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Vo P, Forsman J, Woodward CE. Boundary-Monte Carlo Method for Neutral and Charged Confined Fluids. J Chem Theory Comput 2022; 18:3766-3780. [PMID: 35575645 DOI: 10.1021/acs.jctc.1c01146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
In this work, we describe a new Monte Carlo (MC) simulation method to investigate highly coupled fluids in confined geometries at a constant chemical potential. This method is based on so-called multi-scale Hamiltonian methods, wherein the chemical potential is determined using a more amenable Hamiltonian for a fluid in an "outer" region, which facilitates standard methods, such as grand canonical MC simulations or Widom's particle insertion method. The (inner region) fluid of interest is placed in diffusive contact with the simpler outer fluid via a boundary zone wherein the Hamiltonian is transformed. The current method utilizes an ideal fluid for the outer regions, which allows for implicit rather than explicit simulations. Only the boundary and inner region need explicit consideration; hence, the nomenclature used is boundary-Monte Carlo. We illustrate the utility of the method for simple neutral and charged fluids in cylindrical and planar pores. In the latter case, we use a dense room-temperature ionic liquid model and illustrate how the boundary zone establishes a proper Donnan equilibrium between inner and outer fluids in the presence of charged planar electrodes. Thus, the method allows direct calculation of properties such as the differential capacitance, without the need for additional difficult calculations of the requisite Donnan potential.
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Affiliation(s)
- Phuong Vo
- School of Science, University of New South Wales, Canberra, Canberra ACT 2600, Australia
| | - Jan Forsman
- Department of Theoretical Chemistry, Chemical Centre, Lund University, Lund S-22100, Sweden
| | - Clifford E Woodward
- School of Science, University of New South Wales, Canberra, Canberra ACT 2600, Australia
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2
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Kitaoka H, Hashimoto K, Nishi N, Sakka T. Solid Surface Induced Anisotropic Clustering in Ethanol-Cyclohexane Binary Liquids Studied by Molecular Dynamics Simulations. CHEM LETT 2021. [DOI: 10.1246/cl.210292] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Haru Kitaoka
- Department of Energy and Hydrocarbon Chemistry, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan
| | - Kota Hashimoto
- Department of Energy and Hydrocarbon Chemistry, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan
| | - Naoya Nishi
- Department of Energy and Hydrocarbon Chemistry, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan
| | - Tetsuo Sakka
- Department of Energy and Hydrocarbon Chemistry, Graduate School of Engineering, Kyoto University, Kyoto 615-8510, Japan
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3
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Fomin YD. Between two and three dimensions: Crystal structures in a slit pore. J Colloid Interface Sci 2020; 580:135-145. [PMID: 32683112 DOI: 10.1016/j.jcis.2020.06.046] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2020] [Revised: 06/08/2020] [Accepted: 06/10/2020] [Indexed: 10/23/2022]
Abstract
The structure of a simple monatomic system in a slit pore has been studied by means of the molecular dynamics simulation. Nowadays, it is supposed that the structure of crystals in a narrow pore (narrower than approximately eight atomic diameters) should be described as a set of two-dimensional layers with either triangular, or square symmetry. In addition, a buckled phase can appear with particles located in zigzag way around a plane. It is shown that all these structures can be considered as cuts of FCC or HCP structures.
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Affiliation(s)
- Yu D Fomin
- Vereshchagin Institute of High Pressure Physics, Russian Academy of Sciences, Kaluzhskoe shosse, 14, Troitsk, Moscow 108840 Russia; Moscow Institute of Physics and Technology (National Research University), 9 Institutskiy Lane, Dolgoprudny, Moscow region 141701, Russia.
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4
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Tendong E, Dasgupta TS, Chakrabarti J. Dynamics of water trapped in transition metal oxide-graphene nano-confinement. JOURNAL OF PHYSICS. CONDENSED MATTER : AN INSTITUTE OF PHYSICS JOURNAL 2020; 32:325101. [PMID: 32191936 DOI: 10.1088/1361-648x/ab814f] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Accepted: 03/19/2020] [Indexed: 06/10/2023]
Abstract
Motivated by practical implementation of transition-metal oxide-graphene heterostructures, we use all atom molecular dynamics simulations to study dynamics of water in a nano slit bounded by a transition metal oxide surface, namely, TiO2termination of SrTiO3, and graphene. The resultant asymmetric, strong confinement produces square ice-like crystallites of water pinned at TiO2surface and drives enhanced hydrophobicity of graphene via the proximity effect to the hydrophilic TiO2surface. This importantly brings in dynamic heterogeneity, both in translational and rotational degrees of freedom, due to coupling between the slow relaxing, strongly adsorbed water layer at the hydrophilic oxide surface, and faster relaxation of subsequent water layers. The heterogeneity is signalled in the ruggedness of the effective free energy landscapes. We discuss possible implications of our findings in drug delivery.
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Affiliation(s)
- E Tendong
- Department of Condensed Matter Physics and Material Sciences & Department of Chemical Biological and Macromoleculer Sciences, S N Bose National Centre for Basic Sciences, Block JD, Sector III, Salt Lake, Kolkata - 700106, India
| | - T Saha Dasgupta
- Department of Condensed Matter Physics and Material Sciences & Department of Chemical Biological and Macromoleculer Sciences, S N Bose National Centre for Basic Sciences, Block JD, Sector III, Salt Lake, Kolkata - 700106, India
| | - J Chakrabarti
- Department of Condensed Matter Physics and Material Sciences,Thematic Unit of Excellence for Material Science & Technology Research Centre, S N Bose National Centre for Basic Sciences, Block JD, Sector III, Salt Lake, Kolkata - 700106, India
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5
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Goswami A, Singh JK. A general topological network criterion for exploring the structure of icy nanoribbons and monolayers. Phys Chem Chem Phys 2020; 22:3800-3808. [DOI: 10.1039/c9cp04902a] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We develop intuitive metrics for quantifying complex nucleating systems under confinement.
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Affiliation(s)
- Amrita Goswami
- Department of Chemical Engineering
- Indian Institute of Technology Kanpur
- India
| | - Jayant K. Singh
- Department of Chemical Engineering
- Indian Institute of Technology Kanpur
- India
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6
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Borchardt L, Casco ME, Silvestre-Albero J. Methane Hydrate in Confined Spaces: An Alternative Storage System. Chemphyschem 2018. [DOI: 10.1002/cphc.201701250] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Lars Borchardt
- Department Inorganic Chemistry; TU Dresden; Bergstrasse 66 D-01062 Dresden Germany
| | | | - Joaquin Silvestre-Albero
- Laboratorio de Materiales Avanzados, Departamento de Química Inorgánica-IUMA; Universidad de Alicante; Ctra. San Vicente del Raspeig-Alicante s/n E-03690 San Vicente del Raspeig Spain
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7
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Kaneko T. Elevation/depression mechanism of freezing points of liquid confined in slit nanopores. MOLECULAR SIMULATION 2017. [DOI: 10.1080/08927022.2017.1350785] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Toshihiro Kaneko
- Department of Mechanical Engineering, Tokyo University of Science, Noda, Japan
- Research Institute for Science and Technology (RIST), Tokyo University of Science, Noda, Japan
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8
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Akbarzadeh H, Abbaspour M. Investigation of melting and freezing of Ag–Au alloy nanoclusters supported on carbon nanotube using molecular dynamics simulations. J Mol Liq 2016. [DOI: 10.1016/j.molliq.2016.02.007] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Akbarzadeh H, Abbaspour M, Salemi S. Carbon monoxide adsorption on the single-walled carbon nanotube supported gold–silver nanoalloys. NEW J CHEM 2016. [DOI: 10.1039/c5nj01382h] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The carbon nanotube diameter and chirality have significant influences on CO adsorption.
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Affiliation(s)
- Hamed Akbarzadeh
- Department of Chemistry
- Faculty of Basic Sciences
- Hakim Sabzevari University
- 96179-76487 Sabzevar
- Iran
| | - Mohsen Abbaspour
- Department of Chemistry
- Faculty of Basic Sciences
- Hakim Sabzevari University
- 96179-76487 Sabzevar
- Iran
| | - Sirous Salemi
- Department of Chemistry
- Faculty of Basic Sciences
- Hakim Sabzevari University
- 96179-76487 Sabzevar
- Iran
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Akbarzadeh H, Abbaspour M. Effects of diameter and chirality on structural and dynamical behavior of [EMIM][PF6] encapsulated in carbon nanotube: A molecular dynamics study. J Mol Liq 2015. [DOI: 10.1016/j.molliq.2015.10.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Kaneko T, Bai J, Yasuoka K, Mitsutake A, Zeng XC. Liquid-solid and solid-solid phase transition of monolayer water: high-density rhombic monolayer ice. J Chem Phys 2015; 140:184507. [PMID: 24832288 DOI: 10.1063/1.4874696] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Liquid-solid and solid-solid phase transitions of a monolayer water confined between two parallel hydrophobic surfaces are studied by molecular dynamics simulations. The solid phase considered is the high-density rhombic monolayer ice. Based on the computed free energy surface, it is found that at a certain width of the slit nanopore, the monolayer water exhibits not only a high freezing point but also a low energy barrier to crystallization. Moreover, through analyzing the oxygen-hydrogen-oxygen angle distribution and oxygen-hydrogen radial distribution, the high-density monolayer ice is classified as either a flat ice or a puckered ice. The transition between a flat ice and a puckered ice reflects a trade-off between the water-wall interactions and the electrostatic interactions among water molecules.
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Affiliation(s)
- Toshihiro Kaneko
- Department of Mechanical Engineering, Tokyo University of Science, Noda 278-8510, Japan
| | - Jaeil Bai
- Department of Chemistry, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
| | - Kenji Yasuoka
- Department of Mechanical Engineering, Keio University, Yokohama 223-8522, Japan
| | - Ayori Mitsutake
- Department of Physics, Keio University, Yokohama 223-8522, Japan and JST, PRESTO, Yokohama 223-8522, Japan
| | - Xiao Cheng Zeng
- Department of Chemistry, University of Nebraska-Lincoln, Lincoln, Nebraska 68588, USA
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Phadungbut P, Do D, Nicholson D, Tangsathitkulchai C. On the phase transition of argon adsorption in an open end slit pore—Effects of temperature and pore size. Chem Eng Sci 2015. [DOI: 10.1016/j.ces.2014.12.038] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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13
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Bose A, Metya AK, Singh JK. Surface effect on the electromelting behavior of nanoconfined water. Phys Chem Chem Phys 2015; 17:23147-54. [DOI: 10.1039/c5cp03778f] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
Lateral diffusivity of water under confinement as a function of electric field.
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Affiliation(s)
- Arnab Bose
- Department of Chemical Engineering
- Indian Institute of Technology Kanpur
- Kanpur-208016
- India
| | - Atanu K. Metya
- Department of Chemical Engineering
- Indian Institute of Technology Kanpur
- Kanpur-208016
- India
| | - Jayant K. Singh
- Department of Chemical Engineering
- Indian Institute of Technology Kanpur
- Kanpur-208016
- India
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14
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Abbaspour M, Akbarzadeh H, Abroodi M. A new and accurate expression for the radial distribution function of confined Lennard-Jones fluid in carbon nanotubes. RSC Adv 2015. [DOI: 10.1039/c5ra16151g] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023] Open
Abstract
A new and accurate expression for the RDF of confined LJ fluid into carbon nanotubes has been obtained.
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15
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Das CK, Singh JK. Effect of confinement on the solid-liquid coexistence of Lennard-Jones fluid. J Chem Phys 2014; 139:174706. [PMID: 24206321 DOI: 10.1063/1.4827397] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The solid-liquid coexistence of a Lennard-Jones fluid confined in slit pores of variable pore size, H, is studied using molecular dynamics simulations. Three-stage pseudo-supercritical transformation path of Grochola [J. Chem. Phys. 120(5), 2122 (2004)] and multiple histogram reweighting are employed for the confined system, for various pore sizes ranging from 20 to 5 molecular diameters, to compute the solid-liquid coexistence. The Gibbs free energy difference is evaluated using thermodynamic integration method by connecting solid-liquid phases under confinement via one or more intermediate states without any first order phase transition among them. Thermodynamic melting temperature is found to oscillate with wall separation, which is in agreement with the behavior seen for kinetic melting temperature evaluated in an earlier study. However, thermodynamic melting temperature for almost all wall separations is higher than the bulk case, which is contrary to the behavior seen for the kinetic melting temperature. The oscillation founds to decay at around H = 12, and beyond that pore size dependency of the shift in melting point is well represented by the Gibbs-Thompson equation.
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Affiliation(s)
- Chandan K Das
- Department of Chemical Engineering, Indian Institute of Technology Kanpur, Kanpur 208016, India
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16
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Das CK, Singh JK. Melting transition of Lennard-Jones fluid in cylindrical pores. J Chem Phys 2014; 140:204703. [DOI: 10.1063/1.4876077] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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17
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Ustinov EA. Phase equilibrium in argon films stabilized by homogeneous surfaces and thermodynamics of two-stage melting transition. J Chem Phys 2014; 140:074706. [PMID: 24559359 DOI: 10.1063/1.4865751] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Freezing of gases adsorbed on open surfaces (e.g., graphite) and in narrow pores is a widespread phenomenon which is a subject of a large number of publications. Modeling of the gas/liquid-solid transition is usually accomplished with a molecular simulation technique. However, quantitative analysis of the gas/liquid-solid coexistence and thermodynamic properties of the solid layer still encounters serious difficulties. This is mainly due to the effect of simulation box size on the lattice constant. Since the lattice constant is a function of loading and temperature, once the ordering transition has occurred, the simulation box size must be corrected in the course of simulation according to the Gibbs-Duhem equation. A significant problem is also associated with accurate prediction of the two-dimensional liquid-solid coexistence because of a small difference in densities of coexisting phases. The aim of this study is thermodynamic analysis of the two-dimensional phase coexistence in systems involving crystal-like free of defects layers in narrow slit pores. A special attention was paid to the determination of triple point temperatures. It is shown that intrinsic properties of argon monolayer adsorbed on the graphite surface are similar to those of isolated monolayer accommodated in the slit pore having width of two argon collision diameters. Analysis of the latter system is shown to be clearer and less time-consuming than the former one, which has allowed for explanation of the experimentally observed two-stage melting transition of argon monolayer on graphite without invoking the periodic surface potential modulation and orientational transition.
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Affiliation(s)
- E A Ustinov
- Ioffe Physical Technical Institute, 26 Polytechnicheskaya, St. Petersburg 194021, Russia
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