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For: Shiraga S, Ishiguro M, Fukami H, Nakao M, Ueda M. Creation of Rhizopus oryzae lipase having a unique oxyanion hole by combinatorial mutagenesis in the lid domain. Appl Microbiol Biotechnol 2005;68:779-85. [PMID: 15729555 DOI: 10.1007/s00253-005-1935-0] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2004] [Revised: 01/28/2005] [Accepted: 02/03/2005] [Indexed: 10/25/2022]
Number Cited by Other Article(s)
1
Tütüncü HE, Durmuş N, Sürmeli Y. Unraveling the potential of uninvestigated thermoalkaliphilic lipases by molecular docking and molecular dynamic simulation: an in silico characterization study. 3 Biotech 2024;14:179. [PMID: 38882640 PMCID: PMC11176153 DOI: 10.1007/s13205-024-04023-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Accepted: 05/29/2024] [Indexed: 06/18/2024]  Open
2
Hwang DH, Lee ME, Cho BH, Oh JW, You SK, Ko YJ, Hyeon JE, Han SO. Enhanced biodegradation of waste poly(ethylene terephthalate) using a reinforced plastic degrading enzyme complex. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022;842:156890. [PMID: 35753492 DOI: 10.1016/j.scitotenv.2022.156890] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Revised: 05/28/2022] [Accepted: 06/18/2022] [Indexed: 06/15/2023]
3
Ma'ruf IF, Widhiastuty MP, Suharti, Moeis MR, Akhmaloka. Effect of mutation at oxyanion hole residu (H110F) on activity of Lk4 lipase. ACTA ACUST UNITED AC 2021;29:e00590. [PMID: 33532247 PMCID: PMC7823203 DOI: 10.1016/j.btre.2021.e00590] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Revised: 12/15/2020] [Accepted: 01/01/2021] [Indexed: 11/28/2022]
4
Rhizopus oryzae Lipase, a Promising Industrial Enzyme: Biochemical Characteristics, Production and Biocatalytic Applications. Catalysts 2020. [DOI: 10.3390/catal10111277] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]  Open
5
Johnson AN, Barlow DE, Kelly AL, Varaljay VA, Crookes‐Goodson WJ, Biffinger JC. Current progress towards understanding the biodegradation of synthetic condensation polymers with active hydrolases. POLYM INT 2020. [DOI: 10.1002/pi.6131] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
6
Cui H, Stadtmüller THJ, Jiang Q, Jaeger K, Schwaneberg U, Davari MD. How to Engineer Organic Solvent Resistant Enzymes: Insights from Combined Molecular Dynamics and Directed Evolution Study. ChemCatChem 2020. [DOI: 10.1002/cctc.202000422] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
7
Dulcey CE, López de Los Santos Y, Létourneau M, Déziel E, Doucet N. Semi-rational evolution of the 3-(3-hydroxyalkanoyloxy)alkanoate (HAA) synthase RhlA to improve rhamnolipid production in Pseudomonas aeruginosa and Burkholderia glumae. FEBS J 2019;286:4036-4059. [PMID: 31177633 DOI: 10.1111/febs.14954] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2018] [Revised: 04/12/2019] [Accepted: 06/06/2019] [Indexed: 12/15/2022]
8
Yu S, Shen H, Cheng Y, Zhu Y, Li X, Mu W. Structural and Functional Basis of Difructose Anhydride III Hydrolase, Which Sequentially Converts Inulin Using the Same Catalytic Residue. ACS Catal 2018. [DOI: 10.1021/acscatal.8b02424] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
9
Padkina MV, Sambuk EV. Prospects for the Application of Yeast Display in Biotechnology and Cell Biology (Review). APPL BIOCHEM MICRO+ 2018. [DOI: 10.1134/s0003683818040105] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
10
Ueda M. Establishment of cell surface engineering and its development. Biosci Biotechnol Biochem 2016;80:1243-53. [PMID: 27305282 DOI: 10.1080/09168451.2016.1153953] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
11
Generation of a Functionally Distinct Rhizopus oryzae Lipase through Protein Folding Memory. PLoS One 2015;10:e0124545. [PMID: 25970342 PMCID: PMC4430139 DOI: 10.1371/journal.pone.0124545] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2015] [Accepted: 03/05/2015] [Indexed: 11/29/2022]  Open
12
Miura N, Kuroda K, Ueda M. Enzyme Evolution by Yeast Cell Surface Engineering. Methods Mol Biol 2015;1319:217-232. [PMID: 26060078 DOI: 10.1007/978-1-4939-2748-7_12] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
13
Engineering of Yarrowia lipolytica lipase Lip8p by circular permutation to alter substrate and temperature characteristics. ACTA ACUST UNITED AC 2014;41:757-62. [DOI: 10.1007/s10295-014-1428-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2013] [Accepted: 02/25/2014] [Indexed: 10/25/2022]
14
Kuroda K, Ueda M. Arming Technology in Yeast-Novel Strategy for Whole-cell Biocatalyst and Protein Engineering. Biomolecules 2013;3:632-50. [PMID: 24970185 PMCID: PMC4030959 DOI: 10.3390/biom3030632] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2013] [Revised: 08/28/2013] [Accepted: 09/02/2013] [Indexed: 11/30/2022]  Open
15
Zhu SS, Li M, Yu X, Xu Y. Role of Met93 and Thr96 in the lid hinge region of Rhizopus chinensis lipase. Appl Biochem Biotechnol 2013;170:436-47. [PMID: 23546870 DOI: 10.1007/s12010-013-0209-z] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2012] [Accepted: 03/18/2013] [Indexed: 10/27/2022]
16
Nagayama M, Maeda H, Kuroda K, Ueda M. Mutated Intramolecular Chaperones Generate High-Activity Isomers of Mature Enzymes. Biochemistry 2012;51:3547-53. [DOI: 10.1021/bi3001159] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
17
Gera N, Hussain M, Rao BM. Protein selection using yeast surface display. Methods 2012;60:15-26. [PMID: 22465794 DOI: 10.1016/j.ymeth.2012.03.014] [Citation(s) in RCA: 92] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2011] [Accepted: 03/09/2012] [Indexed: 12/16/2022]  Open
18
Hong Lim K, Hwang I, Park S. Biotin-assisted folding of streptavidin on the yeast surface. Biotechnol Prog 2011;28:276-83. [DOI: 10.1002/btpr.721] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2011] [Revised: 07/31/2011] [Indexed: 01/28/2023]
19
Kourist R, Brundiek H, Bornscheuer UT. Protein engineering and discovery of lipases. EUR J LIPID SCI TECH 2010. [DOI: 10.1002/ejlt.200900143] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
20
SHIBASAKI S, MAEDA H, UEDA M. Molecular Display Technology Using Yeast-Arming Technology-. ANAL SCI 2009;25:41-9. [DOI: 10.2116/analsci.25.41] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
21
Boersma YL, Pijning T, Bosma MS, van der Sloot AM, Godinho LF, Dröge MJ, Winter RT, van Pouderoyen G, Dijkstra BW, Quax WJ. Loop Grafting of Bacillus subtilis Lipase A: Inversion of Enantioselectivity. ACTA ACUST UNITED AC 2008;15:782-9. [DOI: 10.1016/j.chembiol.2008.06.009] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2008] [Revised: 05/06/2008] [Accepted: 06/06/2008] [Indexed: 11/26/2022]
22
Kadonosono T, Kato-Murai M, Ueda M. Alteration of substrate specificity of rat neurolysin from matrix metalloproteinase-2/9-type to -3-type specificity by comprehensive mutation. Protein Eng Des Sel 2008;21:507-13. [DOI: 10.1093/protein/gzn026] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
23
Lipovšek D, Antipov E, Armstrong KA, Olsen MJ, Klibanov AM, Tidor B, Wittrup KD. Selection of Horseradish Peroxidase Variants with Enhanced Enantioselectivity by Yeast Surface Display. ACTA ACUST UNITED AC 2007;14:1176-85. [DOI: 10.1016/j.chembiol.2007.09.008] [Citation(s) in RCA: 83] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2007] [Revised: 08/28/2007] [Accepted: 09/18/2007] [Indexed: 11/26/2022]
24
Gai SA, Wittrup KD. Yeast surface display for protein engineering and characterization. Curr Opin Struct Biol 2007;17:467-73. [PMID: 17870469 PMCID: PMC4038029 DOI: 10.1016/j.sbi.2007.08.012] [Citation(s) in RCA: 269] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2007] [Revised: 08/03/2007] [Accepted: 08/19/2007] [Indexed: 11/23/2022]
25
Kadonosono T, Kato M, Ueda M. Substrate specificity of rat brain neurolysin disclosed by molecular display system and putative substrates in rat tissues. Appl Microbiol Biotechnol 2007;75:1353-60. [PMID: 17401561 DOI: 10.1007/s00253-007-0943-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2007] [Revised: 03/05/2007] [Accepted: 03/07/2007] [Indexed: 11/24/2022]
26
Kato M, Fuchimoto J, Tanino T, Kondo A, Fukuda H, Ueda M. Preparation of a whole-cell biocatalyst of mutated Candida antarctica lipase B (mCALB) by a yeast molecular display system and its practical properties. Appl Microbiol Biotechnol 2007;75:549-55. [PMID: 17262207 DOI: 10.1007/s00253-006-0835-2] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2006] [Revised: 12/25/2006] [Accepted: 12/28/2006] [Indexed: 10/23/2022]
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