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Zhou G, Huang L. A review of recent advances in computational and experimental analysis of first adsorbed water layer on solid substrate. MOLECULAR SIMULATION 2020. [DOI: 10.1080/08927022.2020.1786086] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Guobing Zhou
- School of Chemical, Biological and Materials Engineering, University of Oklahoma, Norman, OK, USA
| | - Liangliang Huang
- School of Chemical, Biological and Materials Engineering, University of Oklahoma, Norman, OK, USA
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2
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Galparsoro O, Pétuya R, Busnengo F, Juaristi JI, Crespos C, Alducin M, Larregaray P. Hydrogen abstraction from metal surfaces: when electron-hole pair excitations strongly affect hot-atom recombination. Phys Chem Chem Phys 2018; 18:31378-31383. [PMID: 27827490 DOI: 10.1039/c6cp06222a] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Using molecular dynamics simulations, we predict that the inclusion of nonadiabatic electronic excitations influences the dynamics of preadsorbed hydrogen abstraction from the W(110) surface by hydrogen scattering. The hot-atom recombination, which involves hyperthermal diffusion of the impinging atom on the surface, is significantly affected by the dissipation of energy mediated by electron-hole pair excitations at low coverage and low incidence energy. This issue is of importance as this abstraction mechanism is thought to largely contribute to molecular hydrogen formation from metal surfaces.
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Affiliation(s)
- Oihana Galparsoro
- CNRS, ISM, UMR5255, F-33400 Talence, France. and Université de Bordeaux, ISM, UMR 5255, F-33400 Talence, France and Donostia International Physics Center (DIPC), Paseo Manuel de Lardizabal 4, 20018 Donostia-San Sebastián, Spain
| | - Rémi Pétuya
- Donostia International Physics Center (DIPC), Paseo Manuel de Lardizabal 4, 20018 Donostia-San Sebastián, Spain
| | - Fabio Busnengo
- Instituto de Física Rosario (IFIR) CONICET-UNR, Esmeralda y Ocampo, 2000 Rosario, Argentina
| | - Joseba Iñaki Juaristi
- Donostia International Physics Center (DIPC), Paseo Manuel de Lardizabal 4, 20018 Donostia-San Sebastián, Spain and Departamento de Física de Materiales, Facultad de Químicas (UPV/EHU), Apartado 1072, 20080 Donostia-San Sebastián, Spain and Centro de Física de Materiales CFM/MPC (CSIC-UPV/EHU), Paseo Manuel de Lardizabal 5, 20018 Donostia-San Sebastián, Spain
| | - Cédric Crespos
- CNRS, ISM, UMR5255, F-33400 Talence, France. and Université de Bordeaux, ISM, UMR 5255, F-33400 Talence, France
| | - Maite Alducin
- Donostia International Physics Center (DIPC), Paseo Manuel de Lardizabal 4, 20018 Donostia-San Sebastián, Spain and Centro de Física de Materiales CFM/MPC (CSIC-UPV/EHU), Paseo Manuel de Lardizabal 5, 20018 Donostia-San Sebastián, Spain
| | - Pascal Larregaray
- CNRS, ISM, UMR5255, F-33400 Talence, France. and Université de Bordeaux, ISM, UMR 5255, F-33400 Talence, France
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Wang W, Zhao Y. The direct and precursor mediated dissociation rates of H2 on a Ni(111) surface. Phys Chem Chem Phys 2015; 17:5901-12. [PMID: 25630487 DOI: 10.1039/c4cp05624h] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The dissociation and recombination rates of physisorbed H2, and the direct and steady state dissociation (i.e., the precursor mediated dissociation) rates of gas phase H2 on Ni(111), as well as the corresponding kinetic isotope effects, are calculated using the quantum instanton method, together with path integral Monte Carlo and adaptive umbrella sampling techniques. All these rates except the recombination one first decrease and then increase with the increasing temperature, and their minimum values appear at about 250, 300 and 250 K, respectively. These non-monotonic behaviors reveal that the quantum effect of H2 should be very remarkable at low temperatures. The steady state rates are smaller than the direct rates at low temperatures, however, they become larger than the direct ones at high temperatures, these two kinds of rates become equal at about 400 and 300 K on the rigid and quantum lattices, respectively. The quantum motion of the lattice can enhance the direct and steady state rates, and it increases the steady state rate much more than the direct one, for instance, the direct and steady state rates on the quantum lattice are 1.30 and 2.08 times larger than that on the rigid one at 300 K. The calculated kinetic isotope effects are much larger than 1, which reveals that H2 always has a larger rate than that of D2, and the direct process predicts much larger kinetic isotope effects than the steady state process at low temperatures. In addition, the kinetic isotope effects are not affected by the lattice motion.
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Affiliation(s)
- Wenji Wang
- College of Science, Northwest A&F University, Yangling, 712100, Shaanxi Province, P. R. China.
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Pétuya R, Larrégaray P, Crespos C, Busnengo HF, Martínez AE. Dynamics of H2 Eley-Rideal abstraction from W(110): Sensitivity to the representation of the molecule-surface potential. J Chem Phys 2014; 141:024701. [DOI: 10.1063/1.4885139] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- R. Pétuya
- Université de Bordeaux, ISM, CNRS UMR 5255, 33405 Talence Cedex, France
- CNRS, ISM, UMR5255, F-33400 Talence, France
| | - P. Larrégaray
- Université de Bordeaux, ISM, CNRS UMR 5255, 33405 Talence Cedex, France
- CNRS, ISM, UMR5255, F-33400 Talence, France
| | - C. Crespos
- Université de Bordeaux, ISM, CNRS UMR 5255, 33405 Talence Cedex, France
- CNRS, ISM, UMR5255, F-33400 Talence, France
| | - H. F. Busnengo
- Instituto de Física Rosario (IFIR) CONICET-UNR. Ocampo y Esmeralda (2000) Rosario, Argentina
| | - A. E. Martínez
- Instituto de Física Rosario (IFIR) CONICET-UNR. Ocampo y Esmeralda (2000) Rosario, Argentina
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Density Functional Theory Beyond the Generalized Gradient Approximation for Surface Chemistry. Top Curr Chem (Cham) 2014. [DOI: 10.1007/128_2014_555] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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7
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Wang W, Zhao Y. Dissociation rates of H2on a Ni(100) surface: the role of the physisorbed state. Phys Chem Chem Phys 2014; 16:13318-28. [DOI: 10.1039/c4cp01705f] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Quintas-Sánchez E, Crespos C, Larrégaray P, Rayez JC, Martin-Gondre L, Rubayo-Soneira J. Surface temperature effects on the dynamics of N2 Eley-Rideal recombination on W(100). J Chem Phys 2013; 138:024706. [PMID: 23320712 DOI: 10.1063/1.4774024] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Quasiclassical trajectories simulations are performed to study the influence of surface temperature on the dynamics of a N atom colliding a N-preadsorbed W(100) surface under normal incidence. A generalized Langevin surface oscillator scheme is used to allow energy transfer between the nitrogen atoms and the surface. The influence of the surface temperature on the N(2) formed molecules via Eley-Rideal recombination is analyzed at T = 300, 800, and 1500 K. Ro-vibrational distributions of the N(2) molecules are only slightly affected by the presence of the thermal bath whereas kinetic energy is rather strongly decreased when going from a static surface model to a moving surface one. In terms of reactivity, the moving surface model leads to an increase of atomic trapping cross section yielding to an increase of the so-called hot atoms population and a decrease of the direct Eley-Rideal cross section. The energy exchange between the surface and the nitrogen atoms is semi-quantitatively interpreted by a simple binary collision model.
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Cyriac J, Pradeep T, Kang H, Souda R, Cooks RG. Low-Energy Ionic Collisions at Molecular Solids. Chem Rev 2012; 112:5356-411. [DOI: 10.1021/cr200384k] [Citation(s) in RCA: 88] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- Jobin Cyriac
- DST Unit of
Nanoscience, Department
of Chemistry, Indian Institute of Technology Madras, Chennai 600 036, India
- Department of Chemistry, Purdue University, West Lafayette, Indiana 47907, United
States
| | - T. Pradeep
- DST Unit of
Nanoscience, Department
of Chemistry, Indian Institute of Technology Madras, Chennai 600 036, India
| | - H. Kang
- Department of Chemistry, Seoul National University, Gwanak-gu, Seoul 151-747,
Republic of Korea
| | - R. Souda
- International
Center for Materials
Nanoarchitectonics, National Institute for Materials Science, 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
| | - R. G. Cooks
- Department of Chemistry, Purdue University, West Lafayette, Indiana 47907, United
States
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Quintas-Sánchez E, Larrégaray P, Crespos C, Martin-Gondre L, Rubayo-Soneira J, Rayez JC. Dynamical reaction pathways in Eley-Rideal recombination of nitrogen from W(100). J Chem Phys 2012; 137:064709. [DOI: 10.1063/1.4742815] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Affiliation(s)
- Benjamin Kaduk
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA
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Youngs TGA, Hardacre C. Effect of hydrophobic nanopatches within an ionic surface on the structure of liquids. Phys Chem Chem Phys 2011; 13:582-5. [DOI: 10.1039/c0cp01838d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Trevethan T, Shluger A, Kantorovich L. Modelling components of future molecular devices. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2010; 22:084024. [PMID: 21389400 DOI: 10.1088/0953-8984/22/8/084024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
We discuss challenges involved in modelling different components of molecular devices and give several examples that demonstrate how computer modelling evolved over the last few years to become a comprehensive tool for designing molecules, predicting their adsorption and diffusion at surfaces, simulating atomic force microscopy imaging and manipulation of atoms and molecules at insulating surfaces and studying electron conduction in prototype molecular devices. We describe some of the computational techniques used for modelling adsorption, diffusion, imaging and manipulation of organic molecules at surfaces and challenges pertaining to these studies, give several examples of applications and discuss further prospects for theoretical modelling of complex organic molecules at surfaces.
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Affiliation(s)
- Thomas Trevethan
- Department of Physics and Astronomy, University College London, Gower Street, London WC1E 6BT, UK. London Centre for Nanotechnology, University College London, Gower Street, London WC1E 6BT, UK. The Thomas Young Centre for Theory and Simulation of Materials, University College London, Gower Street, London WC1E 6BT, UK. WPI-AIMR, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai 980-8577, Japan
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Cramer CJ, Truhlar DG. Density functional theory for transition metals and transition metal chemistry. Phys Chem Chem Phys 2009; 11:10757-816. [PMID: 19924312 DOI: 10.1039/b907148b] [Citation(s) in RCA: 1063] [Impact Index Per Article: 70.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
We introduce density functional theory and review recent progress in its application to transition metal chemistry. Topics covered include local, meta, hybrid, hybrid meta, and range-separated functionals, band theory, software, validation tests, and applications to spin states, magnetic exchange coupling, spectra, structure, reactivity, and catalysis, including molecules, clusters, nanoparticles, surfaces, and solids.
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Affiliation(s)
- Christopher J Cramer
- Department of Chemistry and Supercomputing Institute, University of Minnesota, Minneapolis, MN 55455-0431, USA.
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Long-range interactions between polar molecules and metallic surfaces: A comparison of classical and density functional theory based models. Chem Phys Lett 2009. [DOI: 10.1016/j.cplett.2009.02.037] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Antony J, Grimme S. Structures and interaction energies of stacked graphene–nucleobase complexes. Phys Chem Chem Phys 2008; 10:2722-9. [DOI: 10.1039/b718788b] [Citation(s) in RCA: 232] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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