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Le Thi Hong H, Le Phuong T, Van Pham T, Minh Thi Nguyen H, Van Meervelt L. Unusual reaction of ( E)-2-[(benzo[ d]thia-zol-2-yl-imino)-meth-yl]-5-(di-ethyl-amino)-phenol with tri-phenyl-borane: crystal structures and optical properties. Acta Crystallogr E Crystallogr Commun 2023; 79:982-987. [PMID: 37936854 PMCID: PMC10626958 DOI: 10.1107/s2056989023008514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Accepted: 09/27/2023] [Indexed: 11/09/2023]
Abstract
The mol-ecular and crystal structure of (E)-2-[(benzo[d]thia-zol-2-yl-imino)-meth-yl]-5-(di-ethyl-amino)-phenol (C18H19N3O2S, Et2N-Bz) and its unexpected reaction product with tri-phenyl-borane, 2,2-diphenyl-1,3-dioxa-2-borata-1,2-di-hydro-naphthalene [systematic name: N,N-diethyl-2,2-diphenyl-2H-1,3λ3,2λ4-ben-zodioxaborinin-7-amine, C23H24BNO2, (I)] are described. For Et2N-Bz, the hydroxyl group is involved in an intra-molecular hydrogen bond with the imino nitro-gen atom and the C=N bond displays an E configuration. The crystal packing is characterized by layers of inversion dimers parallel to the (10) plane and chains of mol-ecule in the a-axis direction formed through C-H⋯O inter-actions. Complex (I) crystallizes with two mol-ecules (A and B) in the asymmetric unit, which differ in the orientation of the ethyl groups. The 1,3-dioxa-2-borata-1,2,3,4-tetra-hydro-naphthalene ring displays a slight envelope conformation with the boron atom as the flap. In the crystal packing, chains of alternating A and B mol-ecules formed by C-H⋯O hydrogen bonds run in the b-axis direction. The UV-vis absorption and emission properties of the compounds are discussed and their aggregation-induced emission properties are further investigated.
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Affiliation(s)
- Hai Le Thi Hong
- Department of Chemistry, Hanoi National University of Education, 136 Xuan Thuy, Cau Giay, Hanoi, Vietnam
| | - Thao Le Phuong
- Department of Chemistry, Hanoi National University of Education, 136 Xuan Thuy, Cau Giay, Hanoi, Vietnam
| | - Thong Van Pham
- Department of Chemistry, Hanoi National University of Education, 136 Xuan Thuy, Cau Giay, Hanoi, Vietnam
| | - Hue Minh Thi Nguyen
- Department of Chemistry, Hanoi National University of Education, 136 Xuan Thuy, Cau Giay, Hanoi, Vietnam
| | - Luc Van Meervelt
- Department of Chemistry, KU Leuven, Biomolecular Architecture, Celestijnenlaan 200F, Leuven (Heverlee), B-3001, Belgium
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Padilla-Martínez II, Cruz A, García-Báez EV, Rosales-Hernández MC, Mendieta Wejebe JE. N-substitution Reactions of 2-Aminobenzimidazoles to Access Pharmacophores. Curr Org Synth 2023; 20:177-219. [PMID: 35272598 DOI: 10.2174/1570179419666220310124223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2021] [Revised: 12/22/2021] [Accepted: 12/31/2021] [Indexed: 11/22/2022]
Abstract
Benzimidazole (BI) and its derivatives are interesting molecules in medicinal chemistry because several of these compounds have a diversity of biological activities and some of them are even used in clinical applications. In view of the importance of these compounds, synthetic chemists are still interested in finding new procedures for the synthesis of these classes of compounds. Astemizole (antihistaminic), Omeprazole (antiulcerative), and Rabendazole (fungicide) are important examples of compounds used in medicinal chemistry containing BI nuclei. It is interesting to observe that several of these compounds contain 2-aminobenzimidazole (2ABI) as the base nucleus. The structures of 2ABI derivatives are interesting because they have a planar delocalized structure with a cyclic guanidine group, which have three nitrogen atoms with free lone pairs and labile hydrogen atoms. The 10-π electron system of the aromatic BI ring conjugated with the nitrogen lone pair of the hexocyclic amino group, making these heterocycles to have an amphoteric character. Synthetic chemists have used 2ABI as a building block to produce BI derivatives as medicinally important molecules. In view of the importance of the BIs, and because no review was found in the literature about this topic, we reviewed and summarized the procedures related to the recent methodologies used in the N-substitution reactions of 2ABIs by using aliphatic and aromatic halogenides, dihalogenides, acid chlorides, alkylsulfonic chlorides, carboxylic acids, esters, ethyl chloroformates, anhydrides, SMe-isothioureas, alcohols, alkyl cyanates, thiocyanates, carbon disulfide and aldehydes or ketones to form Schiff bases. The use of diazotized 2ABI as intermediate to obtain 2-diazoBIs was included to produce Nsubstituted 2ABIs of pharmacological interest. Some commentaries about their biological activity were included.
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Affiliation(s)
- Itzia I Padilla-Martínez
- Laboratorio de Química Supramolecular y Nanociencias, Instituto Politécnico Nacional UPIBI, Av. Acueducto s/n, Barrio la Laguna Ticomán, Ciudad de México, 07340, Mexico
| | - Alejandro Cruz
- Laboratorio de Química Supramolecular y Nanociencias, Instituto Politécnico Nacional UPIBI, Av. Acueducto s/n, Barrio la Laguna Ticomán, Ciudad de México, 07340, Mexico
| | - Efrén V García-Báez
- Laboratorio de Química Supramolecular y Nanociencias, Instituto Politécnico Nacional UPIBI, Av. Acueducto s/n, Barrio la Laguna Ticomán, Ciudad de México, 07340, Mexico
| | - Martha C Rosales-Hernández
- Laboratorio de Biofísica y Biocatálisis, Sección de Estudios de Posgrado e Investigación, Escuela Superior de Medicina, Instituto Politécnico Nacional, Plan de San Luis y Salvador Díaz Mirón s/n, Casco de Santo Tomás, Distrito Federal 11340, México
| | - Jessica E Mendieta Wejebe
- Laboratorio de Biofísica y Biocatálisis, Sección de Estudios de Posgrado e Investigación, Escuela Superior de Medicina, Instituto Politécnico Nacional, Plan de San Luis y Salvador Díaz Mirón s/n, Casco de Santo Tomás, Distrito Federal 11340, México
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Sović I, Jambon S, Kraljević Pavelić S, Markova-Car E, Ilić N, Depauw S, David-Cordonnier MH, Karminski-Zamola G. Synthesis, antitumor activity and DNA binding features of benzothiazolyl and benzimidazolyl substituted isoindolines. Bioorg Med Chem 2018. [DOI: 10.1016/j.bmc.2018.02.045] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Dadmal TL, Katre SD, Mandewale MC, Kumbhare RM. Contemporary progress in the synthesis and reactions of 2-aminobenzothiazole: a review. NEW J CHEM 2018. [DOI: 10.1039/c7nj03776g] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Various protocols for the synthesis and reactions of 2-aminobenzothiazole.
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Affiliation(s)
- Tulshiram L. Dadmal
- Department of Chemistry
- Government of Maharashtra's
- Ismail Yusuf College
- Mumbai 400060
- India
| | - Sangita D. Katre
- Department of Chemistry
- Chhotabhai Javerbhai Patel College
- Gondia 441911
- India
| | - Mustapha C. Mandewale
- Department of Chemistry
- Government of Maharashtra's
- Ismail Yusuf College
- Mumbai 400060
- India
| | - Ravindra M. Kumbhare
- Fluoroorganics Division
- Indian Institute of Chemical Technology
- Hyderabad 500607
- India
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Dazie JD, Liška A, Ludvík J, Fábry J, Dušek M, Eigner V. Planarity of substituted pyrrole and furan rings in (3 R*, 1′ S*, 3′ R*)-3-(1′- tert-butylamino-1′ H, 3′ H-benzo[ c]furan-3′-yl)-2- tert-butyl-2,3-dihydro-1 H-benzo[ c]pyrrol-1-one. Z KRIST-CRYST MATER 2017. [DOI: 10.1515/zkri-2016-2001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
The title structure, (3R*, 1′S*, 3′R*)-3-(1′-tert-butylamino-1′H,3′H-benzo[c]furan-3′-yl)-2-tert-butyl-2,3-dihydro-1H-benzo[c]pyrrol-1-one has been determined at 290 and 150 K by single-crystal X-ray diffraction. The structure comprises two symmetry independent molecules with very similar conformations which differ mostly by orientations of the tert-butyl groups, situated at the periphery of these molecules. The molecules are composed of two parts, the cores of which are isoindolinone and isobenzofuran rings being bound by C–C bonds. The planarities of the pyrrolone and furan rings are compared with the known structures retrieved from the Cambridge Crystal Structure Database. It transpires in the title molecules, the planarity of the carbonyl-substituted pyrrole rings is exceptionally distorted in contrast to the furan rings. This fact is just the opposite of the tendency inferred from the Cambridge Crystal Structure Database. The reason may be the influence of the voluminous tert-butyl group which is attached to the nitrogen of the pyrrole group, as well as short centroid–centroid distances between the carbonyl-substituted pyrrole and furan rings. Cohesion forces between the molecules and their parts are provided by weak interactions only: The packing suggests C–H···O, π–π-electron ring interactions, N–H···π-electron ring as well as C–H···π-electron ring interactions. The structure determination of the title compound, the product of the reaction of o-phthalaldehyde with tert-butylamine, has provided indication about the mechanism of a chemical reaction which resulted in the formation of the title molecule.
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Affiliation(s)
- Joel Donkeng Dazie
- J. Heyrovsky Institute of Physical Chemistry, Academy of Sciences of the Czech Republic , Dolejškova 2155/3 , 182 23 Prague 8 , Czech Republic
- University of Chemistry and Technology , Technická 5 , 166 28 Prague 6 , Czech Republic
| | - Alan Liška
- J. Heyrovsky Institute of Physical Chemistry, Academy of Sciences of the Czech Republic , Dolejškova 2155/3 , 182 23 Prague 8 , Czech Republic
- Department of Inorganic Chemistry, Faculty of Science , Charles University in Prague , Hlavova 2030 , 128 40 Praha 2 , Czech Republic
| | - Jiří Ludvík
- J. Heyrovsky Institute of Physical Chemistry, Academy of Sciences of the Czech Republic , Dolejškova 2155/3 , 182 23 Prague 8 , Czech Republic
- University of Chemistry and Technology , Technická 5 , 166 28 Prague 6 , Czech Republic
| | - Jan Fábry
- Institute of Physics, Academy of Sciences of the Czech Repulic , Na Slovance 2 , 182 21 Praha 8 , Czech Republic
| | - Michal Dušek
- Institute of Physics, Academy of Sciences of the Czech Repulic , Na Slovance 2 , 182 21 Praha 8 , Czech Republic
| | - Václav Eigner
- Institute of Physics, Academy of Sciences of the Czech Repulic , Na Slovance 2 , 182 21 Praha 8 , Czech Republic
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