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Samia NI, Stramer O, Saitoh T, Stenseth NC. Climate-driven context-dependent structure of population cycles. ROYAL SOCIETY OPEN SCIENCE 2024; 11:240047. [PMID: 39205994 PMCID: PMC11349440 DOI: 10.1098/rsos.240047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/12/2024] [Revised: 05/27/2024] [Accepted: 07/26/2024] [Indexed: 09/04/2024]
Abstract
Multiannual population cycles of small mammals are of interest within population biology. We propose an approach for multidimensional autoregressive (AR) time series and analyse monitoring data on grey-sided voles (Myodes rufocanus) in Japan to investigate one or possibly multiple multiannual cycles that drive population dynamics. Temperature, through modifying rodent communities, is found to be a key factor shaping population dynamics. Warmer areas are the main habitat for other rodent species resulting in low vole abundance/dominance, as opposed to higher vole dominance in colder areas-a pattern associated with the AR structure and population cycle. Vole populations in simple rodent communities exhibit an AR(2) cycle of 2-3 years. In areas with complex rodent communities, vole dynamics follows an AR(4) process and a combination of two cycles with different lengths. The AR structure varies in relatively small spatial scales, thus widening the scope of AR analyses needed. Historically, vole abundance increased in the late 1970s and decreased from the 1980s, with warm winters shown to be associated with the decline of vole abundance in the AR(4) populations. This significant association between the AR order, population dynamics, temperature and rodent community provides insights into the declining trends observed in rodent populations of the Northern Hemisphere.
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Affiliation(s)
- Noelle I Samia
- Department of Statistics and Data Science, Northwestern University, 2006 Sheridan Road, Evanston, IL 60208, USA
| | - Osnat Stramer
- Department of Statistics and Actuarial Science, University of Iowa, 241 Schaeffer Hall, Iowa City, IA 52242, USA
| | - Takashi Saitoh
- Field Science Center, Hokkaido University, North 11, West 10, Sapporo 060-0811, Japan
| | - Nils Chr Stenseth
- Centre for Ecological and Evolutionary Synthesis (CEES), University of Oslo, PO Box 1066, Blindern, 0316 Oslo, Norway
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Zhao X, Guo J, Wang Y, Yi X. High-tannin food enhances spatial memory and scatter-hoarding in rodents via the microbiota-gut-brain axis. MICROBIOME 2024; 12:140. [PMID: 39075602 DOI: 10.1186/s40168-024-01849-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2023] [Accepted: 05/29/2024] [Indexed: 07/31/2024]
Abstract
BACKGROUND The mutually beneficial coevolutionary relationships between rodents and plant seeds have been a theme of research in plant-animal relationships. Seed tannins are important secondary metabolites of plants that regulate the food-hoarding behavior of rodents; however, the underlying molecular mechanisms are not yet clear. In this study, we investigated whether and how seed tannins improve spatial memory and regulate the hoarding behavior of Tamias sibiricus by altering their gut microbiota. RESULTS We showed that acorn tannins not only improved spatial memory but also enhanced scatter-hoarding in T. sibiricus. Changes in the composition and function of the gut microbiota in response to tannins from acorns are closely related to these improvements. Metabonomic analyses revealed the role of gut isovaleric acid and isobutyric acid as well as serum L-tryptophan in mediating the spatial memory of T. sibiricus via the gut microbiota. The hippocampal proteome provides further evidence that the microbiota-gut-brain axis regulates spatial memory and scatter-hoarding in animals. Our study is likely the first to report that plant secondary metabolites improve hippocampal function and spatial memory and ultimately modulate food-hoarding behavior via the microbiota-gut-brain axis. CONCLUSION Our findings may have resolved the long-standing puzzle about the hidden role of plant secondary metabolites in manipulating food-hoarding behavior in rodents via the microbiota-gut-brain axis. Our study is important for better understanding the mutualistic coevolution between plants and animals. Video Abstract.
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Affiliation(s)
- Xiangyu Zhao
- School of Life Sciences, Qufu Normal University, Qufu, 273165, China
| | - Jiawei Guo
- School of Life Sciences, Qufu Normal University, Qufu, 273165, China
- Present address: Huxi Middle School, Dongchangfu District, Liaocheng, 252000, China
| | - Yiming Wang
- School of Life Sciences, Qufu Normal University, Qufu, 273165, China
| | - Xianfeng Yi
- School of Life Sciences, Qufu Normal University, Qufu, 273165, China.
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Anders JL, Moustafa MAM, Mohamed WMA, Hayakawa T, Nakao R, Koizumi I. Comparing the gut microbiome along the gastrointestinal tract of three sympatric species of wild rodents. Sci Rep 2021; 11:19929. [PMID: 34620922 PMCID: PMC8497572 DOI: 10.1038/s41598-021-99379-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Accepted: 09/23/2021] [Indexed: 02/08/2023] Open
Abstract
Host-microbe interactions within the gastrointestinal tract (GIT) play a pivotal role in shaping host physiology, ecology, and life history. However, these interactions vary across gut regions due to changes in the physical environment or host immune system activity, thereby altering the microbial community. Each animal species may harbor their own unique microbial community due to host species-specific ecological traits such as dietary habits, micro-habitat preferences, and mating behavior as well as physiological traits. While the gut microbiota in wild animals has received much attention over the last decade, most studies comparing closely related species only utilized fecal or colon samples. In this study, we first compared the gut microbial community from the small intestine, cecum, colon, and rectum within three sympatric species of wild rodents (i.e. Apodemus speciosus, A. argenteus, and Myodes rufocanus). We then compared each gut region among host species to determine the effect of both gut region and host species on the gut microbiota. We found that the small intestine harbored a unique microbiome as compared to the lower GIT in all three host species, with the genus Lactobacillus in particular having higher abundance in the small intestine of all three host species. There were clear interspecific differences in the microbiome within all gut regions, although some similarity in alpha diversity and community structure within the small intestine was found. Finally, fecal samples may be appropriate for studying the lower GIT in these species, but not the small intestine.
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Affiliation(s)
- Jason L. Anders
- grid.39158.360000 0001 2173 7691Graduate School of Environmental Science, Hokkaido University, N10W5, Sapporo, Hokkaido 060-0810 Japan
| | - Mohamed Abdallah Mohamed Moustafa
- grid.39158.360000 0001 2173 7691Laboratory of Parasitology, Graduate School of Infectious Diseases, Faculty of Veterinary Medicine, Hokkaido University, Kita-18, Nishi-9, Sapporo, Hokkaido 060-0818 Japan ,grid.412707.70000 0004 0621 7833Department Animal Medicine, South Valley University, Qena, 83523 Egypt
| | - Wessam Mohamed Ahmed Mohamed
- grid.39158.360000 0001 2173 7691Laboratory of Parasitology, Graduate School of Infectious Diseases, Faculty of Veterinary Medicine, Hokkaido University, Kita-18, Nishi-9, Sapporo, Hokkaido 060-0818 Japan
| | - Takashi Hayakawa
- grid.39158.360000 0001 2173 7691Faculty of Environmental Earth Science, Hokkaido University, N10W5, Sapporo, Hokkaido 060-0810 Japan ,grid.471626.00000 0004 4649 1909Japan Monkey Centre, Inuyama, Aichi 484-0081 Japan
| | - Ryo Nakao
- grid.39158.360000 0001 2173 7691Laboratory of Parasitology, Graduate School of Infectious Diseases, Faculty of Veterinary Medicine, Hokkaido University, Kita-18, Nishi-9, Sapporo, Hokkaido 060-0818 Japan
| | - Itsuro Koizumi
- grid.39158.360000 0001 2173 7691Faculty of Environmental Earth Science, Hokkaido University, N10W5, Sapporo, Hokkaido 060-0810 Japan
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Windley HR, Shimada T. Cold temperature improves tannin tolerance in a granivorous rodent. J Anim Ecol 2019; 89:471-481. [PMID: 31580494 DOI: 10.1111/1365-2656.13119] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2019] [Accepted: 09/18/2019] [Indexed: 11/28/2022]
Abstract
The foraging ecology of mammalian herbivores is regulated in part by their ability to detoxify plant secondary metabolites (PSM). Ambient temperature has been shown to alter liver function in rodents and the toxicity of some PSMs, but little is known about the physiological and nutritional consequences of consuming PSMs at different ambient temperatures. Furthermore, the effect of ambient temperature on the response of mammals to the most ubiquitous class of PSM, tannins, is unknown. We measured the effect of temperature and tannin intake on liver function, and the subsequent effect on the tannin tolerance of wild Japanese wood mice, Apodemus speciosus. The experiment involved acclimation to one of two ambient temperatures (10°C or 20°C) followed by acclimation to a diet of acorns (6.2% tannin DW). Liver function was measured both before and after acclimation to acorns by measuring the clearance time of a hypnotic agent. Finally, the mice were fed only acorns in a 5-day feeding experiment to assess their tolerance to tannin in the diet. Acclimation to acorns had a significant effect on liver function, but the direction of this effect was dependent on ambient temperature. Acorn consumption improved the liver function of wood mice at 10°C, but reduced liver function at 20°C, revealing a complex relationship between ambient temperature and tannin intake on liver function. Furthermore, mice with better liver function, indicated by faster clearance of the hypnotic agent, exhibited higher protein digestibility on an acorn-only diet, indicative of higher tannin tolerance. These results suggest that environmental temperature plays a significant role in the tolerance of A. speciosus to tannins, providing new insight into their seasonal feeding behaviour and winter ecology. We contend that cold-induced tannin tolerance may help to explain the population dynamics of mammalian herbivores with seasonal changes in the tannin content of their diet, and inform predictions about the response of these animals to a changing climate.
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Affiliation(s)
- Hannah R Windley
- Wildlife Ecology Laboratory, Department of Wildlife Biology, Forestry and Forest Products Research Institute, Tsukuba, Japan
| | - Takuya Shimada
- Wildlife Ecology Laboratory, Department of Wildlife Biology, Forestry and Forest Products Research Institute, Tsukuba, Japan
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Sato JJ, Kyogoku D, Komura T, Inamori C, Maeda K, Yamaguchi Y, Isagi Y. Potential and Pitfalls of the DNA Metabarcoding Analyses for the Dietary Study of the Large Japanese Wood Mouse Apodemus speciosus on Seto Inland Sea Islands. MAMMAL STUDY 2019. [DOI: 10.3106/ms2018-0067] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Affiliation(s)
- Jun J. Sato
- Laboratory of Animal Cell Technology, Faculty of Life Science and Technology, Fukuyama University, Higashimura-cho, Aza, Sanzo, 985, Fukuyama 729-0292, Japan
| | - Daisuke Kyogoku
- Laboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan
| | - Taketo Komura
- Laboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan
| | - Chiaki Inamori
- Laboratory of Animal Cell Technology, Faculty of Life Science and Technology, Fukuyama University, Higashimura-cho, Aza, Sanzo, 985, Fukuyama 729-0292, Japan
| | - Kouhei Maeda
- Laboratory of Animal Cell Technology, Faculty of Life Science and Technology, Fukuyama University, Higashimura-cho, Aza, Sanzo, 985, Fukuyama 729-0292, Japan
| | - Yasunori Yamaguchi
- Laboratory of Animal Cell Technology, Faculty of Life Science and Technology, Fukuyama University, Higashimura-cho, Aza, Sanzo, 985, Fukuyama 729-0292, Japan
| | - Yuji Isagi
- Laboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan
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Sato JJ, Shimada T, Kyogoku D, Komura T, Uemura S, Saitoh T, Isagi Y. Dietary niche partitioning between sympatric wood mouse species (Muridae: Apodemus) revealed by DNA meta-barcoding analysis. J Mammal 2018. [DOI: 10.1093/jmammal/gyy063] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Affiliation(s)
- Jun J Sato
- Faculty of Life Science and Technology, Fukuyama University, Higashimura-cho, Aza, Sanzo, Fukuyama, Japan
| | - Takuya Shimada
- Tohoku Research Center, Forestry and Forest Products Research Institute, Nabeyashiki, Shimo-Kuriyagawa, Morioka, Japan
| | - Daisuke Kyogoku
- Laboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto, Japan
| | - Taketo Komura
- Laboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto, Japan
| | - Shigeru Uemura
- Field Science Center, Hokkaido University, Tokuda, Nayoro, Japan
| | - Takashi Saitoh
- Field Science Center, Hokkaido University, Kita-11, Nishi-10, Sapporo, Japan
| | - Yuji Isagi
- Laboratory of Forest Biology, Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kyoto, Japan
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Effects of tannins on population dynamics of sympatric seed-eating rodents: the potential role of gut tannin-degrading bacteria. Oecologia 2018; 187:667-678. [PMID: 29736862 DOI: 10.1007/s00442-018-4151-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2017] [Accepted: 04/23/2018] [Indexed: 10/17/2022]
Abstract
Chemical compounds in seeds exert negative and even lethal effects on seed-consuming animals. Tannin-degrading bacteria in the guts of small mammals have been associated with the ability to digest seeds high in tannins. At the population level, it is not known if tannins influence rodent species differently according to the composition of their gut microbiota. Here, we test the hypothesis that sympatric tree species with different tannins exert contrasting effects on population fluctuations of seed-eating rodents. We collected a 10-year dataset of seed crops and rodent population sizes and sequenced 16S rRNA of gut microbes. The abundance of Apodemus peninsulae was not correlated with seed crop of either high-tannin Quercus mongolica or low-tannin Corylus mandshurica, but positively correlated with their total seed crops. Abundance of Tamias sibiricus was negatively correlated with seed crop of Q. mongolica but positively correlated with C. mandshurica. Body masses of A. peninsulae and T. sibiricus decreased when given high-tannin food; however, only the survival of T. sibiricus was reduced. The abundance of microbial genus Lactobacillus exhibiting potential tannin-degrading activity was significantly higher in A. peninsulae than in T. sibiricus. Our results suggest that masting tree species with different tannin concentrations may differentially influence population fluctuations of seed predators hosting different gut microbial communities. Although the conclusion is based on just correlational analysis of a short time-series, seeds with different chemical composition may influence rodent populations differently. Future work should examine these questions further to understand the complex interactions among seeds, gut microbes, and animal populations.
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8
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Main determinants of rodent population fluctuations in managed Central European temperate lowland forests. MAMMAL RES 2017. [DOI: 10.1007/s13364-017-0316-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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9
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Different population responses of three sympatric rodent species to acorn masting—the role of tannin tolerance. POPUL ECOL 2017. [DOI: 10.1007/s10144-017-0570-9] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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10
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Sato JJ, Kawakami T, Tasaka Y, Tamenishi M, Yamaguchi Y. A Few Decades of Habitat Fragmentation has Reduced Population Genetic Diversity: A Case Study of Landscape Genetics of the Large Japanese Field Mouse,Apodemus speciosus. MAMMAL STUDY 2014. [DOI: 10.3106/041.039.0102] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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11
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Zhang M, Steele MA, Yi X. Reconsidering the effects of tannin on seed dispersal by rodents: evidence from enclosure and field experiments with artificial seeds. Behav Processes 2013; 100:200-7. [PMID: 24161819 DOI: 10.1016/j.beproc.2013.09.010] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2012] [Revised: 08/02/2013] [Accepted: 09/25/2013] [Indexed: 11/27/2022]
Abstract
The question of how tannin affects feeding and hoarding preferences of rodents still remains poorly understood, in part, because it is difficult to control for other seed traits when considering the sole effect of tannin. Here, we constructed a series of artificial 'seeds' with different tannin levels, made from wheat flour, peanut powder and hydrolysable tannins, to determine the direct effects of tannin on both feeding and hoarding preferences. We first presented 'seeds' to individual rodents of two species (Tamias sibiricus and Apodemus peninsulae) confined in semi-natural enclosures and then monitored patterns of seed dispersal and consumption by free-ranging animals in a temperate forest in the Xiaoxing'an Mountains, Heilongjiang Province of China. Our results showed that small rodents displayed a significant preference for low-tannin 'seeds' for both consumption and caching in both captive and field experiments. Moreover, our two-year study consistently showed that tannin concentration was significantly and negatively correlated with the number of cached 'seeds' at both the individual and population levels. Seed size, compared with tannin concentrations, appeared to have little effect on dispersal distances and the number of 'seeds' cached. Low-tannin 'seeds' tended to be dispersed greater distances by rodents in the field than those with higher levels of tannin. These results failed to support those of previous reports indicating that acorns containing higher tannins are more likely to be cached by food hoarding animals.
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Affiliation(s)
- Mingming Zhang
- College of Agriculture, Henan University of Science and Technology, Luoyang 471003, China
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13
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Interspecific differences in tannin intakes of forest-dwelling rodents in the wild revealed by a new method using fecal proline content. J Chem Ecol 2011; 37:1277-84. [PMID: 22161223 DOI: 10.1007/s10886-011-0045-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2011] [Revised: 10/23/2011] [Accepted: 12/01/2011] [Indexed: 10/14/2022]
Abstract
Mammalian herbivores adopt various countermeasures against dietary tannins, which are among the most widespread plant secondary metabolites. The large Japanese wood mouse Apodemus speciosus produces proline-rich salivary tannin-binding proteins in response to tannins. Proline-rich proteins (PRPs) react with tannins to form stable complexes that are excreted in the feces. Here, we developed a new method for estimating the tannin intake of free-living small rodents, by measuring fecal proline content, and applied the method to a field investigation. A feeding experiment with artificial diets containing various levels of tannic acid revealed that fecal proline content was clearly related to dietary tannin content in three species (A. speciosus, Apodemus argenteus, and Myodes rufocanus). We then used fecal proline content to estimate the tannin intakes of these three forest-dwelling species in a forest in Hokkaido. In the autumn, estimated tannin intakes increased significantly in the Apodemus species, but not in M. rufocanus. We speculated that an increase in tannin intake during autumn may result from consumption of tannin-rich acorns. This hypothesis was consistent with population fluctuation patterns of the three species, which were well-synchronized with acorn abundance for the Apodemus species but not for M. rufocanus.
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Unnsteinsdottir ER, Hersteinsson P. Effects of contrasting habitats on population parameters and diet of Apodemus sylvaticus (Rodentia) in south-western Iceland. MAMMALIA 2011. [DOI: 10.1515/mamm.2010.068] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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15
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White TCR. The significance of unripe seeds and animal tissues in the protein nutrition of herbivores. Biol Rev Camb Philos Soc 2010; 86:217-24. [DOI: 10.1111/j.1469-185x.2010.00143.x] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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16
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Effects of acorn abundance on density dependence in a Japanese wood mouse (Apodemus speciosus) population. POPUL ECOL 2008. [DOI: 10.1007/s10144-008-0076-6] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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