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Barcoto MO, Rodrigues A. Lessons From Insect Fungiculture: From Microbial Ecology to Plastics Degradation. Front Microbiol 2022; 13:812143. [PMID: 35685924 PMCID: PMC9171207 DOI: 10.3389/fmicb.2022.812143] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Accepted: 03/15/2022] [Indexed: 11/13/2022] Open
Abstract
Anthropogenic activities have extensively transformed the biosphere by extracting and disposing of resources, crossing boundaries of planetary threat while causing a global crisis of waste overload. Despite fundamental differences regarding structure and recalcitrance, lignocellulose and plastic polymers share physical-chemical properties to some extent, that include carbon skeletons with similar chemical bonds, hydrophobic properties, amorphous and crystalline regions. Microbial strategies for metabolizing recalcitrant polymers have been selected and optimized through evolution, thus understanding natural processes for lignocellulose modification could aid the challenge of dealing with the recalcitrant human-made polymers spread worldwide. We propose to look for inspiration in the charismatic fungal-growing insects to understand multipartite degradation of plant polymers. Independently evolved in diverse insect lineages, fungiculture embraces passive or active fungal cultivation for food, protection, and structural purposes. We consider there is much to learn from these symbioses, in special from the community-level degradation of recalcitrant biomass and defensive metabolites. Microbial plant-degrading systems at the core of insect fungicultures could be promising candidates for degrading synthetic plastics. Here, we first compare the degradation of lignocellulose and plastic polymers, with emphasis in the overlapping microbial players and enzymatic activities between these processes. Second, we review the literature on diverse insect fungiculture systems, focusing on features that, while supporting insects' ecology and evolution, could also be applied in biotechnological processes. Third, taking lessons from these microbial communities, we suggest multidisciplinary strategies to identify microbial degraders, degrading enzymes and pathways, as well as microbial interactions and interdependencies. Spanning from multiomics to spectroscopy, microscopy, stable isotopes probing, enrichment microcosmos, and synthetic communities, these strategies would allow for a systemic understanding of the fungiculture ecology, driving to application possibilities. Detailing how the metabolic landscape is entangled to achieve ecological success could inspire sustainable efforts for mitigating the current environmental crisis.
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Affiliation(s)
- Mariana O. Barcoto
- Center for the Study of Social Insects, São Paulo State University (UNESP), Rio Claro, Brazil
- Department of General and Applied Biology, São Paulo State University (UNESP), Rio Claro, Brazil
| | - Andre Rodrigues
- Center for the Study of Social Insects, São Paulo State University (UNESP), Rio Claro, Brazil
- Department of General and Applied Biology, São Paulo State University (UNESP), Rio Claro, Brazil
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Arab A, Issa S, Aguilera-Olivares D. Editorial: Advances in the Evolutionary Ecology of Termites. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.698937] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Moreira EA, Persinoti GF, Menezes LR, Paixão DAA, Alvarez TM, Cairo JPLF, Squina FM, Costa-Leonardo AM, Rodrigues A, Sillam-Dussès D, Arab A. Complementary Contribution of Fungi and Bacteria to Lignocellulose Digestion in the Food Stored by a Neotropical Higher Termite. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.632590] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
Lignocellulose digestion in termites is achieved through the functional synergy between gut symbionts and host enzymes. However, some species have evolved additional associations with nest microorganisms that collaborate in the decomposition of plant biomass. In a previous study, we determined that plant material packed with feces inside the nests of Cornitermes cumulans (Syntermitinae) harbors a distinct microbial assemblage. These food nodules also showed a high hemicellulolytic activity, possibly acting as an external place for complementary lignocellulose digestion. In this study, we used a combination of ITS sequence analysis, metagenomics, and metatranscriptomics to investigate the presence and differential expression of genes coding for carbohydrate-active enzymes (CAZy) in the food nodules and the gut of workers and soldiers. Our results confirm that food nodules express a distinct set of CAZy genes suggesting that stored plant material is initially decomposed by enzymes that target the lignin and complex polysaccharides from fungi and bacteria before the passage through the gut, where it is further targeted by a complementary set of cellulases, xylanases, and esterases produced by the gut microbiota and the termite host. We also showed that the expression of CAZy transcripts associated to endoglucanases and xylanases was higher in the gut of termites than in the food nodules. An additional finding in this study was the presence of fungi in the termite gut that expressed CAZy genes. This study highlights the importance of externalization of digestion by nest microbes and provides new evidence of complementary digestion in the context of higher termite evolution.
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Větrovský T, Soukup P, Stiblik P, Votýpková K, Chakraborty A, Larrañaga IO, Sillam-Dussès D, Lo N, Bourguignon T, Baldrian P, Šobotník J, Kolařík M. Termites host specific fungal communities that differ from those in their ambient environments. FUNGAL ECOL 2020. [DOI: 10.1016/j.funeco.2020.100991] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Janei V, Haifig I, Schönhaus GC, Costa-Leonardo AM. Gut Content and Laboratory Survival of the Termite Cornitermes cumulans (Isoptera: Termitidae: Syntermitinae) with Different Diets Including Nest Stored Food. NEOTROPICAL ENTOMOLOGY 2020; 49:677-684. [PMID: 32705452 DOI: 10.1007/s13744-020-00796-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2020] [Accepted: 06/09/2020] [Indexed: 06/11/2023]
Abstract
Cornitermes cumulans (Kollar, 1832) is a mound-building termite that stores food nodules in the nest, which seems to be pre-chewed and regurgitated by workers. Information on the food resources used by this species is still scarce, and this study aimed to understand the feeding habits of C. cumulans using a qualitative analysis of the worker gut contents, and to select the best food to keep termites under laboratorial conditions. Thus, four food resources and five artificial diets were tested to evaluate the laboratory survival of C. cumulans. Food nodules from nests were used as a positive control, and no food was available in cages for negative control. Ten replicates using 30 workers plus three soldiers were performed for each type of food and for each control. The experiments were daily examined for termite survival during a 40-day period. Data were analyzed using the log-rank (Mantel-cox) test (P < 0.05). The qualitative analysis of the gut contents showed different materials, such as plant parts, fungi, and minerals. Data analysis showed that all of the survival curves of termites fed with artificial diets and food items were significantly different from that obtained with termites fed on food nodules, which showed the highest survival, followed by the diets of α-cellulose, corn stalk, and sugarcane bagasse. Then, our findings showed that the most adequate artificial foods to maintain populations of C. cumulans in the laboratory were the diets of α-cellulose, corn stalk, and sugarcane bagasse.
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Affiliation(s)
- V Janei
- Lab de Cupins, Depto de Biologia, Instituto de Biociências, Univ Estadual Paulista, UNESP, Rio Claro, SP, Brasil
| | - I Haifig
- Center for Natural and Human Sciences, Federal Univ of ABC, UFABC, São Bernardo do Campo, Brasil
| | - G C Schönhaus
- Lab de Cupins, Depto de Biologia, Instituto de Biociências, Univ Estadual Paulista, UNESP, Rio Claro, SP, Brasil
| | - A M Costa-Leonardo
- Lab de Cupins, Depto de Biologia, Instituto de Biociências, Univ Estadual Paulista, UNESP, Rio Claro, SP, Brasil.
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Integrative omics analysis of the termite gut system adaptation to Miscanthus diet identifies lignocellulose degradation enzymes. Commun Biol 2020; 3:275. [PMID: 32483294 PMCID: PMC7264248 DOI: 10.1038/s42003-020-1004-3] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2019] [Accepted: 05/13/2020] [Indexed: 01/05/2023] Open
Abstract
Miscanthus sp. biomass could satisfy future biorefinery value chains. However, its use is largely untapped due to high recalcitrance. The termite and its gut microbiome are considered the most efficient lignocellulose degrading system in nature. Here, we investigate at holobiont level the dynamic adaptation of Cortaritermes sp. to imposed Miscanthus diet, with a long-term objective of overcoming lignocellulose recalcitrance. We use an integrative omics approach combined with enzymatic characterisation of carbohydrate active enzymes from termite gut Fibrobacteres and Spirochaetae. Modified gene expression profiles of gut bacteria suggest a shift towards utilisation of cellulose and arabinoxylan, two main components of Miscanthus lignocellulose. Low identity of reconstructed microbial genomes to closely related species supports the hypothesis of a strong phylogenetic relationship between host and its gut microbiome. This study provides a framework for better understanding the complex lignocellulose degradation by the higher termite gut system and paves a road towards its future bioprospecting. Through metagenomics and metatranscriptomics analyses, Calusinska et al. investigate the adaptation of the gut microbiome of the termite Cortaritermes sp. to a diet of Miscanthus grass. This work is a starting point for the identification of lignocellulose-degradation enzymes for potential biotechnology applications.
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Ledón-Rettig CC, Moczek AP, Ragsdale EJ. Diplogastrellus nematodes are sexually transmitted mutualists that alter the bacterial and fungal communities of their beetle host. Proc Natl Acad Sci U S A 2018; 115:10696-10701. [PMID: 30275294 PMCID: PMC6196496 DOI: 10.1073/pnas.1809606115] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023] Open
Abstract
A recent accumulation of studies has demonstrated that nongenetic, maternally transmitted factors are often critical to the health and development of offspring and can therefore play a role in ecological and evolutionary processes. In particular, microorganisms such as bacteria have been championed as heritable, symbiotic partners capable of conferring fitness benefits to their hosts. At the same time, parents may also pass various nonmicrobial organisms to their offspring, yet the roles of such organisms in shaping the developmental environment of their hosts remain largely unexplored. Here, we show that the nematode Diplogastrellus monhysteroides is transgenerationally inherited and sexually transmitted by the dung beetle Onthophagus taurus By manipulating artificial chambers in which beetle offspring develop, we demonstrate that the presence of D. monhysteroides nematodes enhances the growth of beetle offspring, empirically challenging the paradigm that nematodes are merely commensal or even detrimental to their insect hosts. Finally, our research presents a compelling mechanism whereby the nematodes influence the health of beetle larvae: D. monhysteroides nematodes engineer the bacterial and fungal communities that also inhabit the beetle developmental chambers, including specific taxa known to be involved in biomass degradation, possibly allowing larval beetles better access to their otherwise recalcitrant, plant-based diet. Thus, our findings illustrate that nongenetic inheritance can include intermediately sized organisms that live and proliferate in close association with, and in certain cases enhance, the development of their hosts' offspring.
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Affiliation(s)
| | - Armin P Moczek
- Department of Biology, Indiana University, Bloomington, IN 47405
| | - Erik J Ragsdale
- Department of Biology, Indiana University, Bloomington, IN 47405
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Moreira EA, Alvarez TM, Persinoti GF, Paixão DAA, Menezes LR, Cairo JPF, Squina FM, Costa-Leonardo AM, Carrijo T, Arab A. Microbial Communities of the Gut and Nest of the Humus- and Litter-Feeding Termite Procornitermes araujoi (Syntermitinae). Curr Microbiol 2018; 75:1609-1618. [PMID: 30209570 DOI: 10.1007/s00284-018-1567-0] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2018] [Accepted: 09/06/2018] [Indexed: 12/17/2022]
Abstract
The evolution of the symbiotic association with microbes allowed termites to decompose ingested lignocellulose from plant-derived substrates, including herbivore dung and soil humus. Representatives of the Syntermitinae (Termitidae) range in their feeding habits from wood and litter-feeding to humus-feeding species. However, only limited information is available about their feeding ecology and associated microbial communities. Here we conducted a study of the microbial communities associated to the termite Procornitermes araujoi using Illumina sequencing of the 16S and ITS rRNA genes. This species has been previously included in different feeding guilds. However, most aspects of its feeding ecology are unknown, especially those associated to its symbiotic microbiota. Our results showed that the microbial communities of termite guts and nest substrates of P. araujoi differed significantly for bacteria and fungi. Firmicutes dominated the bacterial gut community of both workers and soldiers, whereas Actinobacteria was found in higher prevalence in the nest walls. Sordariomycetes was the most abundant fungal class in both gut and nest samples and distinguish P. araujoi from the grass/litter feeding Cornitermes cumulans. Our results also showed that diversity of gut bacteria were higher in P. araujoi and Silvestritermes euamignathus than in the grass/litter feeders (C. cumulans and Syntermes dirus), that could indicate an adaptation of the microbial community of polyphagous termites to the higher complexity of their diets.
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Affiliation(s)
- Edimar A Moreira
- Centro de Ciências Naturais e Humanas, Universidade Federal do ABC (UFABC), Santo André, SP, 09210-580, Brazil
| | - Thabata M Alvarez
- Mestrado em Biotecnologia Industrial, Universidade Positivo, Curitiba, 81280-330, PR, Brazil
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol (CTBE), Centro Nacional de Pesquisa em Energia e Materiais, CNPEM, Campinas, 13083-970, SP, Brazil
| | - Gabriela F Persinoti
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol (CTBE), Centro Nacional de Pesquisa em Energia e Materiais, CNPEM, Campinas, 13083-970, SP, Brazil
| | - Douglas Antonio Alvaredo Paixão
- Laboratório Nacional de Ciência e Tecnologia do Bioetanol (CTBE), Centro Nacional de Pesquisa em Energia e Materiais, CNPEM, Campinas, 13083-970, SP, Brazil
| | - Letícia R Menezes
- Departamento de Biologia, Instituto de Biociências, Universidade Estadual Paulista (UNESP), Rio Claro, SP, Brazil
| | - João P Franco Cairo
- Departamento de Bioquímica e Biologia Tecidual, Instituto de Biologia, UNICAMP, Campinas, SP, Brazil
| | - Fabio Marcio Squina
- Programa em Processos Tecnológicos e Ambientais, Universidade de Sorocaba (UNISO), Sorocaba, SP, Brazil
| | - Ana M Costa-Leonardo
- Departamento de Biologia, Instituto de Biociências, Universidade Estadual Paulista (UNESP), Rio Claro, SP, Brazil
| | - Tiago Carrijo
- Centro de Ciências Naturais e Humanas, Universidade Federal do ABC (UFABC), Santo André, SP, 09210-580, Brazil
| | - Alberto Arab
- Centro de Ciências Naturais e Humanas, Universidade Federal do ABC (UFABC), Santo André, SP, 09210-580, Brazil.
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