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Zohouri D, Taverna M, Morani M, Obeid S, Mougin J, Krupova Z, Defrenaix P, Mai TD. Investigation of on-line electrokinetic enrichment strategies for capillary electrophoresis of extracellular vesicles. J Chromatogr A 2024; 1730:465116. [PMID: 38936163 DOI: 10.1016/j.chroma.2024.465116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2024] [Revised: 06/19/2024] [Accepted: 06/22/2024] [Indexed: 06/29/2024]
Abstract
This work explores strategies for electrokinetic preconcentration of extracellular vesicles (EVs) that are potential source of biomarkers for different diseases. The first approach that led to successful preconcentration of EVs is based on large volume sample stacking (LVSS), allowing an enrichment factor of 7 for CE of EVs with long-end injection (using a capillary with an effective length of 50 cm). Attempts were also made to perform multiple cycles of LVSS, field amplified sample stacking (FASS) and field amplified sample injection (FASI), to improve EVs preconcentration performance. The focus was then put on development of capillary isotachophoresis under high ionic strengths (IS) for electrokinetic enrichment of slow migrating EVs having heterogeneous mobilities. This approach relies on the use of extremely high concentrations of the terminating electrolyte (TE) to slow down the mobility of TE co-ions, rendering them slower than those of EVs. The limit of detection for intact EVs using the developed ITP-UV method reached 8.3 × 108 EVs/mL, allowing an enrichment of 25 folds and a linear calibration up to 4 × 1010 EVs/mL. The ITP-UV and ITP-LIF approaches were applied to provide the electrokinetic signature of EVs of bovine milk and human plasma as well as to visualize more specifically intravesicular fluorescently labelled EVs. The investigation of these strategies shredded light into the challenges still encountered with electrokinetic preconcentration and separation of heterogeneous EVs sub-populations which are discussed herein based on our results and other attempts reported in the literature.
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Affiliation(s)
- Delaram Zohouri
- Université Paris-Saclay, CNRS, Institut Galien Paris-Saclay 91400, Orsay, France
| | - Myriam Taverna
- Université Paris-Saclay, CNRS, Institut Galien Paris-Saclay 91400, Orsay, France
| | - Marco Morani
- Université Paris-Saclay, CNRS, Institut Galien Paris-Saclay 91400, Orsay, France
| | - Sameh Obeid
- Université Paris-Saclay, CNRS, Institut Galien Paris-Saclay 91400, Orsay, France
| | - Julie Mougin
- Université Paris-Saclay, CNRS, Institut Galien Paris-Saclay 91400, Orsay, France
| | - Zuzana Krupova
- Excilone - 6, Rue Blaise Pascal - Parc Euclide 78990, Elancourt, France
| | - Pierre Defrenaix
- Excilone - 6, Rue Blaise Pascal - Parc Euclide 78990, Elancourt, France
| | - Thanh Duc Mai
- Université Paris-Saclay, CNRS, Institut Galien Paris-Saclay 91400, Orsay, France.
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2
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Kumarajith TM, Powell SM, Breadmore MC. Isotachophoretic quantification of total viable bacteria on meat and surfaces. Anal Chim Acta 2024; 1296:342253. [PMID: 38401922 DOI: 10.1016/j.aca.2024.342253] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Revised: 12/18/2023] [Accepted: 01/13/2024] [Indexed: 02/26/2024]
Abstract
BACKGROUND The quantification of microbes, particularly live bacteria, is of utmost importance in assessing the quality of meat products. In the context of meat processing facilities, prompt identification and removal of contaminated carcasses or surfaces is crucial to ensuring the continuous production of safe meat for human consumption. The plate count method and other traditional detection methods are not only labour-intensive but also time-consuming taking 24-48 h. RESULTS In this report, we present a novel isotachophoretic quantification method utilizing two nucleic acid stains, SYTO9 and propionic iodide, for the detection of total viable bacteria. The study employed E. coli M23 bacteria as a model organism, with an analysis time of only 30 min. The method demonstrated a limit of detection (LOD) of 184 CFU mL-1 and 14 cells mL-1 for total viable count and total cell count, respectively. Furthermore, this new approach is capable of detecting the microbial quality standard limits for food contacting surfaces (10 CFU cm-2) and meat (1.99 × 104 CFU cm-2) by swabbing an area of 10 × 10 cm2. SIGNIFICANCE In contrast to the culture-based methods usually employed in food processing facilities, this isotachophoretic technique enables easy and rapid detection (<30 min) of microorganisms, facilitating crucial decision-making essential for maintaining product quality and safety.
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Affiliation(s)
- Thisara M Kumarajith
- Australia Centre for Research on Separation Science, Chemistry, School of Natural Sciences, Tasmania, Australia; Tasmanian Institute of Agriculture, Tasmania, Australia
| | | | - Michael C Breadmore
- Australia Centre for Research on Separation Science, Chemistry, School of Natural Sciences, Tasmania, Australia.
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3
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Kumarajith TM, Breadmore M, Powell SM. Performance evaluation of commercially available swabs for environmental monitoring: Uptake and release efficiency. J Microbiol Methods 2024; 216:106866. [PMID: 38040293 DOI: 10.1016/j.mimet.2023.106866] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2023] [Revised: 11/21/2023] [Accepted: 11/25/2023] [Indexed: 12/03/2023]
Abstract
Safety and the quality of products rely on proper cleanliness procedures and good manufacturing practices in the production environment. The use of swabs for the collection of samples from surfaces has been a common practice in industries, medicine and forensic studies. To accommodate these different purposes, many varieties of swabs have been introduced into the market, and it is important to assess the performance of these swabs before incorporating into an environmental monitoring procedure. The overall effectiveness of a swab is determined by two factors: the number of bacteria that a swab can uptake from a surface and the number of picked-up bacteria the swab can elute into a releasing buffer. This study evaluated the uptake efficiency and release efficiency of four different commercially available swabs: CleanFoam (Texwipes, USA), FLOQSwabs (Copan diagnostic Inc., USA), Hydraflock swabs (Puritan medical products, USA), and Cotton swabs. Cotton swabs showed the highest uptake efficiency (96.5 ± 1.9%), whereas CleanFoam swabs (57.9 ± 20.3%) showed the least. Both flocked (FLOQSwabs and Hydraflock) swabs showed over 80% uptake efficiency. Releasing efficiency of swabs was tested with eight different releasing buffers. Cotton swabs displayed the lowest release efficiency with most of the tested releasing buffers. When employed with Tris HEPES, Tris MOPS, Tris TAPS, FLOQSwabs, and Hydraflock swabs exhibited releasing efficiency of over 75%. The overall efficiency of the swabs was determined using TAPS as the releasing buffer and the values obtained were 80.4 ± 9.8%, 54.7 ± 16.9%, 35.0 ± 12.7% and 25.2 ± 6.9% for Hydraflock swabs, FLOQSwabs, Cotton swabs and Cleanfoam swabs, respectively.
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Affiliation(s)
- Thisara M Kumarajith
- Australia Centre for Research on Separation Science, School of Natural Sciences, University of Tasmania, Australia
| | - Michael Breadmore
- Australia Centre for Research on Separation Science, School of Natural Sciences, University of Tasmania, Australia
| | - Shane M Powell
- Tasmanian Institute of Agriculture, University of Tasmania, Australia.
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4
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Abstract
Isotachophoresis (ITP) is a versatile electrophoretic technique that can be used for sample preconcentration, separation, purification, and mixing, and to control and accelerate chemical reactions. Although the basic technique is nearly a century old and widely used, there is a persistent need for an easily approachable, succinct, and rigorous review of ITP theory and analysis. This is important because the interest and adoption of the technique has grown over the last two decades, especially with its implementation in microfluidics and integration with on-chip chemical and biochemical assays. We here provide a review of ITP theory starting from physicochemical first-principles, including conservation of species, conservation of current, approximation of charge neutrality, pH equilibrium of weak electrolytes, and so-called regulating functions that govern transport dynamics, with a strong emphasis on steady and unsteady transport. We combine these generally applicable (to all types of ITP) theoretical discussions with applications of ITP in the field of microfluidic systems, particularly on-chip biochemical analyses. Our discussion includes principles that govern the ITP focusing of weak and strong electrolytes; ITP dynamics in peak and plateau modes; a review of simulation tools, experimental tools, and detection methods; applications of ITP for on-chip separations and trace analyte manipulation; and design considerations and challenges for microfluidic ITP systems. We conclude with remarks on possible future research directions. The intent of this review is to help make ITP analysis and design principles more accessible to the scientific and engineering communities and to provide a rigorous basis for the increased adoption of ITP in microfluidics.
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Affiliation(s)
- Ashwin Ramachandran
- Department of Aeronautics and Astronautics, Stanford University, Stanford, California 94305, United States
| | - Juan G Santiago
- Department of Mechanical Engineering, Stanford University, Stanford, California 94305, United States
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5
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Breadmore MC, Grochocki W, Kalsoom U, Alves MN, Phung SC, Rokh MT, Cabot JM, Ghiasvand A, Li F, Shallan AI, Keyon ASA, Alhusban AA, See HH, Wuethrich A, Dawod M, Quirino JP. Recent advances in enhancing the sensitivity of electrophoresis and electrochromatography in capillaries and microchips (2016-2018). Electrophoresis 2018; 40:17-39. [PMID: 30362581 DOI: 10.1002/elps.201800384] [Citation(s) in RCA: 96] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2018] [Revised: 10/15/2018] [Accepted: 10/16/2018] [Indexed: 12/22/2022]
Abstract
One of the most cited limitations of capillary and microchip electrophoresis is the poor sensitivity. This review continues to update this series of biannual reviews, first published in Electrophoresis in 2007, on developments in the field of online/in-line concentration methods in capillaries and microchips, covering the period July 2016-June 2018. It includes developments in the field of stacking, covering all methods from field-amplified sample stacking and large-volume sample stacking, through to isotachophoresis, dynamic pH junction, and sweeping. Attention is also given to online or in-line extraction methods that have been used for electrophoresis.
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Affiliation(s)
- Michael C Breadmore
- Australian Centre for Research on Separation Science, Chemistry, School of Natural Science, University of Tasmania, Hobart, Tasmania, Australia
| | - Wojciech Grochocki
- Australian Centre for Research on Separation Science, Chemistry, School of Natural Science, University of Tasmania, Hobart, Tasmania, Australia.,Department of Biopharmaceutics and Pharmacodynamics, Medical University of Gdansk, Gdansk, Poland
| | - Umme Kalsoom
- Australian Centre for Research on Separation Science, Chemistry, School of Natural Science, University of Tasmania, Hobart, Tasmania, Australia.,ARC Centre of Excellence for Electromaterials Science (ACES), School of Natural Sciences, College of Science and Technology, University of Tasmania, Hobart, Australia
| | - Mónica N Alves
- Australian Centre for Research on Separation Science, Chemistry, School of Natural Science, University of Tasmania, Hobart, Tasmania, Australia
| | - Sui Ching Phung
- Australian Centre for Research on Separation Science, Chemistry, School of Natural Science, University of Tasmania, Hobart, Tasmania, Australia
| | | | - Joan M Cabot
- Australian Centre for Research on Separation Science, Chemistry, School of Natural Science, University of Tasmania, Hobart, Tasmania, Australia.,ARC Centre of Excellence for Electromaterials Science (ACES), School of Natural Sciences, College of Science and Technology, University of Tasmania, Hobart, Australia
| | - Alireza Ghiasvand
- Australian Centre for Research on Separation Science, Chemistry, School of Natural Science, University of Tasmania, Hobart, Tasmania, Australia.,Department of Chemistry, Lorestan University, Khoramabad, Iran
| | - Feng Li
- Australian Centre for Research on Separation Science, Chemistry, School of Natural Science, University of Tasmania, Hobart, Tasmania, Australia
| | - Aliaa I Shallan
- Future Industries Institute (FII), University of South Australia, Mawson Lakes, Australia.,Department of Pharmaceutical Analytical Chemistry, Faculty of Pharmacy, Helwan University, Cairo, Egypt
| | - Aemi S Abdul Keyon
- Department of Chemistry, Faculty of Science, Universiti Teknologi Malaysia, Johor Bahru, Johor, Malaysia.,Centre for Sustainable Nanomaterials, Ibnu Sina Institute for Scientific and Industrial Research, Universiti Teknologi Malaysia, Johor Bahru, Johor, Malaysia
| | - Ala A Alhusban
- Department of Pharmacy, Faculty of Pharmacy, Al-Zaytoonah University of Jordan, Amman, Jordan
| | - Hong Heng See
- Department of Chemistry, Faculty of Science, Universiti Teknologi Malaysia, Johor Bahru, Johor, Malaysia.,Centre for Sustainable Nanomaterials, Ibnu Sina Institute for Scientific and Industrial Research, Universiti Teknologi Malaysia, Johor Bahru, Johor, Malaysia
| | - Alain Wuethrich
- Centre for Personalized Nanomedicine, Australian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queensland, Brisbane, QLD, Australia
| | - Mohamed Dawod
- Department of Chemistry, University of Michigan, Ann Arbor, MI, USA
| | - Joselito P Quirino
- Australian Centre for Research on Separation Science, Chemistry, School of Natural Science, University of Tasmania, Hobart, Tasmania, Australia
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Alves MN, Nesterenko PN, Paull B, Haddad PR, Macka M. Separation of superparamagnetic magnetite nanoparticles by capillary zone electrophoresis using non-complexing and complexing electrolyte anions and tetramethylammonium as dispersing additive. Electrophoresis 2018; 39:1429-1436. [DOI: 10.1002/elps.201800095] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2018] [Revised: 03/14/2018] [Accepted: 03/14/2018] [Indexed: 11/09/2022]
Affiliation(s)
- Monica N. Alves
- School of Natural Sciences and Australian Centre for Research on Separation Science (ACROSS); University of Tasmania; Hobart Australia
| | - Pavel N. Nesterenko
- School of Natural Sciences and Australian Centre for Research on Separation Science (ACROSS); University of Tasmania; Hobart Australia
| | - Brett Paull
- School of Natural Sciences and Australian Centre for Research on Separation Science (ACROSS); University of Tasmania; Hobart Australia
| | - Paul R. Haddad
- School of Natural Sciences and Australian Centre for Research on Separation Science (ACROSS); University of Tasmania; Hobart Australia
| | - Mirek Macka
- School of Natural Sciences and Australian Centre for Research on Separation Science (ACROSS); University of Tasmania; Hobart Australia
- Department of Chemistry and Biochemistry; Mendel University; Brno Czech Republic
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7
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Horká M, Karásek P, Roth M, Růžička F. Pre-concentration and separation of bacteria by volume coupling electrophoresis on supercritical water-etched fused silica capillary with two segments of different internal diameters and inner surface roughnesses. Anal Bioanal Chem 2017; 410:167-175. [DOI: 10.1007/s00216-017-0706-y] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2017] [Revised: 10/10/2017] [Accepted: 10/11/2017] [Indexed: 12/21/2022]
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8
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Phung SC, Cabot JM, Macka M, Powell SM, Guijt RM, Breadmore M. Isotachophoretic Fluorescence in Situ Hybridization of Intact Bacterial Cells. Anal Chem 2017; 89:6513-6520. [DOI: 10.1021/acs.analchem.7b00598] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
| | | | | | | | - Rosanne M. Guijt
- Microfluidic Chipshop,
GmbH, Stockholmer Strasse, Jena 07747, Germany
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9
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Breadmore MC, Wuethrich A, Li F, Phung SC, Kalsoom U, Cabot JM, Tehranirokh M, Shallan AI, Abdul Keyon AS, See HH, Dawod M, Quirino JP. Recent advances in enhancing the sensitivity of electrophoresis and electrochromatography in capillaries and microchips (2014–2016). Electrophoresis 2016; 38:33-59. [DOI: 10.1002/elps.201600331] [Citation(s) in RCA: 79] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2016] [Revised: 08/09/2016] [Accepted: 08/10/2016] [Indexed: 01/02/2023]
Affiliation(s)
- Michael C. Breadmore
- Australian Centre of Research on Separation Science, School of Physical Science University of Tasmania Hobart Tasmania Australia
- ARC Centre of Excellence for Electromaterials Science, School of Physical Science University of Tasmania Hobart Tasmania Australia
- ASTech, ARC Training Centre for Portable Analytical Separation Technologies, School of Physical Science University of Tasmania Hobart Tasmania Australia
| | - Alain Wuethrich
- Australian Centre of Research on Separation Science, School of Physical Science University of Tasmania Hobart Tasmania Australia
| | - Feng Li
- Australian Centre of Research on Separation Science, School of Physical Science University of Tasmania Hobart Tasmania Australia
| | - Sui Ching Phung
- Australian Centre of Research on Separation Science, School of Physical Science University of Tasmania Hobart Tasmania Australia
| | - Umme Kalsoom
- Australian Centre of Research on Separation Science, School of Physical Science University of Tasmania Hobart Tasmania Australia
| | - Joan M. Cabot
- Australian Centre of Research on Separation Science, School of Physical Science University of Tasmania Hobart Tasmania Australia
- ARC Centre of Excellence for Electromaterials Science, School of Physical Science University of Tasmania Hobart Tasmania Australia
| | - Masoomeh Tehranirokh
- ASTech, ARC Training Centre for Portable Analytical Separation Technologies, School of Physical Science University of Tasmania Hobart Tasmania Australia
| | - Aliaa I. Shallan
- Department of Analytical Chemistry, Faculty of Pharmacy Helwan University Cairo Egypt
| | - Aemi S. Abdul Keyon
- Department of Chemistry, Faculty of Science Universiti Teknologi Malaysia Johor Bahru Johor Malaysia
| | - Hong Heng See
- Department of Chemistry, Faculty of Science Universiti Teknologi Malaysia Johor Bahru Johor Malaysia
- Centre for Sustainable Nanomaterials, Ibnu Sina Institute for Scientific and industrial Research Universiti Teknologi Malaysia Johor Bahru Johor Malaysia
| | - Mohamed Dawod
- Department of Chemistry University of Michigan Ann Arbor MI USA
| | - Joselito P. Quirino
- Australian Centre of Research on Separation Science, School of Physical Science University of Tasmania Hobart Tasmania Australia
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10
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Malá Z, Gebauer P, Boček P. Analytical capillary isotachophoresis after 50 years of development: Recent progress 2014-2016. Electrophoresis 2016; 38:9-19. [DOI: 10.1002/elps.201600289] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2016] [Revised: 07/15/2016] [Accepted: 07/15/2016] [Indexed: 12/13/2022]
Affiliation(s)
- Zdena Malá
- Institute of Analytical Chemistry of the Czech Academy of Sciences; v.v.i; Brno Czech Republic
| | - Petr Gebauer
- Institute of Analytical Chemistry of the Czech Academy of Sciences; v.v.i; Brno Czech Republic
| | - Petr Boček
- Institute of Analytical Chemistry of the Czech Academy of Sciences; v.v.i; Brno Czech Republic
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