The formation of endo-complexes between calixarenes and amines—a reinvestigation

Association Complexes of Calix[6]arenes with Amino Acids Explained by Energy-Partitioning Methods

Intermolecular complexes with calixarenes are intriguing because of multiple possibilities of noncovalent binding for both polar and nonpolar molecules, including docking in the calixarene cavity. In this contribution calix[6]arenes interacting with amino acids are studied with an additional aim to show that tools such as symmetry-adapted perturbation theory (SAPT), functional-group SAPT (F-SAPT), and systematic molecular fragmentation (SMF) methods may provide explanations for different numbers of noncovalent bonds and of their varying strength for various calixarene conformers and guest molecules. The partitioning of the interaction energy provides an easy way to identify hydrogen bonds, including those with unconventional hydrogen acceptors, as well as other noncovalent bonds, and to find repulsive destabilizing interactions between functional groups. Various other features can be explained by energy partitioning, such as the red shift of an IR stretching frequency for some hydroxy groups, which arises from their attraction to the phenyl ring of calixarene. Pairs of hydrogen bonds and other noncovalent bonds of similar magnitude found by F-SAPT explain an increase in the stability of both inclusion and outer complexes.

4-Sulfocalix[4]arene/Cucurbit[7]uril-Based Supramolecular Assemblies through the Outer Surface Interactions of Cucurbit[n]uril

Upon mixing of aqueous solutions of the freely soluble building blocks cucurbit[7]uril (Q[7]) and 4-sulfocalix[4]arene (SC[4]A), white microcrystals instantly separate in near-quantitative yield. The driving force for this assembly is suggested to be the outer-surface interaction of the Q[n]. Dynamic light scattering, scanning electron microscopy, and NMR (diffusion-ordered NMR spectroscopy) analyses have confirmed the supramolecular aggregation of Q[7] and SC[4]A. Titration ¹H NMR spectroscopy and isothermal titration calorimetry have shown that the interaction ratio of Q[7] and SC[4]A is close to 3:1. Moreover, the Q[7]/SC[4]A-based supramolecular assembly can accommodate molecules of some volatile compounds or luminescent dyes. Thus, this work offers a simple and highly efficient means of preparing adsorbent or solid fluorescent materials.

Host-guest complexes of mixed glycol-bipyridine cryptands: prediction of ion selectivity by quantum chemical calculations, part V

The selectivity of the cryptands [2.2.bpy] and [2.bpy.bpy] for the endohedral complexation of alkali, alkaline-earth and earth metal ions was predicted on the basis of the DFT (B3LYP/LANL2DZp) calculated structures and complex-formation energies. The cavity size in both cryptands lay between that for [2.2.2] and [bpy.bpy.bpy], such that the complexation of K(+), Sr(2+) and Tl(3+) is most favorable. While the [2.2.bpy] is moderately larger, preferring Rb(+) complexation and demonstrating equal priority for Sr(2+) and Ba(2+), the slightly smaller [2.bpy.bpy] yields more stable cryptates with Na(+) and Ca(2+). Although the CH2-units containing molecular bars fixed at the bridgehead nitrogen atoms determine the flexibility of the cryptands, the twist angles associated with the bipyridine and glycol building blocks also contribute considerably.

Encapsulation of Ar(n) complexes by calix[4]arene: endo- vs. exo-complexes

The structure of the calix[4]arene(C4A)-Ar(n) complexes has been investigated by laser induced fluorescence spectroscopy, mass-selected resonant two-color two-photon ionization (2C-R2PI) spectroscopy, fragment detected IR photodissociation (FDIRPD) spectroscopy, and high level first principles electronic structure calculations at the MP2 and CCSD(T) levels of theory. C4A has a very high ability to form van der Waals complexes with rare gas atoms. For the C4A-Ar dimer two isomers are observed. A major species shows a 45 cm(-1) red-shift of its band origin with respect to the monomer, while that of a minor species is 60 cm(-1). The binding energy of the major species is determined to be in the range of 350-2250 cm(-1) from 2C-R2PI spectroscopy and FDIRPD spectroscopy. Two isomers are also identified in the quantum chemical calculations, depending on whether the Ar atom resides inside (endo) or outside (exo) the C4A. We propose a scheme to derive CCSD(T)/Complete Basis Set (CBS) quality binding energies for the C4A-Ar complex based on CCSD(T) calculations with smaller basis sets and the ratio of CCSD(T)/MP2 energies for the smaller model systems benzene-Ar and phenol-Ar, for which the CCSD(T) level of theory converges to the experimentally determined binding energies. Our best computed estimates for the binding energies of the C4A-Ar endo- and endo-complexes at the CCSD(T)/CBS level of theory are 1560 cm(-1) and 510 cm(-1), respectively. For the C4A-Ar(2) trimer the calculations support the existence of two nearly isoenergetic isomers: one is the {2 : 0} endo-complex, in which the Ar(2) dimer is encapsulated inside the C4A cavity, and the other is the {1 : 1} endo-exo-complex, in which one Ar resides inside and the other outside the C4A cavity. However, the experimental evidence strongly suggests that the observed species is the {2 : 0} endo-complex. The endo structural motif is also suggested for the larger C4A-Ar(n) complexes because of the observed systematic red-shifts of the complexes with the number of bound Ar atoms suggesting that the Ar(n) complex is encapsulated inside the C4A cavity. The formation of the endo-complex structures is attributed to the anisotropy of the interaction with C4A during the complex formation in the expansion region.

On the relative stabilities of the alkali cations 222 cryptates in the gas phase and in water-methanol solution

The relative stabilities of the alkali [M subset 222]+ cryptates (M = Na, K, Rb and Cs) in the gas phase and in solution (80:20 v/v methanol:water mixture) at 298 K, are computed using a combination of ab initio quantum-chemical calculations (HF/6-31G and MP2/6-31+G*//HF/6-31+G*) and explicit-solvent Monte Carlo free-energy simulations. The results suggest that the relative stabilities of the cryptates in solution are due to a combination of steric effects (compression of large ions within the cryptand cavity), electronic effects (delocalization of the ionic charge onto the cryptand atoms) and solvent effects (dominantly the ionic dessolvation penalty). Thus, the relative stabilities in solution cannot be rationalized solely on the basis of a simple match or mismatch between the ionic radius and the cryptand cavity size as has been suggested previously. For example, although the [K subset 222]+ cryptate is found to be the most stable in solution, in agreement with experimental data, it is the [Na subset 222]+ cryptate that is the most stable in the gas phase. The present results provide further support to the notion that the solvent in which supramolecules are dissolved plays a key role in modulating molecular recognition processes.

Ligand-Exchange Processes on Solvated Lithium Cations: DMSO and Water/DMSO Mixtures

Solutions of LiClO(4) in solvent mixtures consisting of dimethylsulfoxide (DMSO) and water, or DMSO and gamma-butyrolactone, were studied by (7)Li NMR spectroscopy (for complexation by cryptands in gamma-butyrolactone as a solvent, see: E. Pasgreta, R. Puchta, M. Galle, N. J. R. van Eikema Hommes, A. Zahl, R. van Eldik, J. Incl. Phen., 2007, 58, 81-88). Chemical shifts indicate that the Li(+) ion is coordinated by four DMSO molecules. In the binary solvent mixture of water and DMSO, no selective solvation is detected, thus indicating that on increasing the water content of the solvent mixture, DMSO is gradually displaced by water in the coordination sphere of Li(+). The ligand-exchange mechanism of Li(+) ions solvated by DMSO and water/DMSO mixtures was studied using DFT calculations. Ligand exchange on [Li(DMSO)(4)](+) was found to follow a limiting associative (A) mechanism. The displacement of coordinated H(2)O by DMSO in [Li(H(2)O)(4)](+) follows an associative interchange mechanism. The suggested mechanisms are discussed in reference to available experimental and theoretical data.