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Hahn T, Alzate MO, Leonhardt S, Tamang P, Zibek S. Current trends in medium-chain-length polyhydroxyalkanoates: Microbial production, purification, and characterization. Eng Life Sci 2024; 24:2300211. [PMID: 38845815 PMCID: PMC11151071 DOI: 10.1002/elsc.202300211] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Revised: 02/05/2024] [Accepted: 02/21/2024] [Indexed: 06/09/2024] Open
Abstract
Polyhydroxyalkanoates (PHAs) have gained interest recently due to their biodegradability and versatility. In particular, the chemical compositions of medium-chain-length (mcl)-PHAs are highly diverse, comprising different monomers containing 6-14 carbon atoms. This review summarizes different feedstocks and fermentation strategies to enhance mcl-PHA production and briefly discusses the downstream processing. This review also provides comprehensive details on analytical tools for determining the composition and properties of mcl-PHA. Moreover, this study provides novel information by statistically analyzing the data collected from several reports on mcl-PHA to determine the optimal fermentation parameters (specific growth rate, PHA productivity, and PHA yield from various structurally related and unrelated substrates), mcl-PHA composition, molecular weight (MW), and thermal and mechanical properties, in addition to other relevant statistical values. The analysis revealed that the median PHA productivity observed in the fed-batch feeding strategy was 0.4 g L-1 h-1, which is eight times higher than that obtained from batch feeding (0.05 g L-1 h-1). Furthermore, 3-hydroxyoctanoate and -decanoate were the primary monomers incorporated into mcl-PHA. The investigation also determined the median glass transition temperature (-43°C) and melting temperature (47°C), which indicated that mcl-PHA is a flexible amorphous polymer at room temperature with a median MW of 104 kDa. However, information on the monomer composition or heterogeneity and the associated physical and mechanical data of mcl-PHAs is inadequate. Based on their mechanical values, the mcl-PHAs can be classified as semi-crystalline polymers (median crystallinity 23%) with rubber-like properties and a median elongation at break of 385%. However, due to the limited mechanical data available for mcl-PHAs with known monomer composition, identifying suitable processing tools and applications to develop mcl-PHAs further is challenging.
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Affiliation(s)
- Thomas Hahn
- Bioprocess DevelopmentFraunhofer Institute for Interfacial Engineering and Biotechnology IGBStuttgartGermany
| | - Melissa Ortega Alzate
- Bioprocess DevelopmentFraunhofer Institute for Interfacial Engineering and Biotechnology IGBStuttgartGermany
- Department of Chemical EngineeringUniversity of AntioquiaEl Carmen de ViboralColombia
| | - Steven Leonhardt
- Bioprocess DevelopmentFraunhofer Institute for Interfacial Engineering and Biotechnology IGBStuttgartGermany
| | - Pravesh Tamang
- Bioprocess DevelopmentFraunhofer Institute for Interfacial Engineering and Biotechnology IGBStuttgartGermany
| | - Susanne Zibek
- Bioprocess DevelopmentFraunhofer Institute for Interfacial Engineering and Biotechnology IGBStuttgartGermany
- Institute of Interfacial Engineering and Plasma Technology IGVPUniversity of StuttgartStuttgartGermany
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2
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Cerrone F, Zhou B, Mouren A, Avérous L, Conroy S, Simpson JC, O'Connor KE, Narancic T. Pseudomonas umsongensis GO16 as a platform for the in vivo synthesis of short and medium chain length polyhydroxyalkanoate blends. BIORESOURCE TECHNOLOGY 2023; 387:129668. [PMID: 37572888 DOI: 10.1016/j.biortech.2023.129668] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2023] [Revised: 08/08/2023] [Accepted: 08/09/2023] [Indexed: 08/14/2023]
Abstract
Polyhydroxyalkanoates (PHAs) are biological polyesters, viewed as a replacement for petrochemical plastic. However, they suffer from suboptimal physical and mechanical properties. Here, it was shown that a metabolically versatile Pseudomonas umsongensis GO16 can synthesise a blend of short chain length (scl) and medium chain length (mcl)-PHA. A defined mix of butyric (BA) and octanoic acid (OA) in different ratios was used. The PHA monomer composition varied depending on the feeding strategy. When OA and BA were fed at 80:20 ratio it showed 14, 8, 77 and 1 mol% of (R)-3-hydroxybutyrate, (R)-3-hydroxyhexanoate, (R)-3-hydroxyoctanoate and (R)-3-hydroxydecanoate respectively. The polymer characterisation clearly shows that polyhydroxybutyrate (PHB) and mcl-PHA are produced individually. The two polymers are blended on the PHA granule level, as demonstrated by fluorescence microscopy and yeast two-hybrid assay. The resulting blend has a specific viscoelasticity compared to PHB and PHO. Mcl-PHA acts as a plasticiser and reduces PHB brittleness.
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Affiliation(s)
- Federico Cerrone
- UCD Earth Institute and School of Biomolecular and Biomedical Science, University College Dublin, Belfield, Dublin 4, Ireland; BiOrbic - Bioeconomy Research Centre, Ireland, University College Dublin, Belfield, Dublin 4, Ireland
| | - Binbin Zhou
- UCD Earth Institute and School of Biomolecular and Biomedical Science, University College Dublin, Belfield, Dublin 4, Ireland; BiOrbic - Bioeconomy Research Centre, Ireland, University College Dublin, Belfield, Dublin 4, Ireland
| | - Agathe Mouren
- BioTeam/ICPEES-ECPM, UMR CNRS 7515, Strasbourg University, 25 rue Becquerel, F-67087, Strasbourg Cedex 2, France
| | - Luc Avérous
- BioTeam/ICPEES-ECPM, UMR CNRS 7515, Strasbourg University, 25 rue Becquerel, F-67087, Strasbourg Cedex 2, France
| | - Stephen Conroy
- UCD Earth Institute and School of Biomolecular and Biomedical Science, University College Dublin, Belfield, Dublin 4, Ireland; BiOrbic - Bioeconomy Research Centre, Ireland, University College Dublin, Belfield, Dublin 4, Ireland
| | - Jeremy C Simpson
- Cell Screening Laboratory, School of Biology and Environmental Science, University College Dublin, Science Centre West, Belfield, Dublin 4, Ireland
| | - Kevin E O'Connor
- UCD Earth Institute and School of Biomolecular and Biomedical Science, University College Dublin, Belfield, Dublin 4, Ireland; BiOrbic - Bioeconomy Research Centre, Ireland, University College Dublin, Belfield, Dublin 4, Ireland
| | - Tanja Narancic
- UCD Earth Institute and School of Biomolecular and Biomedical Science, University College Dublin, Belfield, Dublin 4, Ireland; BiOrbic - Bioeconomy Research Centre, Ireland, University College Dublin, Belfield, Dublin 4, Ireland.
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3
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Gao Q, Yang H, Wang C, Xie XY, Liu KX, Lin Y, Han SY, Zhu M, Neureiter M, Lin Y, Ye JW. Advances and trends in microbial production of polyhydroxyalkanoates and their building blocks. Front Bioeng Biotechnol 2022; 10:966598. [PMID: 35928942 PMCID: PMC9343942 DOI: 10.3389/fbioe.2022.966598] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2022] [Accepted: 07/01/2022] [Indexed: 11/13/2022] Open
Abstract
With the rapid development of synthetic biology, a variety of biopolymers can be obtained by recombinant microorganisms. Polyhydroxyalkanoates (PHA) is one of the most popular one with promising material properties, such as biodegradability and biocompatibility against the petrol-based plastics. This study reviews the recent studies focusing on the microbial synthesis of PHA, including chassis engineering, pathways engineering for various substrates utilization and PHA monomer synthesis, and PHA synthase modification. In particular, advances in metabolic engineering of dominant workhorses, for example Halomonas, Ralstonia eutropha, Escherichia coli and Pseudomonas, with outstanding PHA accumulation capability, were summarized and discussed, providing a full landscape of diverse PHA biosynthesis. Meanwhile, we also introduced the recent efforts focusing on structural analysis and mutagenesis of PHA synthase, which significantly determines the polymerization activity of varied monomer structures and PHA molecular weight. Besides, perspectives and solutions were thus proposed for achieving scale-up PHA of low cost with customized material property in the coming future.
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Affiliation(s)
- Qiang Gao
- Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining, QH, China
| | - Hao Yang
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China
| | - Chi Wang
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China
| | - Xin-Ying Xie
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China
| | - Kai-Xuan Liu
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China
| | - Ying Lin
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China
| | - Shuang-Yan Han
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China
| | - Mingjun Zhu
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China
| | - Markus Neureiter
- Institute for Environmental Biotechnology, Department of Agrobiotechnology, University of Natural Resources and Life Sciences, Tulln, Austria
- *Correspondence: Markus Neureiter, ; Yina Lin, ; Jian-Wen Ye,
| | - Yina Lin
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China
- *Correspondence: Markus Neureiter, ; Yina Lin, ; Jian-Wen Ye,
| | - Jian-Wen Ye
- School of Biology and Biological Engineering, South China University of Technology, Guangzhou, China
- *Correspondence: Markus Neureiter, ; Yina Lin, ; Jian-Wen Ye,
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4
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Review of the Developments of Bacterial Medium-Chain-Length Polyhydroxyalkanoates (mcl-PHAs). Bioengineering (Basel) 2022; 9:bioengineering9050225. [PMID: 35621503 PMCID: PMC9137849 DOI: 10.3390/bioengineering9050225] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2022] [Revised: 05/13/2022] [Accepted: 05/17/2022] [Indexed: 12/30/2022] Open
Abstract
Synthetic plastics derived from fossil fuels—such as polyethylene, polypropylene, polyvinyl chloride, and polystyrene—are non-degradable. A large amount of plastic waste enters landfills and pollutes the environment. Hence, there is an urgent need to produce biodegradable plastics such as polyhydroxyalkanoates (PHAs). PHAs have garnered increasing interest as replaceable materials to conventional plastics due to their broad applicability in various purposes such as food packaging, agriculture, tissue-engineering scaffolds, and drug delivery. Based on the chain length of 3-hydroxyalkanoate repeat units, there are three types PHAs, i.e., short-chain-length (scl-PHAs, 4 to 5 carbon atoms), medium-chain-length (mcl-PHAs, 6 to 14 carbon atoms), and long-chain-length (lcl-PHAs, more than 14 carbon atoms). Previous reviews discussed the recent developments in scl-PHAs, but there are limited reviews specifically focused on the developments of mcl-PHAs. Hence, this review focused on the mcl-PHA production, using various carbon (organic/inorganic) sources and at different operation modes (continuous, batch, fed-batch, and high-cell density). This review also focused on recent developments on extraction methods of mcl-PHAs (solvent, non-solvent, enzymatic, ultrasound); physical/thermal properties (Mw, Mn, PDI, Tm, Tg, and crystallinity); applications in various fields; and their production at pilot and industrial scales in Asia, Europe, North America, and South America.
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5
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Bedade DK, Edson CB, Gross RA. Emergent Approaches to Efficient and Sustainable Polyhydroxyalkanoate Production. Molecules 2021; 26:3463. [PMID: 34200447 PMCID: PMC8201374 DOI: 10.3390/molecules26113463] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Revised: 05/25/2021] [Accepted: 05/27/2021] [Indexed: 11/16/2022] Open
Abstract
Petroleum-derived plastics dominate currently used plastic materials. These plastics are derived from finite fossil carbon sources and were not designed for recycling or biodegradation. With the ever-increasing quantities of plastic wastes entering landfills and polluting our environment, there is an urgent need for fundamental change. One component to that change is developing cost-effective plastics derived from readily renewable resources that offer chemical or biological recycling and can be designed to have properties that not only allow the replacement of current plastics but also offer new application opportunities. Polyhydroxyalkanoates (PHAs) remain a promising candidate for commodity bioplastic production, despite the many decades of efforts by academicians and industrial scientists that have not yet achieved that goal. This article focuses on defining obstacles and solutions to overcome cost-performance metrics that are not sufficiently competitive with current commodity thermoplastics. To that end, this review describes various process innovations that build on fed-batch and semi-continuous modes of operation as well as methods that lead to high cell density cultivations. Also, we discuss work to move from costly to lower cost substrates such as lignocellulose-derived hydrolysates, metabolic engineering of organisms that provide higher substrate conversion rates, the potential of halophiles to provide low-cost platforms in non-sterile environments for PHA formation, and work that uses mixed culture strategies to overcome obstacles of using waste substrates. We also describe historical problems and potential solutions to downstream processing for PHA isolation that, along with feedstock costs, have been an Achilles heel towards the realization of cost-efficient processes. Finally, future directions for efficient PHA production and relevant structural variations are discussed.
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Affiliation(s)
- Dattatray K. Bedade
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
| | - Cody B. Edson
- New York State Center for Polymer Synthesis, Department of Chemistry and Chemical Biology, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
| | - Richard A. Gross
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
- New York State Center for Polymer Synthesis, Department of Chemistry and Chemical Biology, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
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6
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Haraźna K, Cichoń E, Skibiński S, Witko T, Solarz D, Kwiecień I, Marcello E, Zimowska M, Socha R, Szefer E, Zima A, Roy I, Raftopoulos KN, Pielichowski K, Witko M, Guzik M. Physicochemical and Biological Characterisation of Diclofenac Oligomeric Poly(3-hydroxyoctanoate) Hybrids as β-TCP Ceramics Modifiers for Bone Tissue Regeneration. Int J Mol Sci 2020; 21:E9452. [PMID: 33322564 PMCID: PMC7763618 DOI: 10.3390/ijms21249452] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2020] [Revised: 12/03/2020] [Accepted: 12/09/2020] [Indexed: 12/22/2022] Open
Abstract
Nowadays, regenerative medicine faces a major challenge in providing new, functional materials that will meet the characteristics desired to replenish and grow new tissue. Therefore, this study presents new ceramic-polymer composites in which the matrix consists of tricalcium phosphates covered with blends containing a chemically bounded diclofenac with the biocompatible polymer-poly(3-hydroxyoctanoate), P(3HO). Modification of P(3HO) oligomers was confirmed by NMR, IR and XPS. Moreover, obtained oligomers and their blends were subjected to an in-depth characterisation using GPC, TGA, DSC and AFM. Furthermore, we demonstrate that the hydrophobicity and surface free energy values of blends decreased with the amount of diclofenac modified oligomers. Subsequently, the designed composites were used as a substrate for growth of the pre-osteoblast cell line (MC3T3-E1). An in vitro biocompatibility study showed that the composite with the lowest concentration of the proposed drug is within the range assumed to be non-toxic (viability above 70%). Cell proliferation was visualised using the SEM method, whereas the observation of cell penetration into the scaffold was carried out by confocal microscopy. Thus, it can be an ideal new functional bone tissue substitute, allowing not only the regeneration and restoration of the defect but also inhibiting the development of chronic inflammation.
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Affiliation(s)
- Katarzyna Haraźna
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239 Kraków, Poland; (T.W.); (M.Z.); (R.S.); (M.W.)
| | - Ewelina Cichoń
- Faculty of Materials Science and Ceramics, AGH University of Science and Technology, 30 Mickiewicza Ave., 30-059 Kraków, Poland; (E.C.); (S.S.); (A.Z.)
| | - Szymon Skibiński
- Faculty of Materials Science and Ceramics, AGH University of Science and Technology, 30 Mickiewicza Ave., 30-059 Kraków, Poland; (E.C.); (S.S.); (A.Z.)
| | - Tomasz Witko
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239 Kraków, Poland; (T.W.); (M.Z.); (R.S.); (M.W.)
| | - Daria Solarz
- Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University, Lojasiewicza 11, 30-348 Kraków, Poland;
| | - Iwona Kwiecień
- Department of Physical Chemistry and Technology of Polymers, Silesian University of Technology, M. Strzody 9, 44-100 Gliwice, Poland;
| | - Elena Marcello
- School of Life Sciences, College of Liberal Arts and Sciences, University of Westminster, New Cavendish Street, London W1W 6UW, UK;
| | - Małgorzata Zimowska
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239 Kraków, Poland; (T.W.); (M.Z.); (R.S.); (M.W.)
| | - Robert Socha
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239 Kraków, Poland; (T.W.); (M.Z.); (R.S.); (M.W.)
| | - Ewa Szefer
- Department of Chemistry and Technology of Polymers, Cracow University of Technology, Warszawska 24, 31-155 Kraków, Poland; (E.S.); (K.N.R.); (K.P.)
| | - Aneta Zima
- Faculty of Materials Science and Ceramics, AGH University of Science and Technology, 30 Mickiewicza Ave., 30-059 Kraków, Poland; (E.C.); (S.S.); (A.Z.)
| | - Ipsita Roy
- Department of Materials Science and Engineering, University of Sheffield, Broad Lane, Sheffield S3 7HQ, UK;
| | - Konstantinos N. Raftopoulos
- Department of Chemistry and Technology of Polymers, Cracow University of Technology, Warszawska 24, 31-155 Kraków, Poland; (E.S.); (K.N.R.); (K.P.)
| | - Krzysztof Pielichowski
- Department of Chemistry and Technology of Polymers, Cracow University of Technology, Warszawska 24, 31-155 Kraków, Poland; (E.S.); (K.N.R.); (K.P.)
| | - Małgorzata Witko
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239 Kraków, Poland; (T.W.); (M.Z.); (R.S.); (M.W.)
| | - Maciej Guzik
- Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Niezapominajek 8, 30-239 Kraków, Poland; (T.W.); (M.Z.); (R.S.); (M.W.)
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7
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Blunt W, Gaugler M, Collet C, Sparling R, Gapes DJ, Levin DB, Cicek N. Rheological Behavior of High Cell Density Pseudomonas putida LS46 Cultures during Production of Medium Chain Length Polyhydroxyalkanoate (PHA) Polymers. Bioengineering (Basel) 2019; 6:E93. [PMID: 31600906 PMCID: PMC6956342 DOI: 10.3390/bioengineering6040093] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Revised: 10/01/2019] [Accepted: 10/08/2019] [Indexed: 12/20/2022] Open
Abstract
The rheology of high-cell density (HCD) cultures is an important parameter for its impact on mixing and sparging, process scale-up, and downstream unit operations in bioprocess development. In this work, time-dependent rheological properties of HCD Pseudomonas putida LS46 cultures were monitored for microbial polyhydroxyalkanoate (PHA) production. As the cell density of the fed-batch cultivation increased (0 to 25 g·L-1 cell dry mass, CDM), the apparent viscosity increased nearly nine-fold throughout the fed-batch process. The medium behaved as a nearly Newtonian fluid at lower cell densities, and became increasingly shear-thinning as the cell density increased. However, shear-thickening behavior was observed at shearing rates of approximately 75 rad·s-1 or higher, and its onset increased with viscosity of the sample. The supernatant, which contained up to 9 g·L-1 soluble organic material, contributed more to the observed viscosity effect than did the presence of cells. Owing to this behavior, the oxygen transfer performance of the bioreactor, for otherwise constant operating conditions, was reduced by 50% over the cultivation time. This study has shown that the dynamic rheology of HCD cultures is an important engineering parameter that may impact the final outcome in PHA cultivations. Understanding and anticipating this behavior and its biochemical origins could be important for improving overall productivity, yield, process scalability, and the efficacy of downstream processing unit operations.
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Affiliation(s)
- Warren Blunt
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - Marc Gaugler
- Scion Research, Te Papa Tipu Innovation Park, 49 Sala Street, Private Bag 3020, Rotorua 3046, New Zealand.
| | - Christophe Collet
- Scion Research, Te Papa Tipu Innovation Park, 49 Sala Street, Private Bag 3020, Rotorua 3046, New Zealand.
| | - Richard Sparling
- Department of Microbiology, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.
| | - Daniel J Gapes
- Scion Research, Te Papa Tipu Innovation Park, 49 Sala Street, Private Bag 3020, Rotorua 3046, New Zealand.
| | - David B Levin
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - Nazim Cicek
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
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Cerrone F, Radivojevic J, Nikodinovic-Runic J, Walsh M, Kenny ST, Babu R, O’Connor KE. Novel sodium alkyl-1,3-disulfates, anionic biosurfactants produced from microbial polyesters. Colloids Surf B Biointerfaces 2019; 182:110333. [DOI: 10.1016/j.colsurfb.2019.06.062] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2019] [Revised: 06/14/2019] [Accepted: 06/26/2019] [Indexed: 12/14/2022]
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9
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Blunt W, Dartiailh C, Sparling R, Gapes DJ, Levin DB, Cicek N. Development of High Cell Density Cultivation Strategies for Improved Medium Chain Length Polyhydroxyalkanoate Productivity Using Pseudomonas putida LS46. Bioengineering (Basel) 2019; 6:bioengineering6040089. [PMID: 31561519 PMCID: PMC6956024 DOI: 10.3390/bioengineering6040089] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2019] [Revised: 09/19/2019] [Accepted: 09/24/2019] [Indexed: 11/16/2022] Open
Abstract
High cell density (HCD) fed-batch cultures are widely perceived as a requisite for high-productivity polyhydroxyalkanoate (PHA) cultivation processes. In this work, a reactive pulse feed strategy (based on real-time CO2 or dissolved oxygen (DO) measurements as feedback variables) was used to control an oxygen-limited fed-batch process for improved productivity of medium chain length (mcl-) PHAs synthesized by Pseudomonas putida LS46. Despite the onset of oxygen limitation half-way through the process (14 h post inoculation), 28.8 ± 3.9 g L−1 total biomass (with PHA content up to 61 ± 8% cell dry mass) was reliably achieved within 27 h using octanoic acid as the carbon source in a bench-scale (7 L) bioreactor operated under atmospheric conditions. This resulted in a final volumetric productivity of 0.66 ± 0.14 g L−1 h−1. Delivering carbon to the bioreactor as a continuous drip feed process (a proactive feeding strategy compared to pulse feeding) made little difference on the final volumetric productivity of 0.60 ± 0.04 g L−1 h−1. However, the drip feed strategy favored production of non-PHA residual biomass during the growth phase, while pulse feeding favored a higher rate of mcl-PHA synthesis and yield during the storage phase. Overall, it was shown that the inherent O2-limitation brought about by HCD cultures can be used as a simple and effective control strategy for mcl-PHA synthesis from fatty acids. Furthermore, the pulse feed strategy appears to be a relatively easy and reliable method for rapid optimization of fed-batch processes, particularly when using toxic substrates like octanoic acid.
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Affiliation(s)
- Warren Blunt
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - Christopher Dartiailh
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - Richard Sparling
- Department of Microbiology, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.
| | - Daniel J Gapes
- Scion Research, Te Papa Tipu Innovation Park, Sala Street, Private Bag 3020, Rotorua 3046, New Zealand.
| | - David B Levin
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - Nazim Cicek
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
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10
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Blunt W, Levin DB, Cicek N. Bioreactor Operating Strategies for Improved Polyhydroxyalkanoate (PHA) Productivity. Polymers (Basel) 2018; 10:polym10111197. [PMID: 30961122 PMCID: PMC6290639 DOI: 10.3390/polym10111197] [Citation(s) in RCA: 43] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Revised: 10/22/2018] [Accepted: 10/23/2018] [Indexed: 12/02/2022] Open
Abstract
Microbial polyhydroxyalkanoates (PHAs) are promising biodegradable polymers that may alleviate some of the environmental burden of petroleum-derived polymers. The requirements for carbon substrates and energy for bioreactor operations are major factors contributing to the high production costs and environmental impact of PHAs. Improving the process productivity is an important aspect of cost reduction, which has been attempted using a variety of fed-batch, continuous, and semi-continuous bioreactor systems, with variable results. The purpose of this review is to summarize the bioreactor operations targeting high PHA productivity using pure cultures. The highest volumetric PHA productivity was reported more than 20 years ago for poly(3-hydroxybutryate) (PHB) production from sucrose (5.1 g L−1 h−1). In the time since, similar results have not been achieved on a scale of more than 100 L. More recently, a number fed-batch and semi-continuous (cyclic) bioreactor operation strategies have reported reasonably high productivities (1 g L−1 h−1 to 2 g L−1 h−1) under more realistic conditions for pilot or industrial-scale production, including the utilization of lower-cost waste carbon substrates and atmospheric air as the aeration medium, as well as cultivation under non-sterile conditions. Little development has occurred in the area of fully continuously fed bioreactor systems over the last eight years.
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Affiliation(s)
- Warren Blunt
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - David B Levin
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
| | - Nazim Cicek
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada.
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11
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The role of dissolved oxygen content as a modulator of microbial polyhydroxyalkanoate synthesis. World J Microbiol Biotechnol 2018; 34:106. [DOI: 10.1007/s11274-018-2488-6] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2018] [Accepted: 06/18/2018] [Indexed: 10/28/2022]
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12
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Kangwa M, Yelemane V, Polat AN, Gorrepati KDD, Grasselli M, Fernández-Lahore M. High-level fed-batch fermentative expression of an engineered Staphylococcal protein A based ligand in E. coli: purification and characterization. AMB Express 2015; 5:70. [PMID: 26556030 PMCID: PMC4641145 DOI: 10.1186/s13568-015-0155-y] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2015] [Accepted: 10/22/2015] [Indexed: 11/24/2022] Open
Abstract
The major platform for high level recombinant protein production is based on genetically modified microorganisms like Escherichia coli (E. coli) due to its short dividing time, ability to use inexpensive substrates and additionally, its genetics is comparatively simple, well characterized and can be manipulated easily. Here, we investigated the possibilities of finding the best media for high cell density fermentation, by analyzing different media samples, focusing on improving fermentation techniques and recombinant protein production. Initial fermentation of E. coli BL21 DE3:pAV01 in baffled flasks showed that high cell density was achieved when using complex media, Luria–Bertani (LB) and Terrific medium broth (TB) (10 and 14 g/L wet weight, respectively), as compared to mineral media M9, modified minimal medium (MMM) and Riesenberg mineral medium (RM) (7, 8 and 7 g/L, respectively). However, in fed-batch fermentation processes when using MMM after 25 h cultivation, it was possible to yield an optical density (OD600) of 139 corresponding to 172 g/L of wet biomass was produced in a 30 L TV Techfors-S Infors HT fermenter, with a computer controlled nutrient supply (glucose as a carbon source) delivery system, indicating nearly 1.5 times that obtained from TB. Upon purification, a total of 1.65 mg/g of protein per gram cell biomass was obtained and the purified AviPure showed affinity for immunoglobulin. High cell density fed batch fermentation was achieved by selecting the best media and growth conditions, by utilizing a number of fermentation parameters like media, fermentation conditions, chemical concentrations, pO2 level, stirrer speed, pH level and feed media addition. It is possible to reach cell densities higher than shake flasks and stirred tank reactors with the improved oxygen transfer rate and feed.
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Cerrone F, Davis R, Kenny ST, Woods T, O'Donovan A, Gupta VK, Tuohy M, Babu RP, O'Kiely P, O'Connor K. Use of a mannitol rich ensiled grass press juice (EGPJ) as a sole carbon source for polyhydroxyalkanoates (PHAs) production through high cell density cultivation. BIORESOURCE TECHNOLOGY 2015; 191:45-52. [PMID: 25978856 DOI: 10.1016/j.biortech.2015.04.128] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2015] [Revised: 04/29/2015] [Accepted: 04/30/2015] [Indexed: 06/04/2023]
Abstract
This study demonstrates the use of a mannitol rich ensiled grass press juice (EGPJ) as a renewable carbon substrate for polyhydroxyalkanoates (PHA) production in shaking flask experiments and fed-batch stirred tank reactor cultivations. Fed-batch cultivations of Burkholderia sacchari IPT101 using EGPJ as sole carbon source produced 44.5 g/L CDW containing 33% polyhydroxybutyrate (PHB) in 36 h, while Pseudomonas chlororaphis IMD555 produced a CDW of 37 g/L containing 10% of medium chain length polyhydroxyalkanoates (mcl-PHA) in 34 h. PHB and mcl-PHA extracted from B. sacchari IPT101 and P. chlororaphis IMD555, grown on EGPJ, had a molecular weight of 548 kg/mol and 115.4 kg/mol, respectively. While mcl-PHA can be produced from EGPJ, PHB production is more interesting as there is a 4-fold higher volumetric productivity compared to mcl-PHA.
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Affiliation(s)
- Federico Cerrone
- School of Biomolecular and Biomedical Sciences, University College Dublin, Belfield, Dublin 4, Ireland; Earth Institute, University College Dublin, Belfield, Dublin 4, Ireland; Technology Centre for Biorefining and Bioenergy, Orbsen Building, NUIG, Galway, Ireland
| | - Reeta Davis
- Earth Institute, University College Dublin, Belfield, Dublin 4, Ireland; Technology Centre for Biorefining and Bioenergy, Orbsen Building, NUIG, Galway, Ireland; Centre for Research on Adaptive Nanostructure and Nanodevices, Trinity College Dublin, Dublin 2, Ireland
| | - Shane T Kenny
- School of Biomolecular and Biomedical Sciences, University College Dublin, Belfield, Dublin 4, Ireland; Earth Institute, University College Dublin, Belfield, Dublin 4, Ireland
| | - Trevor Woods
- Centre for Research on Adaptive Nanostructure and Nanodevices, Trinity College Dublin, Dublin 2, Ireland; School of Physics, Trinity College Dublin, Dublin 2, Ireland
| | - Anthonia O'Donovan
- Molecular Glycobiotechnology Group, Biochemistry, School of Natural Sciences, National University of Ireland, Galway, Ireland
| | - Vijai Kumar Gupta
- Molecular Glycobiotechnology Group, Biochemistry, School of Natural Sciences, National University of Ireland, Galway, Ireland
| | - Maria Tuohy
- Molecular Glycobiotechnology Group, Biochemistry, School of Natural Sciences, National University of Ireland, Galway, Ireland
| | - Ramesh P Babu
- Technology Centre for Biorefining and Bioenergy, Orbsen Building, NUIG, Galway, Ireland; Centre for Research on Adaptive Nanostructure and Nanodevices, Trinity College Dublin, Dublin 2, Ireland; School of Physics, Trinity College Dublin, Dublin 2, Ireland
| | - Padraig O'Kiely
- Animal & Grassland Research and Innovation Centre, Teagasc, Grange, Dunsany, Co. Meath, Ireland
| | - Kevin O'Connor
- School of Biomolecular and Biomedical Sciences, University College Dublin, Belfield, Dublin 4, Ireland; Earth Institute, University College Dublin, Belfield, Dublin 4, Ireland; Technology Centre for Biorefining and Bioenergy, Orbsen Building, NUIG, Galway, Ireland.
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Influence of Feeding and Controlled Dissolved Oxygen Level on the Production of Poly(3-Hydroxybutyrate-co-3-Hydroxyvalerate) Copolymer by Cupriavidus sp. USMAA2-4 and Its Characterization. Appl Biochem Biotechnol 2015; 176:1315-34. [DOI: 10.1007/s12010-015-1648-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2015] [Accepted: 04/21/2015] [Indexed: 10/23/2022]
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