A novel tryptamine-appended rhodamine-based chemosensor for selective detection of Hg2+ present in aqueous medium and its biological applications

Recent trends and future perspectives of photoresponsive-based mercury (II) sensors and their biomaterial applications

Recent advancements in the field of photoresponsive-based mercury (II) sensors have witnessed a surge in research focused on enhancing detection capabilities. Leveraging innovations in materials science, particularly with quantum dots, nanomaterials, and organic semiconductors, these sensors exhibit improved selectivity and sensitivity. Beyond traditional applications, such as environmental monitoring, the integration of photoresponsive principles with emerging technologies like the internet of things (IoT) and wearable promises real-time and remote mercury (II) ion detection. The on-going efforts also explore multifunctional sensors and miniaturization for on-site applications, addressing current challenges and paving the way for broader commercialization. This dynamic landscape underscores the potential for these sensors to play a crucial role in ensuring the effective monitoring and management of mercury (II) levels in diverse settings.

A Study of Small Molecule-Based Rhodamine-Derived Chemosensors and their Implications in Environmental and Biological Systems from 2012 to 2021: Latest Advancement and Future Prospects

Rhodamine-based chemosensors have sparked considerable interest in recent years due to their remarkable photophysical properties, which include high absorption coefficients, exceptional quantum yields, improved photostability, and significant red shifts. This article presents an overview of the diverse fluorometric, and colorimetric sensors produced from rhodamine, as well as their applications in a wide range of fields. The ability of rhodamine-based chemosensors to detect a wide range of metal ions, including Hg+2, Al3+, Cr3+, Cu2+, Fe3+, Fe2+, Cd2+, Sn4+, Zn2+, and Pb2+, is one of their major advantages. Other applications of these sensors include dual analytes, multianalytes, and relay recognition of dual analytes. Rhodamine-based probes can also detect noble metal ions such as Au3+, Ag+, and Pt2+. They have been used to detect pH, biological species, reactive oxygen and nitrogen species, anions, and nerve agents in addition to metal ions. The probes have been engineered to undergo colorimetric or fluorometric changes upon binding to specific analytes, rendering them highly selective and sensitive by ring-opening via different mechanisms such as Photoinduced Electron Transfer (PET), Chelation Enhanced Fluorescence (CHEF), Intramolecular Charge Transfer (ICT), and Fluorescence Resonance Energy Transfer (FRET). For improved sensing performance, light-harvesting dendritic systems based on rhodamine conjugates has also been explored for enhanced sensing performance. These dendritic arrangements permit the incorporation of numerous rhodamine units, resulting in an improvement in signal amplification and sensitivity. The probes have been utilised extensively for imaging biological samples, including imaging of living cells, and for environmental research. Moreover, they have been combined into logic gates for the construction of molecular computing systems. The usage of rhodamine-based chemosensors has created significant potential in a range of disciplines, including biological and environmental sensing as well as logic gate applications. This study focuses on the work published between 2012 and 2021 and emphasises the enormous research and development potential of these probes.

Targeting genomic DNAs and oligonucleotide on base specificity: A comparative spectroscopic, computational and in vitro study

Drug discovery in targeted nucleic acid therapeutics encompass several stages and rigorous challenges owing to less specificity of the DNA binders and high failure rate in different stages of clinical trials. In this perspective, we report newly synthesized ethyl 4-(pyrrolo[1,2-a]quinolin-4-yl)benzoate (PQN) with minor groove A-T base pair binding selectivity and encouraging in cell results. This pyrrolo quinolin derivative has shown excellent groove binding ability with three of our inspected genomic DNAs (cpDNA 73 % AT, ctDNA58% AT and mlDNA 28 % AT) with varying A-T and G-C content. Notably in spite of similar binding patterns PQN have strong binding preference with A-T rich groove of genomic cpDNA over the ctDNA and mlDNA. Spectroscopic experiments like steady state absorption and emission results have established the relative binding strengths (K_abs = 6.3 × 10⁵ M^-1, 5.6 × 10⁴ M^-1, 4.3 × 10⁴ M^-1 and K_emiss = 6.1 × 10⁵ M^-1, 5.7 × 10⁴ M^-1 and 3.5 × 10⁴ M^-1 for PQN-cpDNA, PQN-ctDNA and PQN-mlDNA respectively) whereas circular dichroism and thermal melting studies have unveiled the groove binding mechanism. Specific A-T base pair attachment with van der Waals interaction and quantitative hydrogen bonding assessment were characterized by computational modeling. In addition to genomic DNAs, preferential A-T base pair binding in minor groove was also observed with our designed and synthesized deca-nucleotide (primer sequences 5^/-GCGAATTCGC-3^/ and 3^/-CGCTTAAGCG-5^/). Cell viability assays (86.13 % in 6.58 μM and 84.01 % in 9.88 μM concentrations) and confocal microscopy revealed low cytotoxicity (IC₅₀ 25.86 μM) and efficient perinuclear localization of PQN. We propose PQN with excellent DNA-minor groove binding capacity and intracellular permeation properties, as a lead for further studies encompassing nucleic acid therapeutics.

A Recent Update on Rhodamine Dye Based Sensor Molecules: A Review

Herein we have discussed such important modified rhodamine compounds which have been used as chemosensors for the last 7-8 years. This review covered some chemosensors for the detection of metal ions like Al(III), Cu(II), Hg(II), Co(II), Fe(III), Au(III), Cr(III), and some anion like CN-. The selectivity, sensitivity, photophysical properties (i.e., UV-Vis spectral studies, fluorescence studies giving special emphasis to absorption wavelength in UV-Vis spectra and excitation and emission wavelength in fluorescence spectra), binding affinity, the limit of detection, and the application of those chemosensors are described clearly. Here we have also discussed some functionalized rhodamine-based chemosensors that emit in the near-infrared region (NIR) and can target lysosomes and detect lysosomal pH. Their versatile applicability in the medicinal ground is also delineated. We have focused on the photophysical properties of spirolactam rhodamine photoswitches and applications in single-molecule localization microscopy and volumetric 3D light photoactivable dye displays. The real-time detection of radical intermediates has also been exemplified.

Engineering Spherically Super-Structured Polyamides for the Sustainable Water Remediation

Unlike metal-ornamented hybrid material and linear polymers, we invoked the growth of a biodegradable superstructured cross-linked polyamide-ester material. The material is thermally stable. The thiol-alkene photoclicked material acted as an efficient water remediator. The material efficiently monitored amphiphilic dyes like rhodamine B (RHB), methylene blue (MB), and chronic mercuric ions in water. The adsorption kinetics revealed the material could adsorb >95% dyes within 24 h. The RHB-functionalized polymer could sense mercuric ions too. The Density functional theory (DFT) calculation shows a chelated mercury complex with thioether in the polymer, Poly-Am-RhAll, to form a comparatively more stable complex.

An oxacalix[4]arene-derived dual-sensing fluorescent probe for the relay recognition of Hg2+ and S2− ions

A rhodamine B-functionalized oxacalix[4]arene architecture has been designed as a dual-responsive probe for the sequential recognition of Hg2+ and S2− ions.

Colorimetric detection of Hg(ii) based on the gold amalgam-triggered reductase mimetic activity in aqueous solution by employing AuNP@MOF nanoparticles

Although the potential of gold amalgam as a nanoenzyme has been demonstrated, its practical utility has been limited by its low catalytic activity caused by the aggregation of Au nanoparticles (Au NPs). Thus, there is a need to further engineer Au NPs to prevent aggregation and then to achieve higher enzyme activities for the detection of Hg2+ ions. Metal organic frameworks (MOFs), as one kind of promising material, have attracted particular attention due to their unique characteristics of uniform cavities and very high porosity. Herein, a hybrid material of Au nanoparticles and a MOF (AuNP@MOF), constructed by immobilization of Au NPs uniformly on the cavity surface of an iron-5,10,15,20-tetrakis (4-carboxyl)-21H,23H-porphyrin-based MOF (Fe-TCPP-MOF), has been successfully synthesized. Based on Hg2+ ion triggered Au catalysis of methylene blue (MB) reduction, a colorimetric method for highly sensitive and selective detection of Hg2+ ions has been established. The Hg2+ ions were first bound to the Au NP surface to form gold amalgam, and then the catalytic activity of Au NPs was initiated. This detection method showed the advantages of a fast response time, and high sensitivity and selectivity. The response time and the limit of detection were as low as 2 s and 103 pM, respectively, benefiting from the uniform cavities and the large specific surface area of Fe-TCPP-MOF, which ensure: (1) uniform dispersion of the Au NPs on the surface of the cavity; and (2) a higher chance of interaction of mercury and MB owing to the gathering effect of Fe-TCPP-MOF.

A novel rhodamine-based optical probe for mercury(II) ion in aqueous medium: A nanomolar detection, wide pH range and real water sample application

In present work, we designed and synthesized new chemosensor RPy, containing the rhodamine and 2,6-pyridinedicarboxaldehyde functionality, for the selective detection of mercury (II) (Hg²⁺) ion in aqueous DMSO solvents. The RPy acts as "turn ON" probe for Hg²⁺ ion with high selectivity and sensitivity over the series of other competing metal ions based on colorimetric and fluorimetric techniques. Due to the incorporation of two rhodamine moieties enhance the chelation sites for mercury binding, which reflects in the lowering of the detection limit up to 26 nM. The Job plot method confirms the 1:2 stoichiometric interactions between the RPy and Hg²⁺ ion. The formation of the chelation complex between RPy and Hg²⁺ ion with spirolactam ring opening was thoroughly investigated by absorption, emission, ¹H NMR, and mass analysis. The detection of Hg²⁺ ion by RPy is retained at broad pH range 4-9. Further, the probe RPy is successfully explored to measure the contamination of Hg²⁺ ion in the real water samples using spike and recovery method.

A rhodamine based biocompatible chemosensor for Al3+, Cr3+ and Fe3+ ions: extraordinary fluorescence enhancement and a precursor for future chemosensors

A rhodamine based chemosensor, 3-(((2-(3',6'-bis(ethylamino)-2',7'-dimethyl-3-oxospiro[isoindoline-1,9'-xanthen]-2-yl)ethyl)imino)methyl)-2-hydroxy-5-methylbenzaldehyde (HL-CHO), has been developed for the detection of Al3+, Cr3+ and Fe3+ ions. The absorbance of HL-CHO at 528 nm increases significantly in HEPES buffer in methanol : water (9 : 1, v/v) (pH 7.4) in the presence of Al3+, Cr3+ and Fe3+ ions with the alteration of solution color from colorless to pink. The fluorescence intensity of the probe at 550 nm enhances by 1465, 588 and 800 fold in the presence of Al3+, Cr3+ and Fe3+ ions, respectively. To the best of our knowledge, this huge increase in fluorescence intensity with Al3+ and Cr3+ has not been observed for other rhodamine based chemosensing systems. The weak fluorescence and no coloration of the probe are due to the existence of a spirolactam ring. The trivalent cations induce the opening of the spirolactam ring and consequently change the color and the fluorescence intensity followed by the 1 : 1 complex formation with HL-CHO which are evident from Job's analysis, ESI mass spectral analysis and elemental analysis. The quantum yield and lifetime of HL-CHO have increased considerably in the presence of the trivalent cations. The high sensitivity of the probe towards all the cations is evident from the nM order of LOD values. This has been used in living cell imaging studies with the human neuroblastoma SH-SY5Y cell line. Having appended -CHO groups for Schiff-base condensation with other amines, HL-CHO could be a potential precursor for future chemosensors.