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Kelly BS, Mathur P, McGuinness G, Dillon H, Lee EH, Yeom KW, Lawlor A, Killeen RP. A Radiomic "Warning Sign" of Progression on Brain MRI in Individuals with MS. AJNR Am J Neuroradiol 2024; 45:236-243. [PMID: 38216299 DOI: 10.3174/ajnr.a8104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Accepted: 11/08/2023] [Indexed: 01/14/2024]
Abstract
BACKGROUND AND PURPOSE MS is a chronic progressive, idiopathic, demyelinating disorder whose diagnosis is contingent on the interpretation of MR imaging. New MR imaging lesions are an early biomarker of disease progression. We aimed to evaluate a machine learning model based on radiomics features in predicting progression on MR imaging of the brain in individuals with MS. MATERIALS AND METHODS This retrospective cohort study with external validation on open-access data obtained full ethics approval. Longitudinal MR imaging data for patients with MS were collected and processed for machine learning. Radiomics features were extracted at the future location of a new lesion in the patients' prior MR imaging ("prelesion"). Additionally, "control" samples were obtained from the normal-appearing white matter for each participant. Machine learning models for binary classification were trained and tested and then evaluated the external data of the model. RESULTS The total number of participants was 167. Of the 147 in the training/test set, 102 were women and 45 were men. The average age was 42 (range, 21-74 years). The best-performing radiomics-based model was XGBoost, with accuracy, precision, recall, and F1-score of 0.91, 0.91, 0.91, and 0.91 on the test set, and 0.74, 0.74, 0.74, and 0.70 on the external validation set. The 5 most important radiomics features to the XGBoost model were associated with the overall heterogeneity and low gray-level emphasis of the segmented regions. Probability maps were produced to illustrate potential future clinical applications. CONCLUSIONS Our machine learning model based on radiomics features successfully differentiated prelesions from normal-appearing white matter. This outcome suggests that radiomics features from normal-appearing white matter could serve as an imaging biomarker for progression of MS on MR imaging.
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Affiliation(s)
- Brendan S Kelly
- From the Department of Radiology (B.S.K., G.M., H.D., R.P.K.), St. Vincent's University Hospital, Dublin, Ireland
- Insight Centre for Data Analytics (B.S.K., P.M., A.L.), University College Dublin, Dublin, Ireland
- Wellcome Trust and Health Research Board (B.S.K.), Irish Clinical Academic Training, Dublin, Ireland
- School of Medicine (B.S.K.), University College Dublin, Dublin, Ireland
| | - Prateek Mathur
- Insight Centre for Data Analytics (B.S.K., P.M., A.L.), University College Dublin, Dublin, Ireland
| | - Gerard McGuinness
- From the Department of Radiology (B.S.K., G.M., H.D., R.P.K.), St. Vincent's University Hospital, Dublin, Ireland
| | - Henry Dillon
- From the Department of Radiology (B.S.K., G.M., H.D., R.P.K.), St. Vincent's University Hospital, Dublin, Ireland
| | - Edward H Lee
- Lucille Packard Children's Hospital at Stanford (E.H.L., K.W.Y.), Stanford, California
| | - Kristen W Yeom
- Lucille Packard Children's Hospital at Stanford (E.H.L., K.W.Y.), Stanford, California
| | - Aonghus Lawlor
- Insight Centre for Data Analytics (B.S.K., P.M., A.L.), University College Dublin, Dublin, Ireland
| | - Ronan P Killeen
- From the Department of Radiology (B.S.K., G.M., H.D., R.P.K.), St. Vincent's University Hospital, Dublin, Ireland
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