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Súnico V, Piunti I, Bhattacharjee M, Mezzetti B, Caballero JL, Muñoz-Blanco J, Ricci A, Sabbadini S. Overview on Current Selectable Marker Systems and Novel Marker Free Approaches in Fruit Tree Genetic Engineering. Int J Mol Sci 2024; 25:11902. [PMID: 39595971 PMCID: PMC11594270 DOI: 10.3390/ijms252211902] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2024] [Revised: 10/31/2024] [Accepted: 11/02/2024] [Indexed: 11/28/2024] Open
Abstract
Selectable marker genes are useful for recognizing which cells have integrated specific sequences in their genome after genetic transformation processes. They are especially important for fruit trees genetic transformation to individuate putatively genetically modified events, because most of the protocols used to genetic engineer these species are often unsuccessful or with low efficiency. Traditional selectable marker genes, mainly of bacterial origin, confer antibiotics/herbicides-resistance or metabolic advantages to transformed cells. Genes that allow the visual recognition of engineered tissues without using any selective agent, such as morphogenic regulators and reporter genes, are also used as selection tools to in vitro identify genetically modified regenerated lines. As final step, genetic engineered plants should be tested in field conditions, where selectable marker genes are no longer necessary, and strongly unpopular especially for the commercial development of the new products. Thus, different approaches, mainly based on the use of site-specific recombinases and/or editing nucleases, are being now used to recover marker-free fruit crops. This review describes and comments the most used and suitable selection tools of interest, particularly for fruit tree genetic engineering. Lastly, a spotlight highlights the biosafety aspects related to the use of selectable marker genes exploited for fruit species genetic engineering.
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Affiliation(s)
- Victoria Súnico
- Department of Agricultural, Food, and Environmental Sciences, Marche Polytechnic University, 60131 Ancona, Italy; (V.S.); (I.P.); (B.M.)
- Plant Biotechnology and Pharmacognosy Research Group (BIO-278), Department of Biochemistry and Molecular Biology, Severo Ochoa Building-C6, University of Cordoba, UCO-CeiA3, 14071 Cordoba, Spain; (J.L.C.); (J.M.-B.)
| | - Irene Piunti
- Department of Agricultural, Food, and Environmental Sciences, Marche Polytechnic University, 60131 Ancona, Italy; (V.S.); (I.P.); (B.M.)
| | - Mamta Bhattacharjee
- DBT-NECAB, Department of Agricultural Biotechnology, Assam Agricultural University, Jorhat 785013, Assam, India;
| | - Bruno Mezzetti
- Department of Agricultural, Food, and Environmental Sciences, Marche Polytechnic University, 60131 Ancona, Italy; (V.S.); (I.P.); (B.M.)
| | - José L. Caballero
- Plant Biotechnology and Pharmacognosy Research Group (BIO-278), Department of Biochemistry and Molecular Biology, Severo Ochoa Building-C6, University of Cordoba, UCO-CeiA3, 14071 Cordoba, Spain; (J.L.C.); (J.M.-B.)
| | - Juan Muñoz-Blanco
- Plant Biotechnology and Pharmacognosy Research Group (BIO-278), Department of Biochemistry and Molecular Biology, Severo Ochoa Building-C6, University of Cordoba, UCO-CeiA3, 14071 Cordoba, Spain; (J.L.C.); (J.M.-B.)
| | - Angela Ricci
- Department of Agricultural, Food, and Environmental Sciences, Marche Polytechnic University, 60131 Ancona, Italy; (V.S.); (I.P.); (B.M.)
| | - Silvia Sabbadini
- Department of Agricultural, Food, and Environmental Sciences, Marche Polytechnic University, 60131 Ancona, Italy; (V.S.); (I.P.); (B.M.)
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Ye X, Vaghchhipawala Z, Williams EJ, Fu C, Liu J, Lu F, Hall EL, Guo SX, Frank L, Gilbertson LA. Cre-mediated autoexcision of selectable marker genes in soybean, cotton, canola and maize transgenic plants. PLANT CELL REPORTS 2023; 42:45-55. [PMID: 36316413 DOI: 10.1007/s00299-022-02935-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Accepted: 10/10/2022] [Indexed: 06/16/2023]
Abstract
Efficient selectable marker gene autoexcision in transgenic plants of soybean, cotton, canola, and maize is achieved by effective Cre recombinase expression. Selectable marker genes are often required for efficient generation of transgenic plants in plant transformation but are not desired once the transgenic events are obtained. We have developed Cre/loxP autoexcision systems to remove selectable marker genes in soybean, cotton, canola and maize. We tested a set of vectors with diverse promoters and identified promising promoters to drive cre expression for each of the four crops. We evaluated both the efficiency of generating primary transgenic events with low transgene copy numbers, and the frequency of marker-free progeny in the next generation. The best performing vectors gave no obvious decrease in the transformation frequency in each crop and generated homozygous marker-free progeny in the next generation. We found that effective expression of Cre recombinase for marker gene autoexcision can be species dependent. Among the vectors tested, the best autoexcision frequency (41%) in soybean transformation came from using the soybean RSP1 promoter for cre expression. The cre gene expressed by soybean RSP1 promoter with an Arabidopsis AtpE intron delivered the best autoexcision frequency (69%) in cotton transformation. The cre gene expressed by the embryo-specific eUSP88 promoter from Vicia faba conferred the best marker excision frequency (32%) in canola transformation. Finally, the cre gene expressed by the rice CDC45-1 promoter resulted in 44% autoexcision in maize transformation. The Cre/loxP recombinase system enables the generation of selectable marker-free transgenic plants for commercial product development in four agriculturally important crops and provides further improvement opportunities for more specific and better marker excision efficiency.
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Affiliation(s)
- Xudong Ye
- Bayer Crop Science, 700 Chesterfield Pkwy, St. Louis, MO, 63017, USA.
| | | | - Edward J Williams
- Bayer Crop Science, 700 Chesterfield Pkwy, St. Louis, MO, 63017, USA
- Wisconsin Crop Innovation Center, 8520 University Green, Middleton, WI, 53562, USA
| | - Changlin Fu
- Bayer Crop Science, 700 Chesterfield Pkwy, St. Louis, MO, 63017, USA
| | - Jinyuan Liu
- Bayer Crop Science, 700 Chesterfield Pkwy, St. Louis, MO, 63017, USA
| | - Fengming Lu
- Bayer Crop Science, 700 Chesterfield Pkwy, St. Louis, MO, 63017, USA
| | - Erin L Hall
- Bayer Crop Science, 700 Chesterfield Pkwy, St. Louis, MO, 63017, USA
| | - Shirley X Guo
- Bayer Crop Science, 700 Chesterfield Pkwy, St. Louis, MO, 63017, USA
| | - LaRee Frank
- Bayer Crop Science, 700 Chesterfield Pkwy, St. Louis, MO, 63017, USA
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Salonia F, Ciacciulli A, Pappalardo HD, Poles L, Pindo M, Larger S, Caruso P, Caruso M, Licciardello C. A dual sgRNA-directed CRISPR/Cas9 construct for editing the fruit-specific β-cyclase 2 gene in pigmented citrus fruits. FRONTIERS IN PLANT SCIENCE 2022; 13:975917. [PMID: 36582639 PMCID: PMC9792771 DOI: 10.3389/fpls.2022.975917] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Accepted: 10/13/2022] [Indexed: 06/17/2023]
Abstract
CRISPR/Cas9 genome editing is a modern biotechnological approach used to improve plant varieties, modifying only one or a few traits of a specific variety. However, this technology cannot be easily used to improve fruit quality traits in citrus, due to the lack of knowledge of key genes, long juvenile stage, and the difficulty regenerating whole plants of specific varieties. Here, we introduce a genome editing approach with the aim of producing citrus plantlets whose fruits contain both lycopene and anthocyanins. Our method employs a dual single guide RNA (sgRNA)-directed genome editing approach to knockout the fruit-specific β-cyclase 2 gene, responsible for the conversion of lycopene to beta-carotene. The gene is targeted by two sgRNAs simultaneously to create a large deletion, as well as to induce point mutations in both sgRNA targets. The EHA105 strain of Agrobacterium tumefaciens was used to transform five different anthocyanin-pigmented sweet oranges, belonging to the Tarocco and Sanguigno varietal groups, and 'Carrizo' citrange, a citrus rootstock as a model for citrus transformation. Among 58 plantlets sequenced in the target region, 86% of them were successfully edited. The most frequent mutations were deletions (from -1 to -74 nucleotides) and insertions (+1 nucleotide). Moreover, a novel event was identified in six plantlets, consisting of the inversion of the region between the two sgRNAs. For 20 plantlets in which a single mutation occurred, we excluded chimeric events. Plantlets did not show an altered phenotype in vegetative tissues. To the best of our knowledge, this work represents the first example of the use of a genome editing approach to potentially improve qualitative traits of citrus fruit.
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Affiliation(s)
- Fabrizio Salonia
- Council for Agricultural Research and Economics (CREA) - Research Centre for Olive, Fruit and Citrus Crops, Acireale, Italy
- Department of Agriculture, Food and Environment (Di3A), University of Catania, Catania, Italy
| | - Angelo Ciacciulli
- Council for Agricultural Research and Economics (CREA) - Research Centre for Olive, Fruit and Citrus Crops, Acireale, Italy
| | - Helena Domenica Pappalardo
- Council for Agricultural Research and Economics (CREA) - Research Centre for Olive, Fruit and Citrus Crops, Acireale, Italy
| | - Lara Poles
- Council for Agricultural Research and Economics (CREA) - Research Centre for Olive, Fruit and Citrus Crops, Acireale, Italy
- Department of Agriculture, Food and Environment (Di3A), University of Catania, Catania, Italy
| | - Massimo Pindo
- Research and Innovation Centre, Trento with S. Michele all’ Adige, Trento, Italy
| | - Simone Larger
- Research and Innovation Centre, Trento with S. Michele all’ Adige, Trento, Italy
| | - Paola Caruso
- Council for Agricultural Research and Economics (CREA) - Research Centre for Olive, Fruit and Citrus Crops, Acireale, Italy
| | - Marco Caruso
- Council for Agricultural Research and Economics (CREA) - Research Centre for Olive, Fruit and Citrus Crops, Acireale, Italy
| | - Concetta Licciardello
- Council for Agricultural Research and Economics (CREA) - Research Centre for Olive, Fruit and Citrus Crops, Acireale, Italy
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Ren H, Yin A, Wu P, Zhou H, Zhou J, Yu Y, Lu H. Establishment of a Cre-loxP System Based on a Leaky LAC4 Promoter and an Unstable panARS Element in Kluyveromyces marxianus. Microorganisms 2022; 10:microorganisms10061240. [PMID: 35744758 PMCID: PMC9227491 DOI: 10.3390/microorganisms10061240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Revised: 06/12/2022] [Accepted: 06/15/2022] [Indexed: 02/01/2023] Open
Abstract
The Cre-loxP system produces structural variations, such as deletion, duplication, inversion and translocation, at specific loci and induces chromosomal rearrangements in the genome. To achieve chromosomal rearrangements in Kluyveromyces marxianus, the positions and sequences of centromeres were identified in this species for the first time. Next, a Cre-loxP system was established in K. marxianus. In this system, the Cre recombinase was expressed from a leaky LAC4 promoter in a plasmid to alleviate the cytotoxicity of Cre, and the unstable plasmid contained a panARS element to facilitate the clearance of the plasmid from the cells. By using LAC4 as a reporter gene, the recombination frequencies between loxP sites or loxPsym sites were 99% and 73%, respectively. A K. marxianus strain containing 16 loxPsym sites in the genome was constructed. The recombination frequency of large-scale chromosomal rearrangements between 16 loxPsym sites was up to 38.9%. Our study provides valuable information and tools for studying chromosomal structures and functions in K. marxianus.
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Affiliation(s)
- Haiyan Ren
- State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai 200438, China; (H.R.); (A.Y.); (P.W.); (H.Z.); (J.Z.)
- Shanghai Engineering Research Center of Industrial Microorganisms, Shanghai 200438, China
| | - Anqi Yin
- State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai 200438, China; (H.R.); (A.Y.); (P.W.); (H.Z.); (J.Z.)
- Shanghai Engineering Research Center of Industrial Microorganisms, Shanghai 200438, China
| | - Pingping Wu
- State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai 200438, China; (H.R.); (A.Y.); (P.W.); (H.Z.); (J.Z.)
- Shanghai Engineering Research Center of Industrial Microorganisms, Shanghai 200438, China
| | - Huanyu Zhou
- State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai 200438, China; (H.R.); (A.Y.); (P.W.); (H.Z.); (J.Z.)
- Shanghai Engineering Research Center of Industrial Microorganisms, Shanghai 200438, China
| | - Jungang Zhou
- State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai 200438, China; (H.R.); (A.Y.); (P.W.); (H.Z.); (J.Z.)
- Shanghai Engineering Research Center of Industrial Microorganisms, Shanghai 200438, China
| | - Yao Yu
- State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai 200438, China; (H.R.); (A.Y.); (P.W.); (H.Z.); (J.Z.)
- Shanghai Engineering Research Center of Industrial Microorganisms, Shanghai 200438, China
- National Technology Innovation Center of Synthetic Biology, Tianjin 300308, China
- Correspondence: (Y.Y.); (H.L.)
| | - Hong Lu
- State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai 200438, China; (H.R.); (A.Y.); (P.W.); (H.Z.); (J.Z.)
- Shanghai Engineering Research Center of Industrial Microorganisms, Shanghai 200438, China
- National Technology Innovation Center of Synthetic Biology, Tianjin 300308, China
- Shanghai Collaborative Innovation Center for Biomanufacturing Technology, Shanghai 200237, China
- Correspondence: (Y.Y.); (H.L.)
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Conti G, Xoconostle-Cázares B, Marcelino-Pérez G, Hopp HE, Reyes CA. Citrus Genetic Transformation: An Overview of the Current Strategies and Insights on the New Emerging Technologies. FRONTIERS IN PLANT SCIENCE 2021; 12:768197. [PMID: 34917104 PMCID: PMC8670418 DOI: 10.3389/fpls.2021.768197] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Accepted: 10/14/2021] [Indexed: 05/04/2023]
Abstract
Citrus are among the most prevailing fruit crops produced worldwide. The implementation of effective and reliable breeding programs is essential for coping with the increasing demands of satisfactory yield and quality of the fruit as well as to deal with the negative impact of fast-spreading diseases. Conventional methods are time-consuming and of difficult application because of inherent factors of citrus biology, such as their prolonged juvenile period and a complex reproductive stage, sometimes presenting infertility, self-incompatibility, parthenocarpy, or polyembryony. Moreover, certain desirable traits are absent from cultivated or wild citrus genotypes. All these features are challenging for the incorporation of the desirable traits. In this regard, genetic engineering technologies offer a series of alternative approaches that allow overcoming the difficulties of conventional breeding programs. This review gives a detailed overview of the currently used strategies for the development of genetically modified citrus. We describe different aspects regarding genotype varieties used, including elite cultivars or extensively used scions and rootstocks. Furthermore, we discuss technical aspects of citrus genetic transformation procedures via Agrobacterium, regular physical methods, and magnetofection. Finally, we describe the selection of explants considering young and mature tissues, protoplast isolation, etc. We also address current protocols and novel approaches for improving the in vitro regeneration process, which is an important bottleneck for citrus genetic transformation. This review also explores alternative emerging transformation strategies applied to citrus species such as transient and tissue localized transformation. New breeding technologies, including cisgenesis, intragenesis, and genome editing by clustered regularly interspaced short palindromic repeats (CRISPR), are also discussed. Other relevant aspects comprising new promoters and reporter genes, marker-free systems, and strategies for induction of early flowering, are also addressed. We provided a future perspective on the use of current and new technologies in citrus and its potential impact on regulatory processes.
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Affiliation(s)
- Gabriela Conti
- Instituto de Agrobiotecnología y Biología Molecular, UEDD INTA-CONICET, Hurlingham, Argentina
- Cátedra de Genética, Universidad de Buenos Aires, Buenos Aires, Argentina
| | - Beatriz Xoconostle-Cázares
- Departamento de Biotecnología y Bioingeniería, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Mexico City, Mexico
| | - Gabriel Marcelino-Pérez
- Departamento de Biotecnología y Bioingeniería, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Mexico City, Mexico
| | - Horacio Esteban Hopp
- Instituto de Agrobiotecnología y Biología Molecular, UEDD INTA-CONICET, Hurlingham, Argentina
- Laboratorio de Agrobiotecnología, Facultad de Ciencias Exactas y Naturales, Departamento de Fisiología, Biología Molecular y Celular (FBMC), Universidad de Buenos Aires, Buenos Aires, Argentina
| | - Carina A. Reyes
- Instituto de Biotecnología y Biología Molecular, CCT-La Plata, CONICET-UNLP, Buenos Aires, Argentina
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Pyramiding the antimicrobial PR1aCB and AATCB genes in 'Tarocco' blood orange (Citrus sinensis Osbeck) to enhance citrus canker resistance. Transgenic Res 2021; 30:635-647. [PMID: 34076822 DOI: 10.1007/s11248-021-00245-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Accepted: 03/17/2021] [Indexed: 01/14/2023]
Abstract
Citrus canker, caused by Xanthomonas citri subsp. citri (Xcc), is a major bacterial disease responsible for substantial economic losses in citrus-producing areas. To breed transgenic citrus plants with enhanced resistance to citrus canker, two antimicrobial peptide genes, PR1aCB and AATCB, were incorporated into 'Tarocco' blood orange (Citrus sinensis Osbeck) plants via co-transformation and sequential re-transformation. The presence of PR1aCB and AATCB in double transgenic plants was confirmed by PCR. The expression of PR1aCB and AATCB in double transformants was demonstrated by quantitative real-time PCR. An in vivo disease resistance assay involving the injection of Xcc revealed that the double transformants were more resistant to citrus canker than the single gene transformants and wild-type plants. An analysis of the bacterial population indicated that the enhanced citrus canker resistance of the double transformants was due to inhibited Xcc growth. These results proved that the pyramiding of multiple genes is a more effective strategy for increasing the disease resistance of transgenic citrus plants than single gene transformations.
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Zou X, Du M, Liu Y, Wu L, Xu L, Long Q, Peng A, He Y, Andrade M, Chen S. CsLOB1 regulates susceptibility to citrus canker through promoting cell proliferation in citrus. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 106:1039-1057. [PMID: 33754403 DOI: 10.1111/tpj.15217] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 02/18/2021] [Accepted: 02/23/2021] [Indexed: 05/25/2023]
Abstract
Citrus sinensis lateral organ boundary 1 (CsLOB1) was previously identified as a critical disease susceptibility gene for citrus bacterial canker, which is caused by Xanthomonas citri subsp. citri (Xcc). However, the molecular mechanisms of CsLOB1 in citrus response to Xcc are still elusive. Here, we constructed transgenic plants overexpressing and RNAi-silencing of CsLOB1 using the canker-disease susceptible 'wanjincheng' orange (C. sinensis Osbeck) as explants. CsLOB1-overexpressing plants exhibited dwarf phenotypes with smaller and thicker leaf, increased branches and adventitious buds clustered on stems. These phenotypes were followed by a process of pustule- and canker-like development that exhibited enhanced cell proliferation. Pectin depolymerization and expansin accumulation were enhanced by CsLOB1 overexpression, while cellulose and hemicellulose synthesis were increased by CsLOB1 silence. Whilst overexpression of CsLOB1 increased susceptibility, RNAi-silencing of CsLOB1 enhanced resistance to canker disease without impairing pathogen entry. Transcriptome analysis revealed that CsLOB1 positively regulated cell wall degradation and modification processes, cytokinin metabolism, and cell division. Additionally, 565 CsLOB1-targeted genes were identified in chromatin immunoprecipitation-sequencing (ChIP-seq) experiments. Motif discovery analysis revealed that the most highly overrepresented binding sites had a conserved 6-bp 'GCGGCG' consensus DNA motif. RNA-seq and ChIP-seq data suggested that CsLOB1 directly activates the expression of four genes involved in cell wall remodeling, and three genes that participate in cytokinin and brassinosteroid hormone pathways. Our findings indicate that CsLOB1 promotes cell proliferation by mechanisms depending on cell wall remodeling and phytohormone signaling, which may be critical to citrus canker development and bacterial growth in citrus.
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Affiliation(s)
- Xiuping Zou
- Citrus Research Institute, Chinese Academy of Agricultural Sciences/Southwest University, Chongqing, 400712, P. R. China
| | - Meixia Du
- Citrus Research Institute, Chinese Academy of Agricultural Sciences/Southwest University, Chongqing, 400712, P. R. China
| | - Yunuo Liu
- Citrus Research Institute, Chinese Academy of Agricultural Sciences/Southwest University, Chongqing, 400712, P. R. China
| | - Liu Wu
- Citrus Research Institute, Chinese Academy of Agricultural Sciences/Southwest University, Chongqing, 400712, P. R. China
| | - Lanzhen Xu
- Citrus Research Institute, Chinese Academy of Agricultural Sciences/Southwest University, Chongqing, 400712, P. R. China
| | - Qin Long
- Citrus Research Institute, Chinese Academy of Agricultural Sciences/Southwest University, Chongqing, 400712, P. R. China
| | - Aihong Peng
- Citrus Research Institute, Chinese Academy of Agricultural Sciences/Southwest University, Chongqing, 400712, P. R. China
| | - Yongrui He
- Citrus Research Institute, Chinese Academy of Agricultural Sciences/Southwest University, Chongqing, 400712, P. R. China
| | - Maxuel Andrade
- Brazilian Biosciences National Laboratory (LNBio), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, SP, Brazil
| | - Shanchun Chen
- Citrus Research Institute, Chinese Academy of Agricultural Sciences/Southwest University, Chongqing, 400712, P. R. China
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Bowman KD, McCollum G, Albrecht U. SuperSour: A New Strategy for Breeding Superior Citrus Rootstocks. FRONTIERS IN PLANT SCIENCE 2021; 12:741009. [PMID: 34804088 PMCID: PMC8600239 DOI: 10.3389/fpls.2021.741009] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Accepted: 10/14/2021] [Indexed: 05/02/2023]
Abstract
Citrus crops have a long history of cultivation as grafted trees on selected rootstock cultivars, but all current rootstocks have significant limitations and traditional methods of rootstock breeding take at least 2-3 decades to develop and field test new rootstocks. Citrus production in the United States, and other parts of the world, is impaired by a wide range of biotic and abiotic problems, with especially severe damage caused by the disease huanglongbing (HLB) associated with Candidatus Liberibacter asiaticus. All major commercial citrus scion cultivars are damaged by HLB, but tree tolerance is significantly improved by some rootstocks. To overcome these challenges, the USDA citrus breeding program has implemented a multi-pronged strategy for rootstock breeding that expands the diversity of germplasm utilized in rootstock breeding, significantly increases the number of new hybrids evaluated concurrently, and greatly reduces the time from cross to potential cultivar release. We describe the key components and methodologies of this new strategy, termed "SuperSour," along with reference to the historical favorite rootstock sour orange (Citrus aurantium), and previous methods employed in citrus rootstock breeding. Rootstock propagation by cuttings and tissue culture is one key to the new strategy, and by avoiding the need for nucellar seeds, eliminates the 6- to 15-year delay in testing while waiting for new hybrids to fruit. In addition, avoiding selection of parents and progeny based on nucellar polyembryony vastly expands the potential genepool for use in rootstock improvement. Fifteen new field trials with more than 350 new hybrid rootstocks have been established under the SuperSour strategy in the last 8 years. Detailed multi-year performance data from the trials will be used to identify superior rootstocks for commercial release, and to map important traits and develop molecular markers for the next generation of rootstock development. Results from two of these multi-year replicated field trials with sweet orange scion are presented to illustrate performance of 97 new hybrid rootstocks relative to four commercial rootstocks. Through the first 7 years in the field with endemic HLB, many of the new SuperSour hybrid rootstocks exhibit greatly superior fruit yield, yield efficiency, canopy health, and fruit quality, as compared with the standard rootstocks included in the trials.
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Affiliation(s)
- Kim D. Bowman
- U.S. Horticultural Research Laboratory, Agricultural Research Service, United States Department of Agriculture, Ft. Pierce, FL, United States
- *Correspondence: Kim D. Bowman,
| | - Greg McCollum
- U.S. Horticultural Research Laboratory, Agricultural Research Service, United States Department of Agriculture, Ft. Pierce, FL, United States
| | - Ute Albrecht
- Southwest Florida Research and Education Center, Horticultural Sciences Department, Institute of Food and Agricultural Sciences, University of Florida, Immokalee, FL, United States
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In vitro plant regeneration and Agrobacterium-mediated genetic transformation of a carnivorous plant, Nepenthes mirabilis. Sci Rep 2020; 10:17482. [PMID: 33060701 PMCID: PMC7566609 DOI: 10.1038/s41598-020-74108-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Accepted: 08/25/2020] [Indexed: 12/28/2022] Open
Abstract
In nutrient-poor habitats, carnivorous plants have developed novel feeding strategies based on the capture and digestion of prey and the assimilation of prey-derived nutrients by specialized traps. The Nepenthes genus, comprising nearly 160 species, presents a remarkable pitcher-shaped trap, leading to great interest among biologists, but the species of this genus are listed as threatened. In this work, we developed a protocol for reproducing Nepenthes mirabilis through shoot regeneration from calli. The cultivation of stem segments of N. mirabilis on MS medium containing thidiazuron induced organogenic calli after 10 weeks. Subcultured calli exposed to 6-benzylaminopurine showed shoot regeneration in 3 weeks with considerable yields (143 shoots/g of calli). Excised shoots transferred to medium with indole-3-butyric acid allowed rooting in 4 weeks, and rooted plantlets had a 100% survival rate. Based on this method, we also developed an Agrobacterium-mediated genetic transformation protocol using calli as explants and ipt as a positive method of selection. Twelve weeks post infection, regenerated shoots were observed at the surface of calli. Their transgenic status was confirmed by PCR and RT-PCR. In conclusion, this study provides an efficient method for regenerating Nepenthes and the first protocol for its stable genetic transformation, a new tool for studying carnivory.
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Poles L, Licciardello C, Distefano G, Nicolosi E, Gentile A, La Malfa S. Recent Advances of In Vitro Culture for the Application of New Breeding Techniques in Citrus. PLANTS (BASEL, SWITZERLAND) 2020; 9:E938. [PMID: 32722179 PMCID: PMC7465985 DOI: 10.3390/plants9080938] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/06/2020] [Revised: 07/21/2020] [Accepted: 07/22/2020] [Indexed: 12/15/2022]
Abstract
Citrus is one of the most important fruit crops in the world. This review will discuss the recent findings related to citrus transformation and regeneration protocols of juvenile and adult explants. Despite the many advances that have been made in the last years (including the use of inducible promoters and site-specific recombination systems), transformation efficiency, and regeneration potential still represent a bottleneck in the application of the new breeding techniques in commercial citrus varieties. The influence of genotype, explant type, and other factors affecting the regeneration and transformation of the most used citrus varieties will be described, as well as some examples of how these processes can be applied to improve fruit quality and resistance to various pathogens and pests, including the potential of using genome editing in citrus. The availability of efficient regeneration and transformation protocols, together with the availability of the source of resistance, is made even more important in light of the fast diffusion of emerging diseases, such as Huanglongbing (HLB), which is seriously challenging citriculture worldwide.
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Affiliation(s)
- Lara Poles
- Food and Environment (Di3A), Department of Agriculture, University of Catania, Via Valdisavoia 5, 95123 Catania, Italy; (L.P.); (G.D.); (E.N.); (S.L.M.)
- CREA, Research Centre for Olive, Fruit and Citrus Crops, Corso Savoia 190, 95024 Acireale, Italy;
| | - Concetta Licciardello
- CREA, Research Centre for Olive, Fruit and Citrus Crops, Corso Savoia 190, 95024 Acireale, Italy;
| | - Gaetano Distefano
- Food and Environment (Di3A), Department of Agriculture, University of Catania, Via Valdisavoia 5, 95123 Catania, Italy; (L.P.); (G.D.); (E.N.); (S.L.M.)
| | - Elisabetta Nicolosi
- Food and Environment (Di3A), Department of Agriculture, University of Catania, Via Valdisavoia 5, 95123 Catania, Italy; (L.P.); (G.D.); (E.N.); (S.L.M.)
| | - Alessandra Gentile
- Food and Environment (Di3A), Department of Agriculture, University of Catania, Via Valdisavoia 5, 95123 Catania, Italy; (L.P.); (G.D.); (E.N.); (S.L.M.)
- College of Horticulture and Landscape, Hunan Agricultural University, Changsha 410128, China
| | - Stefano La Malfa
- Food and Environment (Di3A), Department of Agriculture, University of Catania, Via Valdisavoia 5, 95123 Catania, Italy; (L.P.); (G.D.); (E.N.); (S.L.M.)
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Salonia F, Ciacciulli A, Poles L, Pappalardo HD, La Malfa S, Licciardello C. New Plant Breeding Techniques in Citrus for the Improvement of Important Agronomic Traits. A Review. FRONTIERS IN PLANT SCIENCE 2020; 11:1234. [PMID: 32922420 PMCID: PMC7456868 DOI: 10.3389/fpls.2020.01234] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2020] [Accepted: 07/28/2020] [Indexed: 05/18/2023]
Abstract
New plant breeding techniques (NPBTs) aim to overcome traditional breeding limits for fruit tree species, in order to obtain new varieties with improved organoleptic traits and resistance to biotic and abiotic stress, and to maintain fruit quality achieved over centuries by (clonal) selection. Knowledge on the gene(s) controlling a specific trait is essential for the use of NPBTs, such as genome editing and cisgenesis. In the framework of the international scientific community working on fruit tree species, including citrus, NPBTs have mainly been applied to address pathogen threats. Citrus could take advantage of NPBTs because of its complex species biology (seedlessness, apomixis, high heterozygosity, and long juvenility phase) and aptitude for in vitro manipulation. To our knowledge, genome editing in citrus via transgenesis has successful for induced resistance to Citrus bacterial canker in sweet orange and grapefruit using the resistance gene CsLOB1. In the future, NPBTs will also be used to improve fruit traits, making them healthier. The regeneration of plants following the application of NPBTs is a bottleneck, making it necessary to optimize the efficiency of current protocols. The strengths and weaknesses of using explants from young in vitro plantlets, and from mature plants, will be discussed. Other major issues addressed in this review are related to the requirement for marker-free systems and shortening the long juvenility phase. This review aims to summarize methods and approaches available in the literature that are suitable to citrus, focusing on the principles observed before the use of NPBTs.
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Affiliation(s)
- Fabrizio Salonia
- CREA - Research Centre for Olive, Fruit and Citrus Crops, Acireale, Italy
- Department of Agriculture, Food and Environment (Di3A), University of Catania, Catania, Italy
| | - Angelo Ciacciulli
- CREA - Research Centre for Olive, Fruit and Citrus Crops, Acireale, Italy
| | - Lara Poles
- CREA - Research Centre for Olive, Fruit and Citrus Crops, Acireale, Italy
- Department of Agriculture, Food and Environment (Di3A), University of Catania, Catania, Italy
| | | | - Stefano La Malfa
- Department of Agriculture, Food and Environment (Di3A), University of Catania, Catania, Italy
- *Correspondence: Stefano La Malfa, ; Concetta Licciardello,
| | - Concetta Licciardello
- CREA - Research Centre for Olive, Fruit and Citrus Crops, Acireale, Italy
- *Correspondence: Stefano La Malfa, ; Concetta Licciardello,
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12
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Song GQ, Prieto H, Orbovic V. Agrobacterium-Mediated Transformation of Tree Fruit Crops: Methods, Progress, and Challenges. FRONTIERS IN PLANT SCIENCE 2019; 10:226. [PMID: 30881368 PMCID: PMC6405644 DOI: 10.3389/fpls.2019.00226] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2018] [Accepted: 02/11/2019] [Indexed: 05/18/2023]
Abstract
Genetic engineering based on Agrobacterium-mediated transformation has been a desirable tool to manipulate single or multiple genes of existing genotypes of woody fruit crops, for which conventional breeding is a difficult and lengthy process due to heterozygosity, sexual incompatibility, juvenility, or a lack of natural sources. To date, successful transformation has been reported for many fruit crops. We review the major progress in genetic transformation of these fruit crops made in the past 5 years, emphasizing reproducible transformation protocols as well as the strategies that have been tested in fruit crops. While direct transformation of scion cultivars was mostly used for fruit quality improvement, biotic and abiotic tolerance, and functional gene analysis, transgrafting on genetically modified (GM) rootstocks showed a potential to produce non-GM fruit products. More recently, genome editing technology has demonstrated a potential for gene(s) manipulation of several fruit crops. However, substantial efforts are still needed to produce plants from gene-edited cells, for which tremendous challenge remains in the context of either cell's recalcitrance to regeneration or inefficient gene-editing due to their polyploidy. We propose that effective transient transformation and efficient regeneration are the key for future utilization of genome editing technologies for improvement of fruit crops.
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Affiliation(s)
- Guo-qing Song
- Department of Horticulture, Plant Biotechnology Resource and Outreach Center, Michigan State University, East Lansing, MI, United States
| | - Humberto Prieto
- Biotechnology Laboratory, La Platina Station, Instituto de Investigaciones Agropecuarias, Santiago de Chile, Chile
| | - Vladimir Orbovic
- Citrus Research and Education Center, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Lake Alfred, FL, United States
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Wang B, Zhang Y, Zhao J, Dong M, Zhang J. Heat-Shock-Induced Removal of Transgenes Using the Gene-Deletor System in Hybrid Aspen ( Populus tremula × P. tremuloides). Genes (Basel) 2018; 9:genes9100484. [PMID: 30297683 PMCID: PMC6210648 DOI: 10.3390/genes9100484] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2018] [Revised: 09/23/2018] [Accepted: 10/01/2018] [Indexed: 11/19/2022] Open
Abstract
To evaluate the efficacy of the gene-deletor system in aspen, we evaluated the system for foreign gene removal in a hybrid aspen clone, INRA 353-53 (Populus tremula × P. tremuloides). The recombinase flipping DNA (FLP) gene was under the control of the heat-inducible promoter of Gmhsp17.6-L, and the β-glucuronidase (gusA) gene which was under the control of the 35S promoter and were constructed using the gene-deletor system in the pCaLFGmFNLFG vector. Six transgenic plants and their sublines were heated at 42 °C for 8 h and gene deletion was verified by polymerase chain reaction (PCR). Three lines exhibited partial transgene deletion while the remaining three lines did not delete. Transgenic lines were evaluated by Southern-blot analyses, verifying that the six transgenic plant lines all had a single copy of transfer DNA (t-DNA). Two partial-deletion lines and two non-deletion lines were analysed for methylation and expression of promoter and recombinase. Hardly any methylation was detected in the Gmhsp17.6-L promoter or recombinase FLP gene sequences, however, the expression of the promoter and recombinase was increased significantly in the partial-deletion compared with the non-deletion line after heat-shock treatment. These results suggest that the excision efficiency had no direct relationship with methylation status of the Gmhsp17.6-L promoter and FLP recombinase, yet was affected by the expression of the Gmhsp17.6-L and FLP after heat-shock treatment.
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Affiliation(s)
- Beibei Wang
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Tree and Ornamental Plants of Ministry of Education, Key Laboratory of Forest Trees and Ornamental Plants Biological Engineering of State Forestry Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China.
- Beijing Academy of Forestry and Pomology Sciences, Beijing 100093, China.
| | - Yan Zhang
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Tree and Ornamental Plants of Ministry of Education, Key Laboratory of Forest Trees and Ornamental Plants Biological Engineering of State Forestry Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China.
| | - Jian Zhao
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Tree and Ornamental Plants of Ministry of Education, Key Laboratory of Forest Trees and Ornamental Plants Biological Engineering of State Forestry Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China.
| | - Mingliang Dong
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Tree and Ornamental Plants of Ministry of Education, Key Laboratory of Forest Trees and Ornamental Plants Biological Engineering of State Forestry Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China.
| | - Jinfeng Zhang
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Tree and Ornamental Plants of Ministry of Education, Key Laboratory of Forest Trees and Ornamental Plants Biological Engineering of State Forestry Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China.
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Dutt M, Zambon FT, Erpen L, Soriano L, Grosser J. Embryo-specific expression of a visual reporter gene as a selection system for citrus transformation. PLoS One 2018; 13:e0190413. [PMID: 29293649 PMCID: PMC5749800 DOI: 10.1371/journal.pone.0190413] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2017] [Accepted: 12/14/2017] [Indexed: 01/18/2023] Open
Abstract
The embryo-specific Dc3 gene promoter driving the VvMybA1 anthocyanin regulatory gene was used to develop a visual selection system for the genetic transformation of citrus. Agrobacterium-mediated transformation of cell suspension cultures resulted in the production of purple transgenic somatic embryos that could be easily separated from the green non-transgenic embryos. The somatic embryos produced phenotypically normal plants devoid of any visual purple coloration. These results were also confirmed using protoplast transformation. There was minimal gene expression in unstressed one-year-old transgenic lines. Cold and drought stress did not have any effect on gene expression, while exogenous ABA and NaCl application resulted in a minor change in gene expression in several transgenic lines. When gas exchange was measured in intact leaves, the transgenic lines were similar to controls under the same environment. Our results provide conclusive evidence for the utilization of a plant-derived, embryo-specific visual reporter system for the genetic transformation of citrus. Such a system could aid in the development of an all-plant, consumer-friendly GM citrus tree.
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Affiliation(s)
- Manjul Dutt
- Citrus Research and Education Center, University of Florida, Lake Alfred, Florida, United States of America
- * E-mail:
| | - Flavia T. Zambon
- Citrus Research and Education Center, University of Florida, Lake Alfred, Florida, United States of America
| | - Lígia Erpen
- Citrus Research and Education Center, University of Florida, Lake Alfred, Florida, United States of America
- Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Piracicaba, São Paulo, Brazil
| | - Leonardo Soriano
- Universidade de São Paulo, Escola Superior de Agricultura Luiz de Queiroz, Piracicaba, São Paulo, Brazil
| | - Jude Grosser
- Citrus Research and Education Center, University of Florida, Lake Alfred, Florida, United States of America
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Cold inducible promoter driven Cre-lox system proved to be highly efficient for marker gene excision in transgenic barley. J Biotechnol 2017; 265:15-24. [PMID: 29103986 DOI: 10.1016/j.jbiotec.2017.10.016] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2017] [Revised: 10/16/2017] [Accepted: 10/26/2017] [Indexed: 12/12/2022]
Abstract
A Cre-lox based auto-excision strategy has been adapted for barley, capable of cre and selectable marker gene (SMG) removal. The cold inducible wheat promoter called wcs120 was utilised for driving Cre expression. The binary vector was carrying the transgene (uidA) and a so called 'recombination cassette' flanked by the lox sequences. This part included both the recombinase gene and the SMG (bar) under the control of a constitutive promoter. T0, T1 and T2 transgenic plants were subjected to low temperature (at 4°C, 10°C and 12°C) at different developmental stages to induce recombination. The presence of uidA, cre, and bar genes and recombination footprints were studied by PCR and DNA sequencing, while cre transcription was followed by qRT-PCR. These analyses indicated that, cold treatment of the germinating seeds (4°C for 3days) followed by plant growing at higher temperature (24°C) has been the most efficient (90-100%), and this treatment lead to heritable changes in the genome. Thermal separation of Cre accumulation (at low temperature) from Cre enzyme activity (at higher temperature) could have prevented the premature excision of its own encoding gene, and lead to high expression level thereby increasing recombination frequency.
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16
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Ge J, Wang L, Yang C, Ran L, Wen M, Fu X, Fan D, Luo K. Intein-mediated Cre protein assembly for transgene excision in hybrid progeny of transgenic Arabidopsis. PLANT CELL REPORTS 2016; 35:2045-2053. [PMID: 27324752 DOI: 10.1007/s00299-016-2015-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2016] [Accepted: 06/07/2016] [Indexed: 06/06/2023]
Abstract
An approach for restoring recombination activity of complementation split-Cre was developed to excise the transgene in hybrid progeny of GM crops. Growing concerns about the biosafety of genetically modified (GM) crops has currently become a limited factor affecting the public acceptance. Several approaches have been developed to generate selectable-marker-gene-free GM crops. However, no strategy was reported to be broadly applicable to hybrid crops. Previous studies have demonstrated that complementation split-Cre recombinase restored recombination activity in transgenic plants. In this study, we found that split-Cre mediated by split-intein Synechocystis sp. DnaE had high recombination efficiency when Cre recombinase was split at Asp232/Asp233 (866 bp). Furthermore, we constructed two plant expression vectors, pCA-NCre-In and pCA-Ic-CCre, containing NCre866-In and Ic-CCre866 fragments, respectively. After transformation, parent lines of transgenic Arabidopsis with one single copy were generated and used for hybridization. The results of GUS staining demonstrated that the recombination activity of split-Cre could be reassembled in these hybrid progeny of transgenic plants through hybridization and the foreign genes flanked by two loxP sites were efficiently excised. Our strategy may provide an effective approach for generating the next generation of GM hybrid crops without biosafety concerns.
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Affiliation(s)
- Jia Ge
- Institute of Resources Botany, School of Life Sciences, Southwest University, Chongqing, 400715, China
| | - Lijun Wang
- Institute of Resources Botany, School of Life Sciences, Southwest University, Chongqing, 400715, China
| | - Chen Yang
- Institute of Resources Botany, School of Life Sciences, Southwest University, Chongqing, 400715, China
| | - Lingyu Ran
- Institute of Resources Botany, School of Life Sciences, Southwest University, Chongqing, 400715, China
| | - Mengling Wen
- Institute of Resources Botany, School of Life Sciences, Southwest University, Chongqing, 400715, China
| | - Xianan Fu
- Institute of Resources Botany, School of Life Sciences, Southwest University, Chongqing, 400715, China
| | - Di Fan
- Institute of Resources Botany, School of Life Sciences, Southwest University, Chongqing, 400715, China
| | - Keming Luo
- Institute of Resources Botany, School of Life Sciences, Southwest University, Chongqing, 400715, China.
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Sun H, Chen H, Zang X, Hou P, Zhou B, Liu Y, Wu F, Cao X, Zhang X. Application of the Cre/loxP Site-Specific Recombination System for Gene Transformation in Aurantiochytrium limacinum. Molecules 2015; 20:10110-21. [PMID: 26039334 PMCID: PMC6272215 DOI: 10.3390/molecules200610110] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2015] [Revised: 05/08/2015] [Accepted: 05/21/2015] [Indexed: 12/14/2022] Open
Abstract
The Cre/loxP site-specific recombination system was applied to Aurantiochytrium limacinum to obtain a transformant without the antibiotic resistance marker gene. First, the enhanced green fluorescent protein gene (egfp) and chloramphenicol resistance gene (Cmr), along with the two loxP loci, were integrated into the genome of A. limacinum OUC88 using 18S rDNA sequences as the homologous recombination sites. Then plasmid pSH65, containing a zeocin resistance gene (Bler) was transferred into A. limacinum OUC_CG. After induction with galactose, repeated passage in culture and PCR-based assessment, the pSH65 plasmid was lost and A. limacinum OUC_EG host was shown to no longer have resistance to 100 mg chloramphenicol/L or 5 mg zeocin/L. Through southern blotting and fluorescence detection, egfp was found to be integrated into the genome of A. limacinum OUC_EG, and EGFP was successfully expressed in the cells. The successful application of the Cre/loxP system demonstrates an experimental basis for genetic modification of A. limacinum so as to obtain transformed strains with no antibiotic resistance marker genes.
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Affiliation(s)
- Hengyi Sun
- Key Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, China.
| | - Hao Chen
- Key Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, China.
| | - Xiaonan Zang
- Key Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, China.
| | - Pan Hou
- Key Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, China.
| | - Bingbing Zhou
- Key Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, China.
| | - Yuantao Liu
- Key Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, China.
| | - Fei Wu
- Key Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, China.
| | - Xiaofei Cao
- Key Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, China.
| | - Xuecheng Zhang
- Key Laboratory of Marine Genetics and Breeding, Ministry of Education, Ocean University of China, Qingdao 266003, China.
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18
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Dunne A, Maple-Grødem J, Gargano D, Haslam RP, Napier JA, Chua NH, Russell R, Møller SG. Modifying fatty acid profiles through a new cytokinin-based plastid transformation system. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2014; 80:1131-8. [PMID: 25280363 DOI: 10.1111/tpj.12684] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2014] [Revised: 09/05/2014] [Accepted: 09/17/2014] [Indexed: 06/03/2023]
Abstract
The widespread use of herbicides and antibiotics for selection of transgenic plants has not been very successful with regard to commercialization and public acceptance. Hence, alternative selection systems are required. In this study, we describe the use of ipt, the bacterial gene encoding the enzyme isopentenyl transferase from Agrobacterium tumefaciens, as a positive selectable marker for plastid transformation. A comparison between the traditional spectinomycin-based aadA selection system and the ipt selection system demonstrated that selection of transplastomic plants on medium lacking cytokinin was as effective as selection on medium containing spectinomycin. Proof of principle was demonstrated by transformation of the kasIII gene encoding 3-ketoacyl acyl carrier protein synthase III into tobacco plastids. Transplastomic tobacco plants were readily obtained using the ipt selection system, and were phenotypically normal despite over-expression of isopentenyl transferase. Over-expression of KASIII resulted in a significant increase in 16:0 fatty acid levels, and a significant decrease in the levels of 18:0 and 18:1 fatty acids. Our study demonstrates use of a novel positive plastid transformation system that may be used for selection of transplastomic plants without affecting the expression of transgenes within the integrated vector cassette or the resulting activity of the encoded protein. This system has the potential to be applied to monocots, which are typically not amenable to traditional antibiotic-based selection systems, and may be used in combination with a negative selectable marker as part of a two-step selection system to obtain homoplasmic plant lines.
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Affiliation(s)
- Aisling Dunne
- Plastid AS, Professor Hansteens Gate 7A, 4036, Stavanger, Norway; Department of Biological Sciences, St John's University, New York, NY, 11439, USA
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Jia H, Wang N. Xcc-facilitated agroinfiltration of citrus leaves: a tool for rapid functional analysis of transgenes in citrus leaves. PLANT CELL REPORTS 2014; 33:1993-2001. [PMID: 25146436 DOI: 10.1007/s00299-014-1673-9] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2014] [Revised: 07/14/2014] [Accepted: 08/04/2014] [Indexed: 05/21/2023]
Abstract
Xanthomonas citri subsp. citri pretreatment before agroinfiltration could significantly promote transient expression in citrus leaves which were previously recalcitrant to agroinfiltration. Transient expression via agroinfiltration is widely used in biotechnology but remains problematic in many economically important plants. Xanthomonas citri subsp. citri (Xcc)-facilitated agroinfiltration was employed to promote transient protein expression in Valencia sweet orange leaves, which are recalcitrant to agroinfiltration. However, it is unclear whether Xcc-facilitated agroinfiltration has broad application, i.e., whether Xcc-facilitated agroinfiltration could be used on other citrus varieties. In addition, we intended to investigate whether Xcc-facilitated agroinfiltration could be used to hasten transgene function assays, e.g., Cre/lox system and Cas9/sgRNA system. In this report, Xcc-facilitated agroinfiltration was further exploited to enhance β-glucuronidase (GUS) expression in five citrus varieties. Xcc-facilitated agroinfiltration also significantly increased GFP expression in six citrus varieties tested. Both GUS and GFP assays indicated that Xcc-facilitated agroinfiltration had the best performance in grapefruit. After Xcc-facilitated agroinfiltration was carried out in grapefruit, protoplast analysis of the transformed cells indicated that there were more than 20 % leaf cells expressing GFP. In grapefruit, usefulness of Xcc-facilitated agroinfiltration was assayed in three case studies: (1) fast functional analysis of Cre/lox system, (2) the heat shock regulation of HSP70B promoter derived from Arabidopsis, and (3) Cas9/sgRNA-mediated genome modification.
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Affiliation(s)
- Hongge Jia
- Citrus Research and Education Center, Department of Microbiology and Cell Science, University of Florida, Lake Alfred, Fl, USA
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