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Rossier O, Labarre C, Lopes A, Auberdiac M, Tambosco K, Delaruelle D, Abes H, Arteni AA, Ouldali M, Pieri L, Afgoun R, Anacleto L, Beaure N, Beghdad M, Bellom N, Ben Hamou-Kuijpers E, Boukamel A, Carron J, Carta V, Castelneau L, Chadaillac Z, Chaouat E, Desmat S, Favel K, Gabillot E, Gargar M, Gautheret M, Gilles E, Lager C, Le Deit A, Le vay Y, Lemercier L, Litvinov A, Moussi S, Prevot M, Rehala M, Rodrigues C, Sambe R, Srimoorthy A, Tillay TM, Verhoeven C, Vittaz P, Wu J, Regeard C. Genome sequence of PSonyx, a singleton bacteriophage infecting Corynebacterium glutamicum. Microbiol Resour Announc 2024; 13:e0115523. [PMID: 38236045 PMCID: PMC10868258 DOI: 10.1128/mra.01155-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Accepted: 12/15/2023] [Indexed: 01/19/2024] Open
Abstract
PSonyx is a newly isolated phage that infects Corynebacterium glutamicum. This siphovirus was isolated from a French pond in the south of Paris by students from Paris-Saclay University. Its 80,277-bp singleton genome carries 136 protein-coding genes and 5 tRNAs.
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Affiliation(s)
- Ombeline Rossier
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Saclay, Gif-sur-Yvette, France
| | - Cécile Labarre
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Saclay, Gif-sur-Yvette, France
| | - Anne Lopes
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Saclay, Gif-sur-Yvette, France
| | - Monique Auberdiac
- Faculté des Sciences d’Orsay, Université Paris-Saclay, Orsay, France
| | - Kevin Tambosco
- Faculté des Sciences d’Orsay, Université Paris-Saclay, Orsay, France
| | - Daniel Delaruelle
- Faculté des Sciences d’Orsay, Université Paris-Saclay, Orsay, France
| | - Hakima Abes
- Faculté des Sciences d’Orsay, Université Paris-Saclay, Orsay, France
| | - Ana A. Arteni
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Saclay, Gif-sur-Yvette, France
| | - Malika Ouldali
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Saclay, Gif-sur-Yvette, France
| | - Laura Pieri
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Saclay, Gif-sur-Yvette, France
| | - Ryan Afgoun
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Leonor Anacleto
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Nathan Beaure
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Meyssa Beghdad
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Nolwenn Bellom
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | | | - Aïda Boukamel
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - James Carron
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Vincent Carta
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Lauriane Castelneau
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Zoe Chadaillac
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Elsa Chaouat
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Soline Desmat
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Keylian Favel
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Eva Gabillot
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Melissa Gargar
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Madeleine Gautheret
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Esther Gilles
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Claire Lager
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Amandine Le Deit
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Yoann Le vay
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Laure Lemercier
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | | | - Samir Moussi
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Marion Prevot
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Marion Rehala
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Chloë Rodrigues
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Ramatoulaye Sambe
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Ashvini Srimoorthy
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | | | - Cerise Verhoeven
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Pauline Vittaz
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Jacqueline Wu
- Ecole Universitaire de Premier Cycle, Université Paris-Saclay, Orsay, France
| | - Christophe Regeard
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Saclay, Gif-sur-Yvette, France
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Tkacova A, Orieskova M, Halgasova N, Bocanova L, Bukovska G. Identification of Brevibacterium flavum genes related to receptors involved in bacteriophage BFK20 adsorption. Virus Res 2019; 274:197775. [PMID: 31600527 DOI: 10.1016/j.virusres.2019.197775] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2019] [Revised: 08/28/2019] [Accepted: 10/04/2019] [Indexed: 12/27/2022]
Abstract
Phage infection of bacterial cells is a process requiring the interaction between phage receptor binding proteins and receptors on the bacterial cell surface. We prepared a Brevibacterium flavum CCM 251 EZ-Tn5 transposon insertional library and isolated phage-resistant mutants. Analysis of the DNA fragments produced by single-primer PCR was used to determine the EZ-Tn5 transposon insertion sites in the genomes of phage-resistant B. flavum mutants. Seven disrupted genes were identified in forty B. flavum mutants. The phage resistance of these mutants was demonstrated by cultivation analysis in the presence of BFK20, and the adsorption rate of BFK20 to these mutants was tested. B. flavum mutants displayed significantly reduced adsorption rates; the lowest rate was observed for mutants containing interrupted major facilitator superfamily (MFS) protein and glycosyltransferase genes. Uninterrupted forms of these genes were cloned into corynebacterial vector pJUP06 and used for in trans complementation of the corresponding B. flavum mutants. The growth of these complemented mutants when infected with BFK20 closely resembled that of wild-type B. flavum. These complemented mutants also exhibited similar BFK20 adsorption as the wild-type control. We infer that the disrupted MFS protein and glycosyltransferase genes are responsible for the phage-resistant phenotype of these B. flavum transposition mutants.
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Affiliation(s)
- Adela Tkacova
- Department of Genomics and Biotechnology, Institute of Molecular Biology, Slovak Academy of Sciences, Dubravska cesta 21, 845 51, Bratislava, Slovakia
| | - Maria Orieskova
- Department of Genomics and Biotechnology, Institute of Molecular Biology, Slovak Academy of Sciences, Dubravska cesta 21, 845 51, Bratislava, Slovakia
| | - Nora Halgasova
- Department of Genomics and Biotechnology, Institute of Molecular Biology, Slovak Academy of Sciences, Dubravska cesta 21, 845 51, Bratislava, Slovakia
| | - Lucia Bocanova
- Department of Genomics and Biotechnology, Institute of Molecular Biology, Slovak Academy of Sciences, Dubravska cesta 21, 845 51, Bratislava, Slovakia
| | - Gabriela Bukovska
- Department of Genomics and Biotechnology, Institute of Molecular Biology, Slovak Academy of Sciences, Dubravska cesta 21, 845 51, Bratislava, Slovakia.
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Bukovska G, Ugorcakova J, Halgasova N, Bocanova L, Tkacova A. The BFK20 phage replication origin confers a phage-encoded resistance phenotype to the industrial strain Brevibacterium flavum. FEMS Microbiol Lett 2019; 366:5480461. [DOI: 10.1093/femsle/fnz090] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2018] [Accepted: 04/25/2019] [Indexed: 01/21/2023] Open
Affiliation(s)
- Gabriela Bukovska
- Department of Genomics and Biotechnology, Institute of Molecular Biology, Slovak Academy of Sciences, Dubravska cesta 21, 845 51 Bratislava, Slovakia
| | - Jana Ugorcakova
- Department of Genomics and Biotechnology, Institute of Molecular Biology, Slovak Academy of Sciences, Dubravska cesta 21, 845 51 Bratislava, Slovakia
| | - Nora Halgasova
- Department of Genomics and Biotechnology, Institute of Molecular Biology, Slovak Academy of Sciences, Dubravska cesta 21, 845 51 Bratislava, Slovakia
| | - Lucia Bocanova
- Department of Genomics and Biotechnology, Institute of Molecular Biology, Slovak Academy of Sciences, Dubravska cesta 21, 845 51 Bratislava, Slovakia
| | - Adela Tkacova
- Department of Genomics and Biotechnology, Institute of Molecular Biology, Slovak Academy of Sciences, Dubravska cesta 21, 845 51 Bratislava, Slovakia
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