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Kurouski D, Deckert-Gaudig T, Deckert V, Lednev IK. Structure and composition of insulin fibril surfaces probed by TERS. J Am Chem Soc 2012; 134:13323-9. [PMID: 22813355 DOI: 10.1021/ja303263y] [Citation(s) in RCA: 112] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Abstract
Amyloid fibrils associated with many neurodegenerative diseases are the most intriguing targets of modern structural biology. Significant knowledge has been accumulated about the morphology and fibril-core structure recently. However, no conventional methods could probe the fibril surface despite its significant role in the biological activity. Tip-enhanced Raman spectroscopy (TERS) offers a unique opportunity to characterize the surface structure of an individual fibril due to a high depth and lateral spatial resolution of the method in the nanometer range. Herein, TERS is utilized for characterizing the secondary structure and amino acid residue composition of the surface of insulin fibrils. It was found that the surface is strongly heterogeneous and consists of clusters with various protein conformations. More than 30% of the fibril surface is dominated by β-sheet secondary structure, further developing Dobson's model of amyloid fibrils (Jimenez et al. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 9196-9201). The propensity of various amino acids to be on the fibril surface and specific surface secondary structure elements were evaluated. β-sheet areas are rich in cysteine and aromatic amino acids, such as phenylalanine and tyrosine, whereas proline was found only in α-helical and unordered protein clusters. In addition, we showed that carboxyl, amino, and imino groups are nearly equally distributed over β-sheet and α-helix/unordered regions. Overall, this study provides valuable new information about the structure and composition of the insulin fibril surface and demonstrates the power of TERS for fibril characterization.
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Affiliation(s)
- Dmitry Kurouski
- University at Albany, State University of New York, 1400 Washington Avenue, Albany, New York 12222, USA
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Cialla D, März A, Böhme R, Theil F, Weber K, Schmitt M, Popp J. Surface-enhanced Raman spectroscopy (SERS): progress and trends. Anal Bioanal Chem 2011; 403:27-54. [PMID: 22205182 DOI: 10.1007/s00216-011-5631-x] [Citation(s) in RCA: 410] [Impact Index Per Article: 31.5] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2011] [Revised: 11/10/2011] [Accepted: 12/01/2011] [Indexed: 12/12/2022]
Abstract
Surface-enhanced Raman spectroscopy (SERS) combines molecular fingerprint specificity with potential single-molecule sensitivity. Therefore, the SERS technique is an attractive tool for sensing molecules in trace amounts within the field of chemical and biochemical analytics. Since SERS is an ongoing topic, which can be illustrated by the increased annual number of publications within the last few years, this review reflects the progress and trends in SERS research in approximately the last three years. The main reason why the SERS technique has not been established as a routine analytic technique, despite its high specificity and sensitivity, is due to the low reproducibility of the SERS signal. Thus, this review is dominated by the discussion of the various concepts for generating powerful, reproducible, SERS-active surfaces. Furthermore, the limit of sensitivity in SERS is introduced in the context of single-molecule spectroscopy and the calculation of the 'real' enhancement factor. In order to shed more light onto the underlying molecular processes of SERS, the theoretical description of SERS spectra is also a growing research field and will be summarized here. In addition, the recording of SERS spectra is affected by a number of parameters, such as laser power, integration time, and analyte concentration. To benefit from synergies, SERS is combined with other methods, such as scanning probe microscopy and microfluidics, which illustrates the broad applications of this powerful technique.
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Affiliation(s)
- Dana Cialla
- Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University Jena, Jena, Germany
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März A, Henkel T, Cialla D, Schmitt M, Popp J. Droplet formation via flow-through microdevices in Raman and surface enhanced Raman spectroscopy--concepts and applications. LAB ON A CHIP 2011; 11:3584-3592. [PMID: 21964776 DOI: 10.1039/c1lc20638a] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
This review outlines concepts and applications of droplet formation via flow-through microdevices in Raman and surface enhanced Raman spectroscopy (SERS) as well as the advantages of the approach. Even though the droplet-based flow-through technique is utilized in various fields, the review focuses on implementing droplet-based fluidic systems in Raman and SERS as these highly specific detection methods are of major interest in the field of analytics. With the combination of Raman or SERS with droplet-based fluidics, it is expected to achieve novel opportunities for analytics. Besides the approach of using droplet-based microfluidic devices as a detection platform, the unique properties of flow-through systems for the formation of droplets are capitalized to produce SERS active substrates and to accomplish uniform sample preparation. Within this contribution, previous reported applications on droplet-based flow-through Raman and SERS approaches and the additional benefit with regard to the importance in the field of analytics are considered.
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Affiliation(s)
- Anne März
- Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich-Schiller University Jena, Helmholtzweg 4, 07743 Jena, Germany
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Cialla D, Weber K, Böhme R, Hübner U, Schneidewind H, Zeisberger M, Mattheis R, Möller R, Popp J. Towards multiple readout application of plasmonic arrays. BEILSTEIN JOURNAL OF NANOTECHNOLOGY 2011; 2:501-508. [PMID: 22003456 PMCID: PMC3190620 DOI: 10.3762/bjnano.2.54] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2011] [Accepted: 08/12/2011] [Indexed: 05/05/2023]
Abstract
In order to combine the advantages of fluorescence and surface-enhanced Raman spectroscopy (SERS) on the same chip platform, a nanostructured gold surface with a unique design, allowing both the sensitive detection of fluorescence light together with the specific Raman fingerprint of the fluorescent molecules, was established. This task requires the fabrication of plasmonic arrays that permit the binding of molecules of interest at different distances from the metallic surface. The most efficient SERS enhancement is achieved for molecules directly adsorbed on the metallic surface due to the strong field enhancement, but where, however, the fluorescence is quenched most efficiently. Furthermore, the fluorescence can be enhanced efficiently by careful adjustment of the optical behavior of the plasmonic arrays. In this article, the simultaneous application of SERS and fluorescence, through the use of various gold nanostructured arrays, is demonstrated by the realization of a DNA detection scheme. The results shown open the way to more flexible use of plasmonic arrays in bioanalytics.
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Affiliation(s)
- Dana Cialla
- Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich-Schiller-University Jena, Helmholtzweg 4, 07743 Jena, Germany
| | - Karina Weber
- Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich-Schiller-University Jena, Helmholtzweg 4, 07743 Jena, Germany
| | - René Böhme
- Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich-Schiller-University Jena, Helmholtzweg 4, 07743 Jena, Germany
| | - Uwe Hübner
- Institute of Photonic Technology, Albert-Einstein-Straße 9, 07745 Jena, Germany
| | - Henrik Schneidewind
- Institute of Photonic Technology, Albert-Einstein-Straße 9, 07745 Jena, Germany
| | - Matthias Zeisberger
- Institute of Photonic Technology, Albert-Einstein-Straße 9, 07745 Jena, Germany
| | - Roland Mattheis
- Institute of Photonic Technology, Albert-Einstein-Straße 9, 07745 Jena, Germany
| | - Robert Möller
- Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich-Schiller-University Jena, Helmholtzweg 4, 07743 Jena, Germany
| | - Jürgen Popp
- Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich-Schiller-University Jena, Helmholtzweg 4, 07743 Jena, Germany
- Institute of Photonic Technology, Albert-Einstein-Straße 9, 07745 Jena, Germany
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Cialla D, Petschulat J, Hübner U, Schneidewind H, Zeisberger M, Mattheis R, Pertsch T, Schmitt M, Möller R, Popp J. Investigation on the second part of the electromagnetic SERS enhancement and resulting fabrication strategies of anisotropic plasmonic arrays. Chemphyschem 2010; 11:1918-24. [PMID: 20401896 DOI: 10.1002/cphc.200901009] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
In general, the electromagnetic mechanism is understood as the strongest contribution to the overall surface-enhanced Raman spectroscopy (SERS) enhancement. Due to the excitation of surface plasmons, a strong electromagnetic field is induced at the interfaces of a metallic nanoparticle leading to a drastic enhancement of the Raman scattering cross-section. Furthermore, the Raman scattered light expierences an emission enhancement due to the plasmon resonances of the nanoantennas. Herein, this second part of the electromagnetic enhancement phenomenon is investigated for different Raman bands of crystal violet by utilizing the anisotropic plasmonic character of gold nanorhomb SERS arrays. We aim at evaluating the effects of localized and propagating surface plasmon polariton modes as well as their combination on the scattered SERS intensity. From that point of view, design and fabrication strategies towards the fabrication of SERS arrays for excitation wavelengths in the visible and near-infrared (NIR) spectral region can be given, also using a double-resonant electromagnetic enhancement.
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Affiliation(s)
- Dana Cialla
- Institute of Physical Chemistry, Friedrich-Schiller-University Jena, Helmholtzweg 4, 07743 Jena, Germany
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Vogler N, Bocklitz T, Mariani M, Deckert V, Markova A, Schelkens P, Rösch P, Akimov D, Dietzek B, Popp J. Separation of CARS image contributions with a Gaussian mixture model. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2010; 27:1361-1371. [PMID: 20508705 DOI: 10.1364/josaa.27.001361] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
Coherent anti-Stokes Raman scattering (CARS) gained a lot of importance in chemical imaging. This is due to the fast image acquisition time, the high spatial resolution, the non-invasiveness, and the molecular sensitivity of this method. By using the single-line CARS in contrast to the multiplex CARS, different signal contributions stemming from resonant and non-resonant light-matter interactions are indistinguishable. Here a numerical method is presented in order to extract more information from univariate CARS images: vibrational composition, morphological information, and contributions from index-of-refraction steps can be separated from single-line CARS images. The image processing algorithm is based on the physical properties of CARS process as reflected in the shape of the intensity histogram of univariate CARS images. Because of this the comparability of individual CARS images recorded with different experimental parameters is achieved. The latter is important for a quantitative evaluation of CARS images.
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Affiliation(s)
- Nadine Vogler
- Institute of Photonic Technology Jena, Albert-Einstein-Strasse 9, D-07745 Jena, Germany
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Petschulat J, Cialla D, Janunts N, Rockstuhl C, Hübner U, Möller R, Schneidewind H, Mattheis R, Popp J, Tünnermann A, Lederer F, Pertsch T. Doubly resonant optical nanoantenna arrays for polarization resolved measurements of surface-enhanced Raman scattering. OPTICS EXPRESS 2010; 18:4184-97. [PMID: 20389431 DOI: 10.1364/oe.18.004184] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
We report that rhomb-shaped metal nanoantenna arrays support multiple plasmonic resonances, making them favorable bio-sensing substrates. Besides the two localized plasmonic dipole modes associated with the two principle axes of the rhombi, the sample supports an additional grating-induced surface plasmon polariton resonance. The plasmonic properties of all modes are carefully studied by far-field measurements together with numerical and analytical calculations. The sample is then applied to surface-enhanced Raman scattering measurements. It is shown to be highly efficient since two plasmonic resonances of the structure were simultaneously tuned to coincide with the excitation and the emission wavelength in the SERS experiment. The analysis is completed by measuring the impact of the polarization angle on the SERS signal.
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Affiliation(s)
- J Petschulat
- Institute of Applied Physics, Nanooptics, Friedrich-Schiller-Universität Jena, Max Wien Platz 1, 07743 Jena, Germany.
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