1
|
Frant MP, Mazur-Panasiuk N, Gal-Cisoń A, Bocian Ł, Łyjak M, Szczotka-Bochniarz A. Porcine Circovirus Type 3 (PCV3) in Poland: Prevalence in Wild Boar Population in Connection with African Swine Fever (ASF). Viruses 2024; 16:754. [PMID: 38793635 PMCID: PMC11125846 DOI: 10.3390/v16050754] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Revised: 05/06/2024] [Accepted: 05/07/2024] [Indexed: 05/26/2024] Open
Abstract
Human health is dependent on food safety and, therefore, on the health of farm animals. One of the most significant threats in regard to swine diseases is African swine fever (ASF). Infections caused by porcine circoviruses (PCVs) represent another important swine disease. Due to the ubiquitous nature of PCV2, it is not surprising that this virus has been detected in ASFV-affected pigs. However, recent data indicate that coinfection of PCV3 and ASFV also occurs. It is still unclear whether PCV infection plays a role in ASFV infection, and that subject requires further analysis. The aim of this study was to assess whether PCV3 and PCV4 are present in the wild boar population in Poland (real-time PCR). The analysis was performed on wild boar samples collected for routine ASF surveillance in Poland, between 2018 and 2021. By extension, the obtained data were compared in regard to ASFV presence in these samples, thus investigating the odds of ASFV infection on the grounds of the PCV carrier state in free-ranging Suidae in Poland. In addition, sequencing of PCV3 and phylogenetic analysis were performed, based on a full genome and a capsid gene. In the current study, we demonstrated the high prevalence of PCV3 in the wild boar population in Poland; meanwhile, PCV4 was not detected. The odds of ASFV infection on the grounds of the PCV3 carrier state in free-ranging Suidae in Poland was more than twice as high. Ten full genome sequences of PCV3 were obtained, all of them belonging to clade 3a. The similarity between them was in the range of 98.78-99.80%.
Collapse
Affiliation(s)
- Maciej Piotr Frant
- Department of Swine Diseases, National Veterinary Research Institute, Partyzantów Avenue 57, 24-100 Puławy, Poland; (A.G.-C.); (M.Ł.); (A.S.-B.)
| | - Natalia Mazur-Panasiuk
- Virogenetics Laboratory of Virology, Małopolska Centre of Biotechnology, Jagiellonian University, Gronostajowa 7A, 30-387 Kraków, Poland;
| | - Anna Gal-Cisoń
- Department of Swine Diseases, National Veterinary Research Institute, Partyzantów Avenue 57, 24-100 Puławy, Poland; (A.G.-C.); (M.Ł.); (A.S.-B.)
| | - Łukasz Bocian
- Department of Epidemiology and Risk Assessment, National Veterinary Research Institute, Partyzantów Avenue 57, 24-100 Puławy, Poland;
| | - Magdalena Łyjak
- Department of Swine Diseases, National Veterinary Research Institute, Partyzantów Avenue 57, 24-100 Puławy, Poland; (A.G.-C.); (M.Ł.); (A.S.-B.)
| | - Anna Szczotka-Bochniarz
- Department of Swine Diseases, National Veterinary Research Institute, Partyzantów Avenue 57, 24-100 Puławy, Poland; (A.G.-C.); (M.Ł.); (A.S.-B.)
- Department of Cattle and Sheep Diseases, National Veterinary Research Institute, Partyzantów Avenue 57, 24-100 Puławy, Poland
| |
Collapse
|
2
|
Pegu SR, Deb R, Das PJ, Sengar GS, Yadav AK, Rajkhowa S, Paul S, Gupta VK. Development of multiplex PCR assay for simultaneous detection of African swine fever, porcine circo and porcine parvo viral infection from clinical samples. Anim Biotechnol 2023; 34:1883-1890. [PMID: 35343866 DOI: 10.1080/10495398.2022.2053698] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Abstract
A diagnostic method for simultaneously detecting and distinguishing African Swine Fever (ASF), porcine circovirus type 2 (PCV2), and porcine parvovirus (PPV) in clinical specimens is critical for differential diagnosis, monitoring, and control in the field. Three primer pairs were designed and used to create a multiplex PCR assay. In addition, 356 porcine post mortem tissue samples from various parts of India's North Eastern region were tested by the developed multiplex PCR assay to demonstrate its accuracy. Using the designed primers, each of the ASF, PCV2 and PPV target genes was amplified, but no other porcine virus genes were detected. The assay's limit of detection was 102 copies/µl of PCV2, PPV, or ASFV. The detection of PCV2, PPV, and ASF in postmortem tissue samples revealed that they are co-circulating in India's North-Eastern region. The percentage positivity (PP) for PCV2, PPV and ASF single infection were 7.02% (25/356), 3.93% (14/356), and 3.37% (12/356), respectively, while the PP for PCV2& PPV co-infection was 2.80% (10/356), ASF & PCV2 co infection was 1.4% (5/356) and the ASF, PPV& PCV2 co-infection was1.40% (5/356). The results also indicate that the ASF can infect pigs alongside PCV and PPV.
Collapse
Affiliation(s)
| | - Rajib Deb
- ICAR-National Research Centre on Pig, Guwahati, Assam
| | | | | | | | | | - Souvik Paul
- ICAR-National Research Centre on Pig, Guwahati, Assam
| | | |
Collapse
|
3
|
Buragohain L, Barman NN, Sen S, Bharali A, Dutta B, Choudhury B, Suresh KP, Gaurav S, Kumar R, Ali S, Kumar S, Singh Malik Y. Transmission of African Swine Fever Virus to the Wild Boars of Northeast India. Vet Q 2023; 43:1-10. [PMID: 36786106 PMCID: PMC10124978 DOI: 10.1080/01652176.2023.2178689] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/15/2023] Open
Abstract
BACKGROUND India recorded the first outbreak of African swine fever (ASF) in North-eastern region (NER) in the year 2020. AIM The current study was undertaken to investigate the transmission of African swine fever virus (ASFV) in the wild boars of Northeast India, particularly of Assam. MATERIAL AND METHODS ASF suspected mortal tissue remains and blood samples of wild boars collected from different locations of Assam were screened for molecular detection of swine viruses which includes Classical swine fever virus, Porcine Circovirus 2, Porcine reproductive and respiratory syndrome virus and ASFV. RESULTS One sample each from Manas and Nameri National Parks were detected positive for ASFV. Besides this, one of the samples was positive for CSFV and one of the ASFV positive samples was also positive for PCV2. Several striking gross and microscopic alterations were noticed in different organs of ASFV infected animals. Sequencing and phylogenetic analysis of B646L gene confirmed the presence of ASFV genotype-II in wild boars. Circulation of similar genotype in domestic pigs of NER in the contemporary period as well as locations near to the aforementioned national parks indicates the transmission of ASFV from domestic to wild boars. CLINICAL RELEVANCE The detection of ASFV in the wild boars of Assam is alarming as it is an impending threat to pig population and other endangered species (particularly Pygmy hog), making it increasingly daunting to control the disease. CONCLUSION Chances are high for ASFV to become endemic in Assam region if stringent measures are not taken at proper time.
Collapse
Affiliation(s)
- Lukumoni Buragohain
- College of Veterinary Science, Assam Agricultural University, Guwahati, Assam, India
| | - Nagendra Nath Barman
- College of Veterinary Science, Assam Agricultural University, Guwahati, Assam, India
| | - Suparna Sen
- College of Veterinary Science, Assam Agricultural University, Guwahati, Assam, India
| | - Arpita Bharali
- College of Veterinary Science, Assam Agricultural University, Guwahati, Assam, India
| | - Biswajit Dutta
- College of Veterinary Science, Assam Agricultural University, Guwahati, Assam, India
| | | | | | | | - Rakesh Kumar
- Indian Institute of Technology, Guwahati, Assam, India
| | - Samsul Ali
- Wildlife Trust of India, CWRC, Kaziranga, Assam, India
| | - Sachin Kumar
- Indian Institute of Technology, Guwahati, Assam, India
| | - Yashpal Singh Malik
- College of Animal Biotechnology, Guru Angad Dev Veterinary and Animal Sciences University, Ludhiana, Punjab, India
| |
Collapse
|
4
|
Luka PD, Adedeji AJ, Jambol AR, Ifende IV, Luka HG, Choji ND, Weka R, Settypalli TBK, Achenbach JE, Cattoli G, Lamien CE, Molini U, Franzo G, Dundon WG. Coinfections of African swine fever virus, porcine circovirus 2 and 3, and porcine parvovirus 1 in swine in Nigeria. Arch Virol 2022; 167:2715-2722. [PMID: 36138234 DOI: 10.1007/s00705-022-05593-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Accepted: 08/05/2022] [Indexed: 12/14/2022]
Abstract
As pig production increases in Africa, it is essential to identify the pathogens that are circulating in the swine population to assess pig welfare and implement targeted control measures. For this reason, DNA samples collected from pigs in Nigeria in the context of African swine fever monitoring were further screened by PCR for porcine circovirus 2 (PCV-2), porcine circovirus 3 (PCV-3), and porcine parvovirus 1 (PPV1). Forty-seven (45%) pigs were positive for two or more pathogens. Sequence analysis identified PCV-2 genotypes a, b, and d, while limited genetic heterogenicity was observed among PCV-3 strains. All except one of the PPV1 sequences were genetically distinct from those previously identified in other countries.
Collapse
Affiliation(s)
| | | | - Anvou R Jambol
- National Veterinary Institute, Vom, Plateau State, Nigeria
| | | | - Helen G Luka
- National Veterinary Institute, Vom, Plateau State, Nigeria
| | - Nyam D Choji
- National Veterinary Institute, Vom, Plateau State, Nigeria
| | - Rebecca Weka
- National Veterinary Institute, Vom, Plateau State, Nigeria
| | - Tirumala B K Settypalli
- Animal Production and Health Laboratory, Animal Production and Health Section, Joint FAO/IAEA Division, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, PO Box 100, 1400, Vienna, Austria
| | | | - Giovanni Cattoli
- Animal Production and Health Laboratory, Animal Production and Health Section, Joint FAO/IAEA Division, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, PO Box 100, 1400, Vienna, Austria
| | - Charles E Lamien
- Animal Production and Health Laboratory, Animal Production and Health Section, Joint FAO/IAEA Division, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, PO Box 100, 1400, Vienna, Austria
| | - Umberto Molini
- School of Veterinary Medicine, Faculty of Health Sciences and Veterinary Medicine, University of Namibia, Neudamm Campus, Private Bag 13301, Windhoek, Namibia.,Central Veterinary Laboratory (CVL), 24 Goethe Street, Private Bag 18137, Windhoek, Namibia
| | - Giovanni Franzo
- Dept. of Animal Medicine, Production and Health, University of Padova, Legnaro, viale dell'Università 16, 35020, Padova, Italy
| | - William G Dundon
- Animal Production and Health Laboratory, Animal Production and Health Section, Joint FAO/IAEA Division, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, PO Box 100, 1400, Vienna, Austria. .,Animal Production and Health Laboratory, IAEA, Friedenstrasse, 1, 2444, Seibersdorf, Austria.
| |
Collapse
|
5
|
Assavacheep P, Thanawongnuwech R. Porcine respiratory disease complex: Dynamics of polymicrobial infections and management strategies after the introduction of the African swine fever. Front Vet Sci 2022; 9:1048861. [PMID: 36504860 PMCID: PMC9732666 DOI: 10.3389/fvets.2022.1048861] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2022] [Accepted: 11/14/2022] [Indexed: 11/27/2022] Open
Abstract
A few decades ago, porcine respiratory disease complex (PRDC) exerted a major economic impact on the global swine industry, particularly due to the adoption of intensive farming by the latter during the 1980's. Since then, the emerging of porcine reproductive and respiratory syndrome virus (PRRSV) and of porcine circovirus type 2 (PCV2) as major immunosuppressive viruses led to an interaction with other endemic pathogens (e.g., Mycoplasma hyopneumoniae, Actinobacillus pleuropneumoniae, Streptococcus suis, etc.) in swine farms, thereby exacerbating the endemic clinical diseases. We herein, review and discuss various dynamic polymicrobial infections among selected swine pathogens. Traditional biosecurity management strategies through multisite production, parity segregation, batch production, the adoption of all-in all-out production systems, specific vaccination and medication protocols for the prevention and control (or even eradication) of swine diseases are also recommended. After the introduction of the African swine fever (ASF), particularly in Asian countries, new normal management strategies minimizing pig contact by employing automatic feeding systems, artificial intelligence, and robotic farming and reducing the numbers of vaccines are suggested. Re-emergence of existing swine pathogens such as PRRSV or PCV2, or elimination of some pathogens may occur after the ASF-induced depopulation. ASF-associated repopulating strategies are, therefore, essential for the establishment of food security. The "repopulate swine farm" policy and the strict biosecurity management (without the use of ASF vaccines) are, herein, discussed for the sustainable management of small-to-medium pig farms, as these happen to be the most potential sources of an ASF re-occurrence. Finally, the ASF disruption has caused the swine industry to rapidly transform itself. Artificial intelligence and smart farming have gained tremendous attention as promising tools capable of resolving challenges in intensive swine farming and enhancing the farms' productivity and efficiency without compromising the strict biosecurity required during the ongoing ASF era.
Collapse
Affiliation(s)
- Pornchalit Assavacheep
- Department of Veterinary Medicine, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, Thailand,*Correspondence: Pornchalit Assavacheep
| | - Roongroje Thanawongnuwech
- Department of Pathology, Faculty of Veterinary Science, Chulalongkorn University, Bangkok, Thailand,Faculty of Veterinary Science, Center of Emerging and Re-emerging Infectious Diseases in Animals, Chulalongkorn University, Bangkok, Thailand,Roongroje Thanawongnuwech
| |
Collapse
|