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Soni A, Kumar A, Kumar V, Rawat R, Eyupoglu V. Design, synthesis and evaluation of aminothiazole derivatives as potential anti-Alzheimer's candidates. Future Med Chem 2024; 16:513-529. [PMID: 38375588 DOI: 10.4155/fmc-2023-0290] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2023] [Accepted: 01/26/2024] [Indexed: 02/21/2024] Open
Abstract
Aim: The objective of the present study was to design, synthesize and evaluate diverse Schiff bases and thiazolidin-4-one derivatives of aminothiazole as key pharmacophores possessing acetylcholinesterase inhibitory activity. Materials & methods: Two series of compounds (13 each) were synthesized and evaluated for their acetylcholinesterase inhibition and antioxidant activity. Molecular docking of all compounds was performed to provide an insight into their binding interactions. Results: Compounds 2j (IC50 = 0.03 μM) and 3e (IC50 = 1.58 μM) were found to be the best acetylcholinesterase inhibitors among compounds of their respective series. Molecular docking analysis supported the results of in vitro activity by displaying good docking scores with the binding pocket of human acetylcholinesterase (Protein Data Bank ID: 4EY7). Conclusion: Compound 2j emerged as a potential lead compound with excellent acetylcholinesterase inhibition, antioxidant and chelation activity.
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Affiliation(s)
- Arti Soni
- Department of Pharmaceutical Sciences, Guru Jambheshwar University of Science & Technology, Hisar, 125001, Haryana, India
| | - Ashwani Kumar
- Department of Pharmaceutical Sciences, Guru Jambheshwar University of Science & Technology, Hisar, 125001, Haryana, India
| | - Vivek Kumar
- Janta College of Pharmacy, Butana, (Sonipat), 131001, Haryana, India
| | - Ravi Rawat
- School of Health Sciences & Technology, UPES University, Dehradun, 248007, India
| | - Volkan Eyupoglu
- Department of Chemistry, Cankırı Karatekin University, Cankırı, 18100, Turkey
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2
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Dudure R, Joshi R, Pritam P, Panda AK, Jadhao M. Probing the interaction and aggregation of lysozyme in presence of organophosphate pesticides: a comprehensive spectroscopic, calorimetric, and in-silico investigation. J Biomol Struct Dyn 2023; 42:10922-10936. [PMID: 37728535 DOI: 10.1080/07391102.2023.2259484] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Accepted: 08/31/2023] [Indexed: 09/21/2023]
Abstract
Organophosphorus pesticides (OPs) are widely used in agriculture and may contaminate food or water, leading to potential health risks. However, there are few reports on the effect of OPs on protein conformation and aggregation. Hence, in this paper, we have characterized the impact of two OPs, chlorpyrifos (CPF) and methyl parathion (Para), on the model protein HEWL using biophysical and computational methods. The steady-state and time-resolved spectroscopy, Circular dichroism (CD), molecular dynamics simulation, and isothermal titration calorimetry were employed to investigate the binding interactions between HEWL and OPs. The steady-state and time-resolved fluorescence spectroscopy confirm the presence of both static and dynamic quenching between OPs and proteins. Based on fluorescence, MD, and CD results, it was found that the OPs not only show strong binding but also destabilize the protein structure and alter the secondary and tertiary structure of the protein. The molecular docking results showed that OPs entered the binding pocket of the HEWL molecule and interacted through hydrophobic and hydrogen bond interactions. The thermodynamic studies indicated that the binding was spontaneous and OPs have shown an effect on the aggregation process of HEWL. Finally, the protein aggregation process was studied using fluorescence and SDS-PAGE studies in the presence of both the OPs and found to enhance the aggregation process in the presence of OPs. These results provide insights into the potential health risks associated with OPs and highlight the importance of understanding their interactions with biological macromolecules.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Rushali Dudure
- Institute of Chemical Technology Mumbai Marathwada Campus Jalna, Jalna, India
| | - Ritika Joshi
- Institute of Chemical Technology Mumbai Marathwada Campus Jalna, Jalna, India
| | - Pulak Pritam
- Environmental Science Laboratory, School of Applied Sciences, KIIT Deemed to be University, Patia, Bhubaneswar, India
| | - Alok Kumar Panda
- Environmental Science Laboratory, School of Applied Sciences, KIIT Deemed to be University, Patia, Bhubaneswar, India
| | - Manojkumar Jadhao
- Institute of Chemical Technology Mumbai Marathwada Campus Jalna, Jalna, India
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3
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Dudure R, Ganorkar K, Beldar V, Ghosh SK, Panda AK, Jadhao M. Effect of artificial sweetener saccharin on lysozyme aggregation: A combined spectroscopic and in silico approach. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2023; 290:122269. [PMID: 36566534 DOI: 10.1016/j.saa.2022.122269] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2022] [Revised: 12/11/2022] [Accepted: 12/18/2022] [Indexed: 06/17/2023]
Abstract
The use of saccharin in food products attracts much attention as it involves the risk of lethal allergies and many protein aggregation diseases. However, its role in protein aggregation has not been explored to date. This study embodies the effect of artificial sweeteners on HEWL in the absence and presence of commonly available natural products such as curcumin and EGCG. Various techniques have been used to characterize the protein interaction, such as steady-state emission and time-resolved fluorescence, FTIR, gel electrophoresis, TEM, and molecular docking. Steady-state and time-resolved studies revealed the binding strength and concomitant effect of saccharin on HEWL protein. Kinetic measurements revealed that saccharin causes significant enhancement of HEWL aggregation with a considerable reduction in lag phase time i.e. from 37 hr to 08 hr. Whereas in the presence of natural products, the effect of saccharin on HEWL aggregation was significantly reduced specifically in the case of curcumin. The result obtained in the fluorescence experiment were also supported by the gel electrophoresis technique and morphological images taken by TEM. The rapid change in the secondary structure of the protein in the presence of saccharin was confirmed by the FTIR spectroscopy technique. This study is instrumental in understanding the effect of saccharin on protein aggregation and the role of commonly available natural products in curbing its effect.
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Affiliation(s)
- Rushali Dudure
- Institute of Chemical Technology Mumbai-Marathwada Campus, Jalna, Maharashtra 431203, India
| | - Kapil Ganorkar
- Department of Chemistry, Visvesvaraya National Institute of Technology, Nagpur, Maharashtra 440010, India
| | - Vishal Beldar
- Institute of Chemical Technology Mumbai-Marathwada Campus, Jalna, Maharashtra 431203, India
| | - Sujit Kumar Ghosh
- Department of Chemistry, Visvesvaraya National Institute of Technology, Nagpur, Maharashtra 440010, India
| | - Alok Kumar Panda
- Environmental Science Laboratory, School of Applied Sciences, KIIT Deemed to be University, Bhubaneswar, Odisha 751 024, India
| | - Manojkumar Jadhao
- Institute of Chemical Technology Mumbai-Marathwada Campus, Jalna, Maharashtra 431203, India.
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4
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Unraveling the Pharmaceutical Benefits of Freshly Prepared Amino Acid-Based Schiff Bases Via DFT, In Silico Molecular Docking and ADMET. J Fluoresc 2022; 32:1873-1888. [PMID: 35749028 DOI: 10.1007/s10895-022-02987-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2021] [Accepted: 05/31/2022] [Indexed: 10/17/2022]
Abstract
A series of amino acid-based Schiff bases have been synthesized using a facile condensation between benzil (a diketone) and amino acid in the presence of a base. The formation of Schiff base compounds has been ensured by elemental analysis, FT-IR, 1H-NMR, 13C-NMR and UV-Vis. spectra. Density Functional Theory (DFT) calculations have been explored in order to get intuition into the molecular structure and chemical reactivity of the compounds. The DFT, optimized structure of the compounds, has been used to attain the molecular docking studies with DNA structure to find the favorable mode of interaction. In silico ADME/Tox profile of the compounds has been predicted using pkCSM web tools, exhibiting suitable values of absorption, distribution, and metabolism. These obtained parameters are connected to bioavailability. In addition, toxicity, skin sensitization and cardiotoxicity (hERG) analysis have been performed for evaluating the drug-like character of the prepared Schiff bases. The findings obtained from this study may find applications in the field focusing on the production of efficient and harmless pharmacological drugs.
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Pothulapadu CAS, Jayaraj A, N S, Priyanka RN, Sivaraman G. Novel Benzothiazole-Based Highly Selective Ratiometric Fluorescent Turn-On Sensors for Zn 2+ and Colorimetric Chemosensors for Zn 2+, Cu 2+, and Ni 2+ Ions. ACS OMEGA 2021; 6:24473-24483. [PMID: 34604629 PMCID: PMC8482408 DOI: 10.1021/acsomega.1c02855] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Indexed: 05/17/2023]
Abstract
Metal ions play a very important role in environmental as well as biological fields. The detection of specific metal ions at a minute level caught much attention, and hence, several probes are available in the literature. Even though benzothiazole-based molecules have a special place in the medicinal field, only very few chemosensors are reported based on this moiety. The current work describes the design and synthesis of the benzothiazole-based chemosensor for a highly selective and sensitive detection of biologically important metal ions such as Zn2+, Cu2+, and Ni2+. The sensing studies of compound-1 showed a ratiometric as well as colorimetric response toward Zn2+, Cu2+, and Ni2+ ions and color changes from colorless to yellow and is found to be insensitive toward various metal ions (Cd2+, Cr3+, Mn2+, Pb2+, Ba2+, Al3+, Ca2+, Fe2+, Fe3+, Mg2+, K+, and Na+). Further, compound-1 exhibited ratiometric as well as turn-on-enhanced fluorescence response toward Zn2+ ions and turn off response for Cu2+ and Ni2+ ions. The Job plots revealed that the binding stoichiometry of compound-1 and metal ions is 2:1. The detection limits were found to be 0.25 ppm for Zn2+, while it was 0.30 ppm and 0.34 ppm for Ni2+ and Cu2+, respectively. In addition, density functional theory results strongly support the colorimetric response of metals, and the reversibility studies suggested that compound-1 can be used as a powerful chemosensor for the detection of Zn2+, Cu2+, and Ni2+ ions. The bioimaging data illustrated that compound-1 is a very effective ratiometric sensor for Zn2+ ions in live cells.
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Affiliation(s)
- Chinna Ayya Swamy Pothulapadu
- Main
Group Organometallics Materials, Supramolecular Chemistry and Catalysis
Lab, Department of Chemistry, National Institute
of Technology, Calicut 673601, India
| | - Anjitha Jayaraj
- Main
Group Organometallics Materials, Supramolecular Chemistry and Catalysis
Lab, Department of Chemistry, National Institute
of Technology, Calicut 673601, India
| | - Swathi N
- Maharani
Lakshmi Ammanni College for Women (Autonomous), Bangalore 560012, India
| | - Ragam N. Priyanka
- School
of Chemical Sciences, Mahatma Gandhi University, Kottayam 686560, India
| | - Gandhi Sivaraman
- Department
of Chemistry, Gandhigram Rural Institute
(Deemed to be University), Gandhigram 624302, India
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Shi J, Zhou Y, Wang K, Ma Q, Wei R, Li Q, Zhao Y, Qiao Z, Liu S, Leng Y, Liu W, Sang Z. Design, synthesis and biological evaluation of Schiff’s base derivatives as multifunctional agents for the treatment of Alzheimer’s disease. Med Chem Res 2020. [DOI: 10.1007/s00044-020-02666-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Zehra S, Shavez Khan M, Ahmad I, Arjmand F. New tailored substituted benzothiazole Schiff base Cu(II)/Zn(II) antitumor drug entities: effect of substituents on DNA binding profile, antimicrobial and cytotoxic activity. J Biomol Struct Dyn 2018; 37:1863-1879. [DOI: 10.1080/07391102.2018.1467794] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
- Siffeen Zehra
- Department of Chemistry, Aligarh Muslim University , Aligarh
202002, Uttar Pradesh, India
| | - Mohammad Shavez Khan
- Department of Agricultural Microbiology, Aligarh Muslim University , Aligarh
202002, Uttar Pradesh, India
| | - Iqbal Ahmad
- Department of Agricultural Microbiology, Aligarh Muslim University , Aligarh
202002, Uttar Pradesh, India
| | - Farukh Arjmand
- Department of Chemistry, Aligarh Muslim University , Aligarh
202002, Uttar Pradesh, India
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