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Qualitative Screening of Yeast Biodiversity for Hydrolytic Enzymes Isolated from the Gastrointestinal Tract of a Coprophage “Gymnopleurus sturmi” and Dung of Ruminants. FERMENTATION-BASEL 2022. [DOI: 10.3390/fermentation8120692] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
Abstract
In this study, thirty yeast strains isolated from the gut of coprophagous “Gymnopleurus sturmi” and twenty-four from the dung of ruminants were shown to be producers of cellulases. Cellulolytic yeast isolates could also produce other hydrolytic enzymes such as pectinase, lipase, β-glucosidase, catalase, inulinase, urease, gelatinase, and protease. The oroduction of amylase was present in only one isolate of dung of ruminants. On the other hand, the production of tannase was absent in these isolates. All the yeasts isolated from two sources could utilize various carbon sources, including sorbitol, sucrose, and raffinose, and withstand high concentrations of glucose (300 g/L), salt (100 g/L), and exogenous ethanol. They could grow in a wide pH range of 3 to 11. The growth was stable up to a temperature of 40 °C for isolates from the gut of coprophage and 37 °C for the yeast from the dung of ruminants. These activities and growing conditions were similar to the diet of coprophagous insects and the composition of ruminant manure, likely because the adaptation and distribution of these microorganisms depend on the phenology and trophic preferences of these insects.
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Evaluation of Innovative Dried Purée from Jerusalem Artichoke-In Vitro Studies of Its Physicochemical and Health-Promoting Properties. Molecules 2021; 26:molecules26092644. [PMID: 33946573 PMCID: PMC8125012 DOI: 10.3390/molecules26092644] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Revised: 04/27/2021] [Accepted: 04/28/2021] [Indexed: 12/11/2022] Open
Abstract
The present study aimed to evaluate the effect of Jerusalem artichoke processing methods and drying methods (freeze drying, sublimation drying, vacuum drying) on the basic physicochemical parameters, profiles and contents of sugars and polyphenolic compounds, and health-promoting properties (antioxidant activity, inhibition of the activities of α-amylase, α-glucosidase, and pancreatic lipase) of the produced purée. A total of 25 polyphenolic compounds belonging to hydroxycinnamic phenolic acids (LC-PDA-MS-QTof) were detected in Jerusalem artichoke purée. Their average content in the raw material was at 820 mg/100 g dm (UPLC-PDA-FL) and was 2.7 times higher than in the cooked material. The chemical composition and the health-promoting value of the purées were affected by the drying method, with the most beneficial values of the evaluated parameters obtained upon freeze drying. Vacuum drying could offer an alternative to freeze drying, as both methods ensured relatively comparable values of the assessed parameters.
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Optimization of inulinase production by a newly isolated Penicillium amphipolaria strain using solid-state fermentation of hardy sugarcane stems. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2020. [DOI: 10.1016/j.bcab.2020.101875] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Angulo M, Reyes-Becerril M, Medina-Córdova N, Tovar-Ramírez D, Angulo C. Probiotic and nutritional effects of Debaryomyces hansenii on animals. Appl Microbiol Biotechnol 2020; 104:7689-7699. [PMID: 32686006 DOI: 10.1007/s00253-020-10780-z] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2020] [Revised: 07/01/2020] [Accepted: 07/07/2020] [Indexed: 02/06/2023]
Abstract
Debaryomyces hansenii comes of age as a new potential probiotic for terrestrial and aquatic animals. Probiotic properties, including inmunostimulatory effects, gut microbiota modulation, enhanced cell proliferation and differentiation, and digestive function improvements have been related to the oral delivery of D. hansenii. Its functional compounds, such as cell wall components and polyamines, have been identified and implicated in its immunomodulatory activity. In addition, in vitro studies using immune cells have shown standpoints on the possible recognition, regulation, and effector immune mechanisms stimulated by this yeast. This review describes historic, cutting-edge research findings, implications, and perspectives on the use of D. hansenii as a promising probiotic for animals. KEY POINTS: • Debaryomyces hansenii has probiotic effects in terrestrial and aquatic animals. • Nutritional effects could be associated to probiotic D. hansenii strains. • β-D-Glucan and polyamines from D. hansenii are associated to probiotic properties. • Adoption by the industry is expected in the next years.
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Affiliation(s)
- Miriam Angulo
- Immunology & Vaccinology Group, Centro de Investigaciones Biológicas del Noroeste, SC, Instituto Politécnico Nacional 195, Playa Palo de Santa Rita Sur, La Paz, B.C.S., C.P. 23096, Mexico
| | - Martha Reyes-Becerril
- Immunology & Vaccinology Group, Centro de Investigaciones Biológicas del Noroeste, SC, Instituto Politécnico Nacional 195, Playa Palo de Santa Rita Sur, La Paz, B.C.S., C.P. 23096, Mexico
| | - Noe Medina-Córdova
- Immunology & Vaccinology Group, Centro de Investigaciones Biológicas del Noroeste, SC, Instituto Politécnico Nacional 195, Playa Palo de Santa Rita Sur, La Paz, B.C.S., C.P. 23096, Mexico
- Instituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarias, Campo Experimental Todos Santos, Agricultura s/n entre México y Durango, Emiliano Zapata, La Paz, B.C.S., C.P: 23070, Mexico
| | - Dariel Tovar-Ramírez
- Immunology & Vaccinology Group, Centro de Investigaciones Biológicas del Noroeste, SC, Instituto Politécnico Nacional 195, Playa Palo de Santa Rita Sur, La Paz, B.C.S., C.P. 23096, Mexico
| | - Carlos Angulo
- Immunology & Vaccinology Group, Centro de Investigaciones Biológicas del Noroeste, SC, Instituto Politécnico Nacional 195, Playa Palo de Santa Rita Sur, La Paz, B.C.S., C.P. 23096, Mexico.
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Prakash Kamble P, Shivaji Suryawanshi S, Vishnu Kore M, Irani N, Prafulla Jadhav J, Chand Attar Y. Bioconversion of Weedy Waste into Sugary Wealth. Microorganisms 2020. [DOI: 10.5772/intechopen.91316] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
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6
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Do DTH, Theron CW, Fickers P. Organic Wastes as Feedstocks for Non-Conventional Yeast-Based Bioprocesses. Microorganisms 2019; 7:E229. [PMID: 31370226 PMCID: PMC6722544 DOI: 10.3390/microorganisms7080229] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2019] [Revised: 07/26/2019] [Accepted: 07/29/2019] [Indexed: 12/22/2022] Open
Abstract
Non-conventional yeasts are efficient cell factories for the synthesis of value-added compounds such as recombinant proteins, intracellular metabolites, and/or metabolic by-products. Most bioprocess, however, are still designed to use pure, ideal sugars, especially glucose. In the quest for the development of more sustainable processes amid concerns over the future availability of resources for the ever-growing global population, the utilization of organic wastes or industrial by-products as feedstocks to support cell growth is a crucial approach. Indeed, vast amounts of industrial and commercial waste simultaneously represent an environmental burden and an important reservoir for recyclable or reusable material. These alternative feedstocks can provide microbial cell factories with the required metabolic building blocks and energy to synthesize value-added compounds, further representing a potential means of reduction of process costs as well. This review highlights recent strategies in this regard, encompassing knowledge on catabolic pathways and metabolic engineering solutions developed to endow cells with the required metabolic capabilities, and the connection of these to the synthesis of value-added compounds. This review focuses primarily, but not exclusively, on Yarrowia lipolytica as a yeast cell factory, owing to its broad range of naturally metabolizable carbon sources, together with its popularity as a non-conventional yeast.
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Affiliation(s)
- Diem T Hoang Do
- Microbial Processes and Interactions, TERRA Teaching and Research Centre, University of Liège - Gembloux AgroBio Tech, Av. de la Faculté, 2B. B-5030 Gembloux, Belgium
| | - Chrispian W Theron
- Microbial Processes and Interactions, TERRA Teaching and Research Centre, University of Liège - Gembloux AgroBio Tech, Av. de la Faculté, 2B. B-5030 Gembloux, Belgium
| | - Patrick Fickers
- Microbial Processes and Interactions, TERRA Teaching and Research Centre, University of Liège - Gembloux AgroBio Tech, Av. de la Faculté, 2B. B-5030 Gembloux, Belgium.
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Holyavka MG, Artyukhov VG, Makin SM. A Rapid Method for Secondary-Structure Analysis of the Inulinases of Different Microbial Producers. Biophysics (Nagoya-shi) 2018. [DOI: 10.1134/s0006350918010189] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
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8
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Characterization of basidiomycetous yeasts in hypersaline soils of the Urmia Lake National Park, Iran. Extremophiles 2016; 20:915-928. [DOI: 10.1007/s00792-016-0883-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2016] [Accepted: 10/10/2016] [Indexed: 10/20/2022]
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Singh RS, Singh RP, Kennedy JF. Recent insights in enzymatic synthesis of fructooligosaccharides from inulin. Int J Biol Macromol 2016; 85:565-72. [DOI: 10.1016/j.ijbiomac.2016.01.026] [Citation(s) in RCA: 91] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2015] [Revised: 01/04/2016] [Accepted: 01/06/2016] [Indexed: 01/11/2023]
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Rawat HK, Soni H, Treichel H, Kango N. Biotechnological potential of microbial inulinases: Recent perspective. Crit Rev Food Sci Nutr 2016; 57:3818-3829. [DOI: 10.1080/10408398.2016.1147419] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Hemant Kumar Rawat
- Department of Applied Microbiology and Biotechnology, Dr. Harisingh Gour University, Sagar (M.P.), India
| | - Hemant Soni
- Department of Applied Microbiology and Biotechnology, Dr. Harisingh Gour University, Sagar (M.P.), India
| | - Helen Treichel
- Universidade Federal da Fronteira Sul-Campus de Erechim, Erechim, Brazil
| | - Naveen Kango
- Department of Applied Microbiology and Biotechnology, Dr. Harisingh Gour University, Sagar (M.P.), India
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Flores AC, Morlett JA, Rodríguez R. Inulin Potential for Enzymatic Obtaining of Prebiotic Oligosaccharides. Crit Rev Food Sci Nutr 2015; 56:1893-902. [DOI: 10.1080/10408398.2013.807220] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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12
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Zaky AS, Tucker GA, Daw ZY, Du C. Marine yeast isolation and industrial application. FEMS Yeast Res 2014; 14:813-25. [PMID: 24738708 PMCID: PMC4262001 DOI: 10.1111/1567-1364.12158] [Citation(s) in RCA: 67] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2014] [Revised: 04/11/2014] [Accepted: 04/13/2014] [Indexed: 11/29/2022] Open
Abstract
Over the last century, terrestrial yeasts have been widely used in various industries, such as baking, brewing, wine, bioethanol and pharmaceutical protein production. However, only little attention has been given to marine yeasts. Recent research showed that marine yeasts have several unique and promising features over the terrestrial yeasts, for example higher osmosis tolerance, higher special chemical productivity and production of industrial enzymes. These indicate that marine yeasts have great potential to be applied in various industries. This review gathers the most recent techniques used for marine yeast isolation as well as the latest applications of marine yeast in bioethanol, pharmaceutical and enzyme production fields.
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Affiliation(s)
- Abdelrahman Saleh Zaky
- School of Biosciences, University of NottinghamNottingham, UK
- Department of Microbiology, Faculty of Agriculture, Cairo UniversityGiza, Egypt
| | | | - Zakaria Yehia Daw
- Department of Microbiology, Faculty of Agriculture, Cairo UniversityGiza, Egypt
| | - Chenyu Du
- School of Biosciences, University of NottinghamNottingham, UK
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Raggi P, Lopez P, Diaz A, Carrasco D, Silva A, Velez A, Opazo R, Magne F, Navarrete PA. Debaryomyces hanseniiandRhodotorula mucilaginosacomprised the yeast core gut microbiota of wild and reared carnivorous salmonids, croaker and yellowtail. Environ Microbiol 2014; 16:2791-803. [DOI: 10.1111/1462-2920.12397] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2013] [Revised: 01/06/2014] [Accepted: 01/07/2014] [Indexed: 12/15/2022]
Affiliation(s)
- Patricia Raggi
- Laboratorio de Biotecnología; INTA; Universidad de Chile; Santiago Chile
| | - Paulina Lopez
- Laboratorio de Biotecnología; INTA; Universidad de Chile; Santiago Chile
| | - Angélica Diaz
- Laboratorio de Biotecnología; INTA; Universidad de Chile; Santiago Chile
| | - Diana Carrasco
- Laboratorio de Biotecnología; INTA; Universidad de Chile; Santiago Chile
| | - Alfonso Silva
- Laboratorio de Cultivo de Peces; Universidad Católica del Norte; Coquimbo Chile
| | - Antonio Velez
- Centro de Desarrollo y Transferencia Tecnológica (CDTT); Fundación Chile; Tongoy Chile
| | - Rafael Opazo
- Laboratorio de Biotecnología; INTA; Universidad de Chile; Santiago Chile
| | - Fabien Magne
- CNRS UMR7212-Inserm U944-Université Paris Diderot; Conservatoire National des Arts et Métiers (CNAM); Paris France
- Institut de Recherche pour le Développement, delegation; Santiago Chile
| | - Paola A. Navarrete
- Laboratorio de Biotecnología; INTA; Universidad de Chile; Santiago Chile
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Darvishi Harzevili F. Yarrowia lipolytica in Biotechnological Applications. SPRINGERBRIEFS IN MICROBIOLOGY 2014. [DOI: 10.1007/978-3-319-06437-6_2] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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15
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Pouyez J, Mayard A, Vandamme AM, Roussel G, Perpète EA, Wouters J, Housen I, Michaux C. First crystal structure of an endo-inulinase, INU2, from Aspergillus ficuum: Discovery of an extra-pocket in the catalytic domain responsible for its endo-activity. Biochimie 2012; 94:2423-30. [DOI: 10.1016/j.biochi.2012.06.020] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2011] [Accepted: 06/20/2012] [Indexed: 10/28/2022]
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16
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Dilipkumar M, Rajasimman M, Rajamohan N. Application of statistical design for the production of inulinase by streptomyces sp. using pressmud. Front Chem Sci Eng 2011. [DOI: 10.1007/s11705-011-1112-1] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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18
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Bankar AV, Kumar AR, Zinjarde SS. Environmental and industrial applications of Yarrowia lipolytica. Appl Microbiol Biotechnol 2009; 84:847-65. [DOI: 10.1007/s00253-009-2156-8] [Citation(s) in RCA: 128] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2009] [Revised: 07/17/2009] [Accepted: 07/18/2009] [Indexed: 02/06/2023]
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Chi Z, Chi Z, Zhang T, Liu G, Li J, Wang X. Production, characterization and gene cloning of the extracellular enzymes from the marine-derived yeasts and their potential applications. Biotechnol Adv 2009; 27:236-55. [DOI: 10.1016/j.biotechadv.2009.01.002] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2008] [Revised: 12/28/2008] [Accepted: 01/08/2009] [Indexed: 10/21/2022]
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20
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Yu X, Guo N, Chi Z, Gong F, Sheng J, Chi Z. Inulinase overproduction by a mutant of the marine yeast Pichia guilliermondii using surface response methodology and inulin hydrolysis. Biochem Eng J 2009. [DOI: 10.1016/j.bej.2008.10.018] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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21
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Chi Z, Chi Z, Zhang T, Liu G, Yue L. Inulinase-expressing microorganisms and applications of inulinases. Appl Microbiol Biotechnol 2009; 82:211-20. [PMID: 19122997 DOI: 10.1007/s00253-008-1827-1] [Citation(s) in RCA: 130] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2008] [Revised: 12/09/2008] [Accepted: 12/13/2008] [Indexed: 10/21/2022]
Abstract
In this review article, inulinase-expressing microorganisms and its potential applications in transformation of inulin into very-high-fructose syrup, bioethanol, and inulooligosaccharides are overviewed. In the past 10 years, many new inulinase producers have been obtained and many genes encoding inulinases from different microorganisms have been cloned and characterized. Some novel processes for exoinulinase overproduction have been developed for bioethanol production and ultra-high-fructose syrup. The endoinulinases have also been used for production of inulooligosaccharides from inulin and inulin-containing materials.
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Affiliation(s)
- Zhenming Chi
- Unesco Chinese Center of Marine Biotechnology, Ocean University of China, Yushan Road, No. 5, Qingdao, China.
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Guo N, Gong F, Chi Z, Sheng J, Li J. Enhanced inulinase production in solid state fermentation by a mutant of the marine yeast Pichia guilliermondii using surface response methodology and inulin hydrolysis. J Ind Microbiol Biotechnol 2008; 36:499-507. [PMID: 19107534 DOI: 10.1007/s10295-008-0519-2] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2008] [Accepted: 12/10/2008] [Indexed: 11/30/2022]
Abstract
In order to isolate inulinase overproducers of the marine yeast Pichia guilliermondii, strain 1, cells were mutated by using UV light and LiCl(2). One mutant (M-30) with enhanced inulinase production was obtained. Response surface methodology (RSM) was used to optimize the medium compositions and cultivation conditions for inulinase production by the mutant in solid-state fermentation. The initial moisture, inoculum, the amount ratio of wheat bran to rice bran, temperature, pH for the maximum inulinase production by the mutant M-30 were found to be 60.5%, 2.5%, 0.42, 30 degrees C and 6.50, respectively. Under the optimized conditions, 455.9 U/grams of dry substrate (gds) of inulinase activity was reached in the solid state fermentation culture of the mutant M-30 whereas the predicted maximum inulinase activity of 459.2 U/gds was derived from RSM regression. Under the same conditions, its parent strain only produced 291.0 U/gds of inulinase activity. This is the highest inulinase activity produced by the yeast strains reported so far.
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Affiliation(s)
- Ning Guo
- UNESCO Chinese Center of Marine Biotechnology, Ocean University of China, Yushan Road, No. 5, Qingdao, China
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Current awareness on yeast. Yeast 2008. [DOI: 10.1002/yea.1459] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
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