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Gang H, He H, Yu Z, Wang Z, Liu J, He X, Bao X, Li Y, Mu BZ. A Coarse-Grained Model for Microbial Lipopeptide Surfactin and Its Application in Self-Assembly. J Phys Chem B 2020; 124:1839-1846. [PMID: 32083878 DOI: 10.1021/acs.jpcb.9b11381] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Biosurfactants exhibit outstanding interfacial properties and unique biological activities that fairly related to their self-assembly in solutions and at interfaces. Computational simulations provide structural details of biosurfactant aggregates at the molecular level relevant to thermodynamic properties, but the understanding of kinetics of self-assembly remains limited due to lower simulation efficiency. In this work, a coarse-grained model has been developed for microbial lipopeptide surfactin, and surfactin monolayer at the octane/water interface and micelle in aqueous solution were studied using molecular dynamics simulations. Interaction parameters were optimized and validated by comparing with results obtained from experiments and atomistic molecular dynamics simulations. In particular, self-assembly of surfactin in aqueous solution was studied using the optimized parameters. Results showed that coarse-grained simulations well reproduced structural properties of surfactin monolayer and micelle and the molecular behavior such as surfactin orientation and conformation. Self-assembly features of surfactin in different stages have been captured, and the aggregation numbers of dominant clusters were in accordance with experimental data. This report suggested that the present coarse-grained model and interaction parameters allowed surfactin simulations over longer timescales and larger systems, which provide insights into characterizing both the kinetics of surfactin self-assembly and the adsorption of surfactin onto varying interfaces.
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Affiliation(s)
- Hongze Gang
- State Key Laboratory of Bioreactor Engineering and School of Chemistry and Molecular Engineering, East China University of Science and Technology, Meilong 130, 200237 Shanghai, P.R. China.,Engineering Research Center of Microbial Enhanced Oil Recovery, MOE, East China University of Science and Technology, Meilong 130, 200237 Shanghai, P.R. China
| | - Hao He
- State Key Laboratory of Bioreactor Engineering and School of Chemistry and Molecular Engineering, East China University of Science and Technology, Meilong 130, 200237 Shanghai, P.R. China
| | - Zhou Yu
- State Key Laboratory of Bioreactor Engineering and School of Chemistry and Molecular Engineering, East China University of Science and Technology, Meilong 130, 200237 Shanghai, P.R. China
| | - Zhenyu Wang
- State Key Laboratory of Bioreactor Engineering and School of Chemistry and Molecular Engineering, East China University of Science and Technology, Meilong 130, 200237 Shanghai, P.R. China
| | - Jinfeng Liu
- State Key Laboratory of Bioreactor Engineering and School of Chemistry and Molecular Engineering, East China University of Science and Technology, Meilong 130, 200237 Shanghai, P.R. China.,Engineering Research Center of Microbial Enhanced Oil Recovery, MOE, East China University of Science and Technology, Meilong 130, 200237 Shanghai, P.R. China
| | - Xiujuan He
- Sinopec Key Lab of Surfactants for EOR, Sinopec Shanghai Research Institute of Petrochemical Technology, North Pudong 1658, 201208 Shanghai, P.R. China
| | - Xinning Bao
- State Key Laboratory of Bioreactor Engineering and School of Chemistry and Molecular Engineering, East China University of Science and Technology, Meilong 130, 200237 Shanghai, P.R. China.,Sinopec Key Lab of Surfactants for EOR, Sinopec Shanghai Research Institute of Petrochemical Technology, North Pudong 1658, 201208 Shanghai, P.R. China
| | - Yingcheng Li
- Sinopec Key Lab of Surfactants for EOR, Sinopec Shanghai Research Institute of Petrochemical Technology, North Pudong 1658, 201208 Shanghai, P.R. China
| | - Bo-Zhong Mu
- State Key Laboratory of Bioreactor Engineering and School of Chemistry and Molecular Engineering, East China University of Science and Technology, Meilong 130, 200237 Shanghai, P.R. China.,Engineering Research Center of Microbial Enhanced Oil Recovery, MOE, East China University of Science and Technology, Meilong 130, 200237 Shanghai, P.R. China
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5
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Enzymatic removal of protein fouling from self-assembled cellulosic nanofilms: experimental and modeling studies. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2018; 47:951-960. [DOI: 10.1007/s00249-018-1320-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2018] [Revised: 06/09/2018] [Accepted: 07/04/2018] [Indexed: 10/28/2022]
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6
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Zhang J, Li Y. Study on the interaction between surfactin and alkaline protease in aqueous solution. Int J Biol Macromol 2018; 118:244-251. [PMID: 29913191 DOI: 10.1016/j.ijbiomac.2018.06.051] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2018] [Revised: 06/05/2018] [Accepted: 06/11/2018] [Indexed: 12/17/2022]
Abstract
The interaction between surfactin and alkaline protease in aqueous solution has been studied. Ultraviolet visible absorption spectra (UV-vis) show that surfactin causes the extension of peptide chain of the alkaline protease resulting in the weakening of hydrophobic interaction between the hydrophobic groups. Fluorescence spectra indicate that the interaction of surfactin with the tryptophan and tyrosine residues led to a change of conformation of the alkaline protease. Fourier transform infrared spectroscopy (FTIR) proves complex weak interactions between surfactin and alkaline protease, especially hydrogen bonds. Enzyme activity measurements demonstrate that low concentration of surfactin can increase the enzyme activity of alkaline protease, while high concentrations inhibit it. The particle size and Zeta potential measurements confirm that the system particle size and Zeta potential are dependent on the concentration of surfactin, in addition, there is the electrostatic interaction between surfactin and alkaline protease. Surface tension measurements indicate that the binds of surfactin and alkaline protease molecules are spontaneous. Based on experimental results, the composite model of surfactin and alkaline protease in aqueous solution is proposed.
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Affiliation(s)
- Jian Zhang
- College of Chemistry and Chemical Engineering, Shanxi University, Taiyuan, Shanxi 030006, China.
| | - Yanyan Li
- College of Chemistry and Chemical Engineering, Shanxi University, Taiyuan, Shanxi 030006, China
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7
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Dynamic surface tension and adsorption mechanism of surfactin biosurfactant at the air–water interface. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2018; 47:631-640. [DOI: 10.1007/s00249-018-1289-z] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2017] [Revised: 12/26/2017] [Accepted: 02/19/2018] [Indexed: 11/25/2022]
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8
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Bakhshi N, Soleimanian-Zad S, Sheikh-Zeinoddin M. Dynamic surface tension measurement for the screening of biosurfactants produced by Lactobacillus plantarum subsp. plantarum PTCC 1896. Enzyme Microb Technol 2017; 101:1-8. [DOI: 10.1016/j.enzmictec.2017.02.010] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2016] [Revised: 02/18/2017] [Accepted: 02/20/2017] [Indexed: 12/27/2022]
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11
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He Z, Zeng W, Zhu X, Zhao H, Lu Y, Lu Z. Influence of surfactin on physical and oxidative stability of microemulsions with docosahexaenoic acid. Colloids Surf B Biointerfaces 2017; 151:232-239. [DOI: 10.1016/j.colsurfb.2016.12.026] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2016] [Revised: 12/07/2016] [Accepted: 12/18/2016] [Indexed: 11/16/2022]
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12
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Benchmarking the Self-Assembly of Surfactin Biosurfactant at the Liquid-Air Interface to those of Synthetic Surfactants. J SURFACTANTS DETERG 2016; 19:645-652. [PMID: 27182192 PMCID: PMC4839061 DOI: 10.1007/s11743-016-1796-9] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2015] [Accepted: 02/11/2016] [Indexed: 11/16/2022]
Abstract
The adsorption of surfactin, a lipopeptide biosurfactant, at the liquid–air interface has been investigated in this work. The maximum adsorption density and the nature and the extent of lateral interaction between the adsorbed surfactin molecules at the interface were estimated from surface tension data using the Frumkin model. The quantitative information obtained using the Frumkin model was also compared to those obtained using the Gibbs equation and the Langmuir–Szyszkowski model. Error analysis showed a better agreement between the experimental and the calculated values using the Frumkin model relative to the other two models. The adsorption of surfactin at the liquid–air interface was also compared to those of synthetic anionic, sodium dodecylbenzenesulphonate (SDBS), and nonionic, octaethylene glycol monotetradecyl ether (C14E8), surfactants. It has been estimated that the area occupied by a surfactin molecule at the interface is about 3- and 2.5-fold higher than those occupied by SDBS and C14E8 molecules, respectively. The interaction between the adsorbed molecules of the anionic biosurfactant (surfactin) was estimated to be attractive, unlike the mild repulsive interaction between the adsorbed SDBS molecules.
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Onaizi SA, Nasser MS, Al-Lagtah NMA. Self-assembly of a surfactin nanolayer at solid–liquid and air–liquid interfaces. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2015; 45:331-9. [DOI: 10.1007/s00249-015-1099-5] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2015] [Revised: 10/29/2015] [Accepted: 11/08/2015] [Indexed: 11/25/2022]
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14
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Gang H, Liu J, Mu B. Binding structure and kinetics of surfactin monolayer formed at the air/water interface to counterions: A molecular dynamics simulation study. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2015; 1848:1955-62. [DOI: 10.1016/j.bbamem.2015.05.016] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2015] [Revised: 05/09/2015] [Accepted: 05/19/2015] [Indexed: 10/23/2022]
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15
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Onaizi SA, Nasser MS, Al-Lagtah NMA. Adsorption of an anionic surfactant at air-liquid and different solid-liquid interfaces from solutions containing high counter-ion concentration. Colloid Polym Sci 2015. [DOI: 10.1007/s00396-015-3694-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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