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For: Akhter M, Dutta Majumdar R, Fortier-McGill B, Soong R, Liaghati-Mobarhan Y, Simpson M, Arhonditsis G, Schmidt S, Heumann H, Simpson AJ. Identification of aquatically available carbon from algae through solution-state NMR of whole 13C-labelled cells. Anal Bioanal Chem 2016;408:4357-70. [DOI: 10.1007/s00216-016-9534-8] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2016] [Revised: 03/24/2016] [Accepted: 03/30/2016] [Indexed: 11/28/2022]
Number Cited by Other Article(s)
1
Farjallah A, Fillion M, Guéguen C. Metabolic responses of Euglena gracilis under photoheterotrophic and heterotrophic conditions. Protist 2024;175:126035. [PMID: 38688055 DOI: 10.1016/j.protis.2024.126035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2023] [Revised: 03/19/2024] [Accepted: 04/15/2024] [Indexed: 05/02/2024]
2
Wolff WW, Pellizzari J, Soong R, Lysak DH, Steiner K, Ronda K, Costa P, Downey K, Moxley-Paquette V, Suszczynski C, Boehmer S, Prat JR, Simpson AJ. 13 C-depleted algae as food: Permitting background free in-vivo nuclear magnetic resonance of Daphnia magna at natural abundance. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2024;62:11-18. [PMID: 37984890 DOI: 10.1002/mrc.5409] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Revised: 10/20/2023] [Accepted: 10/23/2023] [Indexed: 11/22/2023]
3
Lysak DH, Bermel W, Moxley-Paquette V, Michal C, Ghosh-Biswas R, Soong R, Nashman B, Lacerda A, Simpson AJ. Cutting without a Knife: A Slice-Selective 2D 1H-13C HSQC NMR Sequence for the Analysis of Inhomogeneous Samples. Anal Chem 2023;95:14392-14401. [PMID: 37713676 DOI: 10.1021/acs.analchem.3c02756] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/17/2023]
4
Moxley-Paquette V, Lane D, Steiner K, Downey K, Costa PM, Lysak DH, Ronda K, Soong R, Zverev D, De Castro P, Frei T, Stuessi J, Al Adwan-Stojilkovic D, Graf S, Gloor S, Schmidig D, Kuemmerle R, Kuehn T, Busse F, Utz M, Lacerda A, Nashman B, Albert L, Anders J, Simpson AJ. Development of Low-Magnetic Susceptibility Microcoils via 5-Axis Machining for Analysis of Biological and Environmental Samples. Anal Chem 2023;95:13932-13940. [PMID: 37676066 DOI: 10.1021/acs.analchem.3c02437] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/08/2023]
5
Downey K, Michal CA, Bermel W, Jenne A, Soong R, Decker V, Busse F, Goerling B, Heumann H, Boenisch H, Gundy M, Simpson A. Targeted Compound Selection with Increased Sensitivity in 13C-Enriched Biological and Environmental Samples Using 13C-DREAMTIME in Both High-Field and Low-Field NMR. Anal Chem 2023;95:6709-6717. [PMID: 37037008 DOI: 10.1021/acs.analchem.3c00445] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/12/2023]
6
Valério Filho A, Santana LR, Motta NG, Passos LF, Wolke SL, Mansilla A, Astorga-España MS, Becker EM, de Pereira CMP, Carreno NLV. Extraction of fatty acids and cellulose from the biomass of algae Durvillaea antarctica and Ulva lactuca: An alternative for biorefineries. ALGAL RES 2023. [DOI: 10.1016/j.algal.2023.103084] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/08/2023]
7
Theillet FX, Luchinat E. In-cell NMR: Why and how? PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2022;132-133:1-112. [PMID: 36496255 DOI: 10.1016/j.pnmrs.2022.04.002] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Revised: 04/19/2022] [Accepted: 04/27/2022] [Indexed: 06/17/2023]
8
Nami F, Ferraz MJ, Bakkum T, Aerts JMFG, Pandit A. Real-Time NMR Recording of Fermentation and Lipid Metabolism Processes in Live Microalgae Cells. Angew Chem Int Ed Engl 2022;61:e202117521. [PMID: 35103372 PMCID: PMC9305762 DOI: 10.1002/anie.202117521] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2022] [Indexed: 11/10/2022]
9
Jung H, Yoon WB, Matsukawa S. Effect of moisture uptake on the texture of dried laver Porphyra. (Nori) studied by mechanical characterization and NMR measurements. Food Hydrocoll 2022. [DOI: 10.1016/j.foodhyd.2021.107223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
10
Moxley-Paquette V, Wu B, Lane D, Bastawrous M, Ning P, Soong R, De Castro P, Kovacevic I, Frei T, Stuessi J, Al Adwan-Stojilkovic D, Graf S, Vincent F, Schmidig D, Kuehn T, Kuemmerle R, Beck A, Fey M, Bermel W, Busse F, Gundy M, Boenisch H, Heumann H, Nashman B, Dutta Majumdar R, Lacerda A, Simpson AJ. Evaluation of double-tuned single-sided planar microcoils for the analysis of small 13 C enriched biological samples using 1 H-13 C 2D heteronuclear correlation NMR spectroscopy. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2022;60:386-397. [PMID: 34647646 DOI: 10.1002/mrc.5227] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2021] [Revised: 10/06/2021] [Accepted: 10/07/2021] [Indexed: 06/13/2023]
11
Nami F, Ferraz MJ, Bakkum T, Aerts JMFG, Pandit A. Real‐Time NMR Recording of Fermentation and Lipid Metabolism Processes in Live Microalgae Cells. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202117521] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
12
Ghassemi N, Poulhazan A, Deligey F, Mentink-Vigier F, Marcotte I, Wang T. Solid-State NMR Investigations of Extracellular Matrixes and Cell Walls of Algae, Bacteria, Fungi, and Plants. Chem Rev 2021;122:10036-10086. [PMID: 34878762 DOI: 10.1021/acs.chemrev.1c00669] [Citation(s) in RCA: 63] [Impact Index Per Article: 21.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
13
Poulhazan A, Dickwella Widanage MC, Muszyński A, Arnold AA, Warschawski DE, Azadi P, Marcotte I, Wang T. Identification and Quantification of Glycans in Whole Cells: Architecture of Microalgal Polysaccharides Described by Solid-State Nuclear Magnetic Resonance. J Am Chem Soc 2021;143:19374-19388. [PMID: 34735142 PMCID: PMC8630702 DOI: 10.1021/jacs.1c07429] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Indexed: 12/15/2022]
14
Inverse or direct detect experiments and probes: Which are “best” for in-vivo NMR research of 13C enriched organisms? Anal Chim Acta 2020;1138:168-180. [DOI: 10.1016/j.aca.2020.09.065] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Revised: 09/11/2020] [Accepted: 09/30/2020] [Indexed: 01/09/2023]
15
Liaghati Mobarhan Y, Soong R, Lane D, Simpson AJ. In vivo comprehensive multiphase NMR. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2020;58:427-444. [PMID: 32239574 DOI: 10.1002/mrc.4832] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2018] [Revised: 12/20/2018] [Accepted: 01/03/2019] [Indexed: 06/11/2023]
16
Iglesias MJ, Soengas R, Martins CB, Correia MJ, Ferreira JD, Santos LMA, Ortiz FL. Chemotaxonomic Profiling Through NMR1. JOURNAL OF PHYCOLOGY 2020;56:521-539. [PMID: 31876290 DOI: 10.1111/jpy.12959] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2019] [Accepted: 12/11/2019] [Indexed: 06/10/2023]
17
Anaraki MT, Lysak DH, Soong R, Simpson MJ, Spraul M, Bermel W, Heumann H, Gundy M, Boenisch H, Simpson AJ. NMR assignment of the in vivo daphnia magna metabolome. Analyst 2020;145:5787-5800. [DOI: 10.1039/d0an01280g] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
18
Benchtop flow NMR spectroscopy as an online device for the in vivo monitoring of lipid accumulation in microalgae. ALGAL RES 2019. [DOI: 10.1016/j.algal.2019.101624] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
19
Lane D, Liaghati Mobarhan Y, Soong R, Ning P, Bermel W, Tabatabaei Anaraki M, Wu B, Heumann H, Gundy M, Boenisch H, Jeong TY, Kovacevic V, Simpson MJ, Simpson AJ. Understanding the Fate of Environmental Chemicals Inside Living Organisms: NMR-Based 13C Isotopic Suppression Selects Only the Molecule of Interest within 13C-Enriched Organisms. Anal Chem 2019;91:15000-15008. [DOI: 10.1021/acs.analchem.9b03596] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
20
Iglesias MJ, Soengas R, Probert I, Guilloud E, Gourvil P, Mehiri M, López Y, Cepas V, Gutiérrez-Del-Río I, Redondo-Blanco S, Villar CJ, Lombó F, Soto S, Ortiz FL. NMR characterization and evaluation of antibacterial and antiobiofilm activity of organic extracts from stationary phase batch cultures of five marine microalgae (Dunaliella sp., D. salina, Chaetoceros calcitrans, C. gracilis and Tisochrysis lutea). PHYTOCHEMISTRY 2019;164:192-205. [PMID: 31174083 DOI: 10.1016/j.phytochem.2019.05.001] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2019] [Revised: 04/11/2019] [Accepted: 05/06/2019] [Indexed: 06/09/2023]
21
Lane D, Skinner TE, Gershenzon NI, Bermel W, Soong R, Dutta Majumdar R, Liaghati Mobarhan Y, Schmidt S, Heumann H, Monette M, Simpson MJ, Simpson AJ. Assessing the potential of quantitative 2D HSQC NMR in 13C enriched living organisms. JOURNAL OF BIOMOLECULAR NMR 2019;73:31-42. [PMID: 30600417 DOI: 10.1007/s10858-018-0221-2] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2018] [Accepted: 12/17/2018] [Indexed: 05/22/2023]
22
Anaraki MT, Lane D, Bastawrous M, Jenne A, Simpson AJ. Metabolic Profiling Using In Vivo High Field Flow NMR. Methods Mol Biol 2019;2037:395-409. [PMID: 31463857 DOI: 10.1007/978-1-4939-9690-2_22] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
23
Tabatabaei Anaraki M, Simpson MJ, Simpson AJ. Reducing impacts of organism variability in metabolomics via time trajectory in vivo NMR. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2018;56:1117-1123. [PMID: 29906816 DOI: 10.1002/mrc.4759] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2018] [Revised: 05/29/2018] [Accepted: 06/02/2018] [Indexed: 06/08/2023]
24
Arnold AA, Bourgouin JP, Genard B, Warschawski DE, Tremblay R, Marcotte I. Whole cell solid-state NMR study of Chlamydomonas reinhardtii microalgae. JOURNAL OF BIOMOLECULAR NMR 2018;70:123-131. [PMID: 29327221 DOI: 10.1007/s10858-018-0164-7] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2017] [Accepted: 01/04/2018] [Indexed: 05/03/2023]
25
Nelson DR, Khraiwesh B, Fu W, Alseekh S, Jaiswal A, Chaiboonchoe A, Hazzouri KM, O'Connor MJ, Butterfoss GL, Drou N, Rowe JD, Harb J, Fernie AR, Gunsalus KC, Salehi-Ashtiani K. The genome and phenome of the green alga Chloroidium sp. UTEX 3007 reveal adaptive traits for desert acclimatization. eLife 2017. [PMID: 28623667 PMCID: PMC5509433 DOI: 10.7554/elife.25783] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]  Open
26
Bliumkin L, Dutta Majumdar R, Soong R, Adamo A, Abbatt JPD, Zhao R, Reiner E, Simpson AJ. Development of an in Situ NMR Photoreactor To Study Environmental Photochemistry. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2016;50:5506-5516. [PMID: 27172272 DOI: 10.1021/acs.est.6b00361] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
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