-Kharj, Prince Sattam bin Abdulaziz University, Al-Kharj 11942, Saudi Arabia
| | - Mohammed B. Alshammari
- Department
of Chemistry, College of Science and Humanities in Al-Kharj, Prince Sattam bin Abdulaziz University, Al-Kharj 11942, Saudi Arabia
| | - Kaizar Hossain
- Department
of Environmental Science, Asutosh College,
University of Calcutta, 92, Shyama Prasad Mukherjee Rd, Bhowanipore, Kolkata 700026, West
Bengal, India
| | - Gaurav Kumar
- School
of Bioengineering & Biosciences, Lovely
Professional University, Phagwara 144411, Punjab, India
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Habib A, Bibi Y, Qayyum I, Farooq M. Hierarchical plant extracts in silver nanoparticles preparation: Minuscular survey to achieve enhanced bioactivities. Heliyon 2024; 10:e24303. [PMID: 38293495 PMCID: PMC10824772 DOI: 10.1016/j.heliyon.2024.e24303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Revised: 01/04/2024] [Accepted: 01/05/2024] [Indexed: 02/01/2024] Open
Abstract
Extracts obtained from M. longifolia (Lamiaceae) and R. ellipticus (Rosaceae) were selected to utilize in the reduction and stabilization of silver nanoparticles (AgNPs) for achieving remarkable bioactivities. In brief, the cytotoxic potential of the as synthesize AgNPs was high at higher concentrations. In DPPH assay, maximum antioxidant potential was shown by AgNPs synthesized from M. longifolia. Meanwhile, Methanolic extracts exhibited more antioxidant potential than chloroform based extracts. Further, brine shrimp lethality assay was carried out to achieve 34.6 μg/mL & 25.65 μg/mL LD50 values against the NPs prepared from M. and R., respectively. In addition, antioxidant activities were carried by ABTS Radical cation assay where 38.6 μg/mL and 47 μg/mL IC50 values were obtained for the NPs obtained from M. longifolia and R. ellipticus, respectively. Reducing power assay (0.370-0.15 and 0.37-0.26 mean absorbance) and DPPH (% scavenging: 88.91-46.48 and 88.91-44.78) percentages were recorded for M. and R. synthesized AgNPs, respectively. In brief, M. longifolia functionalized particles performed better in comparison to R. ellipticus treated particles. In addition, the nano assembly dispersed in polar solvent demonstrated better results in comparison to non-polar solvents. In conclusion, the as synthesized AgNPs were better in bioactivities than crude extracts of the selected plants. In future, this work could be extended to isolating active components for the nanofabrication of biologically intelligent nanoparticles for pharmacological interest. In the proposed investigation, the purified bioactivities fractions would be highlighted for further consideration in various medical treatments.
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Affiliation(s)
- Aroosa Habib
- Department of Plant Sciences, Quaid- i- Azam University Islamabad, 45320, Pakistan
| | - Yamin Bibi
- Department of Botany, PMAS-Arid Agriculture University Rawalpindi, 46300, Pakistan
| | - Iqra Qayyum
- Department of Plant Sciences, Quaid- i- Azam University Islamabad, 45320, Pakistan
| | - Muhammad Farooq
- Pakistan Council of Scientific and Industrial Research (PCSIR), Ministry of Science and Technology, 1-Constitution Avenue, Sector G-5/2, Islamabad, 44000, Pakistan
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Azizi H, Akbari N, Kheirandish F, Sepahvand A. Biogenic synthesized copper oxide nanoparticles by Bacillus subtilis: Investigating antibacterial activity on the mexAB-oprM efflux pump genes and cytotoxic effect on MCF-7 cells. J Basic Microbiol 2023; 63:960-970. [PMID: 37189220 DOI: 10.1002/jobm.202200718] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2022] [Revised: 02/19/2023] [Accepted: 03/04/2023] [Indexed: 05/17/2023]
Abstract
One of the main characteristics of Pseudomonas aeruginosa is remarkable intrinsic antibiotic resistance which is associated with production of β-lactamases and the expression of inducible efflux pumps. Nanoparticles (NPs) are a novel option for coping with this resistant bacteria. Hence, the aim of present study was production of CuO NPs via Bacillus subtilis and applied them to deal with resistant bacteria. For this purpose, first NPs were synthesized and were analyzed with different standard techniques containing scanning electron microscope, Fourier-transform infrared spectroscopy, and X-ray powder diffraction. Microdilution Broth Method and real-time polymerase chain reaction were used to antibacterial properties of the CuO NPs and expression of mexAB-oprM in clinical samples of P. aeruginosa, respectively. The cytotoxic effect of CuO NPs was also evaluated on MCF7 as a breast cancer cell line. Finally, the data were analyzed by one-way analysis of variance and Tukey's tests. The size of CuO NPs was in the range of 17-26 nm and showed antibacterial effect at <1000 μg/mL concentrations. Our evidence noted that the antibacterial effects of the CuO NPs occurred through the downregulation of mexAB-oprM and upregulation of mexR. The interesting point was that CuO NPs had an inhibitory effect on MCF7 cell lines with the optimal inhibition concentration at IC50 = 25.73 µg/mL. Therefore, CuO NPs can be considered as a promising medical candidate in the pharmaceutical industry.
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Affiliation(s)
- Hossein Azizi
- Department of Microbiology, Arak Branch, Islamic Azad University, Arak, Iran
| | - Neda Akbari
- Department of Microbiology, Arak Branch, Islamic Azad University, Arak, Iran
| | - Farnaz Kheirandish
- Department of Microbiology, Arak Branch, Islamic Azad University, Arak, Iran
- Department of Medical Parasitology and Mycology, Faculty of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran
- Department of Medical Biotechnology, Faculty of Medicine, Khorramabad, Iran
| | - Asghar Sepahvand
- Department of Microbiology, Arak Branch, Islamic Azad University, Arak, Iran
- Department of Medical Parasitology and Mycology, Faculty of Medicine, Lorestan University of Medical Sciences, Khorramabad, Iran
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Rajab N, Ibrahim H, Hassan RYA, Youssef AFA. Selective determination of nitrite in water and food samples using zirconium oxide (ZrO 2)@MWCNTs modified screen printed electrode. RSC Adv 2023; 13:21259-21270. [PMID: 37465573 PMCID: PMC10350638 DOI: 10.1039/d3ra03448h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 07/06/2023] [Indexed: 07/20/2023] Open
Abstract
Nitrite ions are being used in different forms as food preservatives acting as flavor enhancers or coloring agents for food products. However, continuous ingestion of nitrite may have severe health implications due to its mutagenic and carcinogenic effects. Thus, this study constructed an electrochemical assay using disposable nano-sensor chip ZrO2@MWCNTs screen printed electrodes (SPE) for the rapid, selective, and sensitive determination of nitrite in food and water samples. As a sensing platform, the use of nanomaterials, including metal oxide nanostructures and carbon nanotubes, exhibited a superior electrocatalytic activity and conductivity. Morphological, structural, and electrochemical analyses were performed using electron microscopy (SEM and TEM), Fourier-transform infrared (FTIR) spectroscopy, electrochemical impedance spectroscopy (EIS), cyclic voltammetry (CV) and chronoamperometry (CA). Accordingly, a wide dynamic linear range (5.0 μM to 100 μM) was obtained with a limit of detection of 0.94 μM by the chronoamperometric technique. In addition, the sensor's selectivity was tested when several non-target species were exposed to the sensor chips while no obvious electrochemical signals were generated when the nitrite ions were not present. Eventually, real food and water sample analysis was conducted, and a high recovery was achieved.
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Affiliation(s)
- Nadeen Rajab
- University of Science and Technology (UST), Zewail City of Science and Technology Giza 12578 Egypt
| | - Hosny Ibrahim
- Chemistry Department, Faculty of Science, Cairo University Giza 12613 Egypt
| | - Rabeay Y A Hassan
- University of Science and Technology (UST), Zewail City of Science and Technology Giza 12578 Egypt
| | - Ahmed F A Youssef
- University of Science and Technology (UST), Zewail City of Science and Technology Giza 12578 Egypt
- Chemistry Department, Faculty of Science, Cairo University Giza 12613 Egypt
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