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Dussex N, Robertson BC, Salis AT, Kalinin A, Best H, Gemmell NJ. Low Spatial Genetic Differentiation Associated with Rapid Recolonization in the New Zealand Fur Seal Arctocephalus forsteri. J Hered 2016; 107:581-592. [PMID: 27563072 DOI: 10.1093/jhered/esw056] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2016] [Accepted: 08/15/2016] [Indexed: 11/14/2022] Open
Abstract
Population declines resulting from anthropogenic activities are of major consequence for the long-term survival of species because the resulting loss of genetic diversity can lead to extinction via the effects of inbreeding depression, fixation of deleterious mutations, and loss of adaptive potential. Otariid pinnipeds have been exploited commercially to near extinction with some species showing higher demographic resilience and recolonization potential than others. The New Zealand fur seal (NZFS) was heavily impacted by commercial sealing between the late 18th and early 19th centuries, but has recolonized its former range in southern Australia. The species has also recolonized its former range in New Zealand, yet little is known about the pattern of recolonization. Here, we first used 11 microsatellite markers (n = 383) to investigate the contemporary population structure and dispersal patterns in the NZFS (Arctocephalus forsteri). Secondly, we model postsealing recolonization with 1 additional mtDNA cytochrome b (n = 261) marker. Our data identified 3 genetic clusters: an Australian, a subantarctic, and a New Zealand one, with a weak and probably transient subdivision within the latter cluster. Demographic history scenarios supported a recolonization of the New Zealand coastline from remote west coast colonies, which is consistent with contemporary gene flow and with the species' high resilience. The present data suggest the management of distinct genetic units in the North and South of New Zealand along a genetic gradient. Assignment of individuals to their colony of origin was limited (32%) with the present data indicating the current microsatellite markers are unlikely sufficient to assign fisheries bycatch of NZFSs to colonies.
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Affiliation(s)
- Nicolas Dussex
- From the Department of Zoology, University of Otago, Dunedin, New Zealand (Dussex, Robertson, and Salis); Allan Wilson Centre, Dunedin, New Zealand (Dussex and Gemmell); Department of Anatomy, University of Otago, PO Box 913, Dunedin 9054, New Zealand (Dussex and Gemmell); School of Biological Sciences, University of Canterbury, Christchurch, New Zealand (Robertson, Kalinin, and Gemmell); and Marine Conservation Unit, Department of Conservation, Wellington, New Zealand (Best)
| | - Bruce C Robertson
- From the Department of Zoology, University of Otago, Dunedin, New Zealand (Dussex, Robertson, and Salis); Allan Wilson Centre, Dunedin, New Zealand (Dussex and Gemmell); Department of Anatomy, University of Otago, PO Box 913, Dunedin 9054, New Zealand (Dussex and Gemmell); School of Biological Sciences, University of Canterbury, Christchurch, New Zealand (Robertson, Kalinin, and Gemmell); and Marine Conservation Unit, Department of Conservation, Wellington, New Zealand (Best)
| | - Alexander T Salis
- From the Department of Zoology, University of Otago, Dunedin, New Zealand (Dussex, Robertson, and Salis); Allan Wilson Centre, Dunedin, New Zealand (Dussex and Gemmell); Department of Anatomy, University of Otago, PO Box 913, Dunedin 9054, New Zealand (Dussex and Gemmell); School of Biological Sciences, University of Canterbury, Christchurch, New Zealand (Robertson, Kalinin, and Gemmell); and Marine Conservation Unit, Department of Conservation, Wellington, New Zealand (Best)
| | - Aleksandr Kalinin
- From the Department of Zoology, University of Otago, Dunedin, New Zealand (Dussex, Robertson, and Salis); Allan Wilson Centre, Dunedin, New Zealand (Dussex and Gemmell); Department of Anatomy, University of Otago, PO Box 913, Dunedin 9054, New Zealand (Dussex and Gemmell); School of Biological Sciences, University of Canterbury, Christchurch, New Zealand (Robertson, Kalinin, and Gemmell); and Marine Conservation Unit, Department of Conservation, Wellington, New Zealand (Best)
| | - Hugh Best
- From the Department of Zoology, University of Otago, Dunedin, New Zealand (Dussex, Robertson, and Salis); Allan Wilson Centre, Dunedin, New Zealand (Dussex and Gemmell); Department of Anatomy, University of Otago, PO Box 913, Dunedin 9054, New Zealand (Dussex and Gemmell); School of Biological Sciences, University of Canterbury, Christchurch, New Zealand (Robertson, Kalinin, and Gemmell); and Marine Conservation Unit, Department of Conservation, Wellington, New Zealand (Best)
| | - Neil J Gemmell
- From the Department of Zoology, University of Otago, Dunedin, New Zealand (Dussex, Robertson, and Salis); Allan Wilson Centre, Dunedin, New Zealand (Dussex and Gemmell); Department of Anatomy, University of Otago, PO Box 913, Dunedin 9054, New Zealand (Dussex and Gemmell); School of Biological Sciences, University of Canterbury, Christchurch, New Zealand (Robertson, Kalinin, and Gemmell); and Marine Conservation Unit, Department of Conservation, Wellington, New Zealand (Best)
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Rawlence NJ, Collins CJ, Anderson CNK, Maxwell JJ, Smith IWG, Robertson BC, Knapp M, Horsburgh KA, Stanton JAL, Scofield RP, Tennyson AJD, Matisoo-Smith EA, Waters JM. Human-mediated extirpation of the unique Chatham Islands sea lion and implications for the conservation management of remaining New Zealand sea lion populations. Mol Ecol 2016; 25:3950-61. [DOI: 10.1111/mec.13726] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2016] [Revised: 05/30/2016] [Accepted: 06/01/2016] [Indexed: 02/04/2023]
Affiliation(s)
- Nicolas J. Rawlence
- Department of Zoology; Allan Wilson Centre; University of Otago; Dunedin New Zealand
- Canterbury Museum; Christchurch New Zealand
| | - Catherine J. Collins
- Department of Anatomy; Allan Wilson Centre; University of Otago; Dunedin New Zealand
| | | | - Justin J. Maxwell
- Department of Anthropology and Archaeology; University of Otago; Dunedin New Zealand
| | - Ian W. G. Smith
- Department of Anthropology and Archaeology; University of Otago; Dunedin New Zealand
| | - Bruce C. Robertson
- Department of Zoology; Allan Wilson Centre; University of Otago; Dunedin New Zealand
| | - Michael Knapp
- Department of Anatomy; Allan Wilson Centre; University of Otago; Dunedin New Zealand
| | - Katherine Ann Horsburgh
- Department of Anthropology; Southern Methodist University; Dallas TX USA
- School of Geography, Archaeology and Environmental Studies; University of the Witwatersrand; Wits 2050 South Africa
| | - Jo-Ann L. Stanton
- Department of Anatomy; Allan Wilson Centre; University of Otago; Dunedin New Zealand
| | | | | | | | - Jonathan M. Waters
- Department of Zoology; Allan Wilson Centre; University of Otago; Dunedin New Zealand
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Collins CJ, Chilvers BL, Taylor M, Robertson BC. Historical population size of the threatened New Zealand sea lion
Phocarctos hookeri. J Mammal 2015. [DOI: 10.1093/jmammal/gyv187] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Abstract
Marine mammal species were exploited worldwide during periods of commercial sealing in the 18th and 19th centuries. For many of these species, an estimate of the pre-exploitation abundance of the species is lacking, as historical catch records are generally scarce and inaccurate. Genetic estimates of long-term effective population size provide a means to estimate the pre-exploitation abundance. Here, we apply genetic methods to estimate the long-term effective population size of the subantarctic lineage of the New Zealand sea lion (NZ sea lion), Phocarctos hookeri . This species is predominantly restricted to the subantarctic islands, south of mainland New Zealand, following commercial sealing in the 19th century. Today, the population consists of ~9,880 animals and population growth is slow. Auckland Island breeding colonies of NZ sea lion are currently impacted by commercial trawl fisheries via regular sea lion deaths as bycatch. In order to estimate sustainable levels of bycatch, an estimate of the population’s carrying capacity ( K ) is required. We apply the genetically estimated long-term effective population size of NZ sea lions as a proxy for the estimated historical carrying capacity of the subantarctic population. The historical abundance of subantarctic NZ sea lions was significantly higher than the target values of K employed by the contemporary management. The current management strategy may allow unsustainable bycatch levels, thereby limiting the recovery of the NZ sea lion population toward historical carrying capacity.
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Affiliation(s)
- Catherine J. Collins
- Allan Wilson Centre for Molecular Ecology and Evolution, Department of Zoology, University of Otago , P.O. Box 56, Dunedin 9016 , New Zealand (CJC, MT, BCR)
- Department of Conservation, Marine Species and Threats , Wellington 6011 , New Zealand (BLC)
- Wildbase, IVABS, Massey University , Private Bag 11–222, Palmerston North 4442 , New Zealand (BLC)
| | - B. Louise Chilvers
- Allan Wilson Centre for Molecular Ecology and Evolution, Department of Zoology, University of Otago , P.O. Box 56, Dunedin 9016 , New Zealand (CJC, MT, BCR)
- Department of Conservation, Marine Species and Threats , Wellington 6011 , New Zealand (BLC)
- Wildbase, IVABS, Massey University , Private Bag 11–222, Palmerston North 4442 , New Zealand (BLC)
| | - Matthew Taylor
- Allan Wilson Centre for Molecular Ecology and Evolution, Department of Zoology, University of Otago , P.O. Box 56, Dunedin 9016 , New Zealand (CJC, MT, BCR)
- Department of Conservation, Marine Species and Threats , Wellington 6011 , New Zealand (BLC)
- Wildbase, IVABS, Massey University , Private Bag 11–222, Palmerston North 4442 , New Zealand (BLC)
| | - Bruce C. Robertson
- Allan Wilson Centre for Molecular Ecology and Evolution, Department of Zoology, University of Otago , P.O. Box 56, Dunedin 9016 , New Zealand (CJC, MT, BCR)
- Department of Conservation, Marine Species and Threats , Wellington 6011 , New Zealand (BLC)
- Wildbase, IVABS, Massey University , Private Bag 11–222, Palmerston North 4442 , New Zealand (BLC)
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