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Obtaining Bioproducts from the Studies of Signals and Interactions between Microalgae and Bacteria. Microorganisms 2022; 10:microorganisms10102029. [PMID: 36296305 PMCID: PMC9607603 DOI: 10.3390/microorganisms10102029] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2022] [Revised: 10/05/2022] [Accepted: 10/12/2022] [Indexed: 11/27/2022] Open
Abstract
The applications of microalgae biomass have been widely studied worldwide. The classical processes used in outdoor cultivations of microalgae, in closed or open photobioreactors, occur in the presence of bacteria. Understanding how communication between cells occurs through quorum sensing and evaluating co-cultures allows the production of microalgae and cyanobacteria to be positively impacted by bacteria, in order to guarantee safety and profitability in the production process. In addition, the definition of the effects that occur during an interaction, promotes insights to improve the production of biomolecules, and to develop innovative products. This review presents the interactions between microalgae and bacteria, including compounds exchanges and communication, and addresses the development of new pharmaceutical, cosmetic and food bioproducts from microalgae based on these evaluations, such as prebiotics, vegan skincare products, antimicrobial compounds, and culture media with animal free protein for producing vaccines and other biopharmaceutical products. The use of microalgae as raw biomass or in biotechnological platforms is in line with the fulfillment of the 2030 Agenda related to the Sustainable Development Goals (SDGs).
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Madhubalaji CK, Ravi S, Mudliar SN. Unraveling of Chlorella-associated bacterial load, diversity, and their imputed functions at high- and low-yield conditions through metagenome sequencing. JOURNAL OF PHYCOLOGY 2022; 58:133-145. [PMID: 34850388 DOI: 10.1111/jpy.13225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2021] [Revised: 10/04/2021] [Accepted: 10/28/2021] [Indexed: 06/13/2023]
Abstract
Chlorella-associated bacteria can have a significant influence on facilitating higher Chlorella biomass yield due to their symbiotic relationship. In this study, non-axenic Chlorella was cultivated in an airlift photobioreactor at high and low-yield conditions. The associated bacterial diversity was analyzed using 16S rRNA metagenome sequencing. At high-yield conditions, the bacterial load was observed in the range of 108 -1010 CFU · mL-1 , whereas at low-yield conditions, bacteria were more dominant and observed in the range of 1014 -1015 CFU · mL-1 . The majority of the bacterial species associated with Chlorella at high-yield conditions belongs to Proteobacteria and Bacteroidetes. Further, Bacteroidetes levels were decreased at low-yield conditions and were highly diversified with Planctomycetes, Firmicutes, and 18 others. Predicted functional genes indicated that Chlorella-associated bacteria have the enzymes involved in the metabolism and biosynthesis of B-complex vitamins (i.e., vitamin B12 , thiamin, biotin, pyridoxine, and riboflavin). A critical evaluation revealed that vitamin biosynthesis genes were more abundant at low-yield conditions; however, vitamin B12 transport genes (B12 transport ATP-binding protein, B12 substrate-binding transportation, and B12 permease protein) were less abundant, indicating even though vitamins production occurs, but their availability to Chlorella was limited due to the lack of vitamin transport genes. Further, at high yield, Chlorella-associated bacteria enabled higher growth by supplementing the vitamins. In contrast, at low-yield condition-an increased bacterial load, diversity, and limited vitamin transport functional genes affected the Chlorella yield. It can be inferred that Chlorella yield was significantly affected by three factors: associated bacterial load, diversity, and transport functional genes of vitamins.
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Affiliation(s)
- Chegu Krishnamurthi Madhubalaji
- Plant Cell Biotechnology Department, CSIR-Central Food Technological Research Institute, Mysuru, 570020, Karnataka, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Sarada Ravi
- Plant Cell Biotechnology Department, CSIR-Central Food Technological Research Institute, Mysuru, 570020, Karnataka, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Sandeep N Mudliar
- Plant Cell Biotechnology Department, CSIR-Central Food Technological Research Institute, Mysuru, 570020, Karnataka, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
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3
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Woyda-Ploszczyca AM, Rybak AS. How can the commercial potential of microalgae from the Dunaliella genus be improved? The importance of nucleotide metabolism with a focus on nucleoside diphosphate kinase (NDPK). ALGAL RES 2021. [DOI: 10.1016/j.algal.2021.102474] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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4
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Fuchs T, Arnold ND, Garbe D, Deimel S, Lorenzen J, Masri M, Mehlmer N, Weuster-Botz D, Brück TB. A Newly Designed Automatically Controlled, Sterilizable Flat Panel Photobioreactor for Axenic Algae Culture. Front Bioeng Biotechnol 2021; 9:697354. [PMID: 34277591 PMCID: PMC8280782 DOI: 10.3389/fbioe.2021.697354] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2021] [Accepted: 06/08/2021] [Indexed: 11/13/2022] Open
Abstract
In context of the global climate change, microalgae processes are gaining momentum as a biotechnological tool for direct fixation and valorization of greenhouse gases. Algae have the metabolic capacity to photosynthetically convert CO2 into high value products, such as food additives, under economic boundary conditions. High cost, commercial flat panel gas-lift bioreactors for microalgae cultivation at laboratory scale provide either small volumes or no sterile operation, which limits academic research. This brief report presents initial data for a new type of sterile operating flat panel gas-lift bioreactor with a unique asymmetrical U-shape. It utilizes automatable process control technologies that adhere to industrial standards to enhance data reproducibility and aid industrial scale up. The practicability was demonstrated using a Chlorella sorokiniana cultivation, which showed the typical growth behavior. Due to the sophisticated implemented control engineering technology, pivotal parameters as pH and temperature can be determined within a range of ±0.1 units, which was confirmed experimentally. The new flat panel gas-lift photobioreactor presented in this brief report fills the technology gap at laboratory scale with an autoclavable volume of 7.2 L. Moreover, it is easy to rebuild by means of the hereby provided blueprint, while exhibiting a six-fold cost reduction compared to commercially available flat panel photobioreactors.
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Affiliation(s)
- Tobias Fuchs
- Werner Siemens-Chair of Synthetic Biotechnology, Technical University of Munich, Garching, Germany.,TUM-AlgaeTec Center, Technical University of Munich, Taufkirchen, Germany
| | - Nathanael D Arnold
- Werner Siemens-Chair of Synthetic Biotechnology, Technical University of Munich, Garching, Germany
| | - Daniel Garbe
- Werner Siemens-Chair of Synthetic Biotechnology, Technical University of Munich, Garching, Germany.,TUM-AlgaeTec Center, Technical University of Munich, Taufkirchen, Germany
| | - Simon Deimel
- Bürkert Werke GmbH & Co., KG, Systemhaus Ingelfingen, Ingelfingen, Germany
| | - Jan Lorenzen
- Werner Siemens-Chair of Synthetic Biotechnology, Technical University of Munich, Garching, Germany
| | - Mahmoud Masri
- Werner Siemens-Chair of Synthetic Biotechnology, Technical University of Munich, Garching, Germany
| | - Norbert Mehlmer
- Werner Siemens-Chair of Synthetic Biotechnology, Technical University of Munich, Garching, Germany
| | - Dirk Weuster-Botz
- TUM-AlgaeTec Center, Technical University of Munich, Taufkirchen, Germany.,Institute of Biochemical Engineering, Technical University of Munich, Garching, Germany
| | - Thomas B Brück
- Werner Siemens-Chair of Synthetic Biotechnology, Technical University of Munich, Garching, Germany.,TUM-AlgaeTec Center, Technical University of Munich, Taufkirchen, Germany
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5
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Chernikova TN, Bargiela R, Toshchakov SV, Shivaraman V, Lunev EA, Yakimov MM, Thomas DN, Golyshin PN. Hydrocarbon-Degrading Bacteria Alcanivorax and Marinobacter Associated With Microalgae Pavlova lutheri and Nannochloropsis oculata. Front Microbiol 2020; 11:572931. [PMID: 33193176 PMCID: PMC7655873 DOI: 10.3389/fmicb.2020.572931] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2020] [Accepted: 10/01/2020] [Indexed: 12/26/2022] Open
Abstract
Marine hydrocarbon-degrading bacteria play an important role in natural petroleum biodegradation processes and were initially associated with man-made oil spills or natural seeps. There is no full clarity though on what, in the absence of petroleum, their natural niches are. Few studies pointed at some marine microalgae that produce oleophilic compounds (alkanes, long-chain fatty acids, and alcohols) as potential natural hosts of these bacteria. We established Dansk crude oil-based enrichment cultures with photobioreactor-grown marine microalgae cultures Pavlova lutheri and Nannochloropsis oculata and analyzed the microbial succession using cultivation and SSU (16S) rRNA amplicon sequencing. We found that petroleum enforced a strong selection for members of Alpha- and Gamma-proteobacteria in both enrichment cultures with the prevalence of Alcanivorax and Marinobacter spp., well-known hydrocarbonoclastic bacteria. In total, 48 non-redundant bacterial strains were isolated and identified to represent genera Alcanivorax, Marinobacter, Thalassospira, Hyphomonas, Halomonas, Marinovum, Roseovarius, and Oleibacter, which were abundant in sequencing reads in both crude oil enrichments. Our assessment of public databases demonstrated some overlaps of geographical sites of isolation of Nannochloropsis and Pavlova with places of molecular detection and isolation of Alcanivorax and Marinobacter spp. Our study suggests that these globally important hydrocarbon-degrading bacteria are associated with P. lutheri and N. oculata.
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Affiliation(s)
- Tatyana N Chernikova
- School of Natural Sciences, Bangor University, Bangor, United Kingdom.,CEB-Centre for Environmental Biotechnology, Bangor University, Bangor, United Kingdom
| | - Rafael Bargiela
- School of Natural Sciences, Bangor University, Bangor, United Kingdom
| | | | | | - Evgenii A Lunev
- Institute of Living Systems, Immanuel Kant Baltic Federal University, Kaliningrad, Russia
| | - Michail M Yakimov
- Institute for Marine Biological Resources and Biotechnology of the National Research Council, IRBIM-CNR, Messina, Italy
| | - David N Thomas
- School of Ocean Sciences, Bangor University, Menai Bridge, United Kingdom
| | - Peter N Golyshin
- School of Natural Sciences, Bangor University, Bangor, United Kingdom.,CEB-Centre for Environmental Biotechnology, Bangor University, Bangor, United Kingdom
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Behera B, Acharya A, Gargey IA, Aly N, P B. Bioprocess engineering principles of microalgal cultivation for sustainable biofuel production. ACTA ACUST UNITED AC 2019. [DOI: 10.1016/j.biteb.2018.08.001] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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7
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Wang Y, Gong Y, Dai L, Sommerfeld M, Zhang C, Hu Q. Identification of harmful protozoa in outdoor cultivation of Chlorella and the use of ultrasonication to control contamination. ALGAL RES 2018. [DOI: 10.1016/j.algal.2018.02.002] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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8
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Production of Fatty Acids and Protein by Nannochloropsis in Flat-Plate Photobioreactors. PLoS One 2017; 12:e0170440. [PMID: 28103296 PMCID: PMC5245880 DOI: 10.1371/journal.pone.0170440] [Citation(s) in RCA: 51] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2016] [Accepted: 01/04/2017] [Indexed: 12/23/2022] Open
Abstract
Nannochloropsis is an industrially-promising microalga that may be cultivated for alternative sources of nutrition due to its high productivity, protein content and lipid composition. We studied the growth and biochemical profile of Nannochloropsis 211/78 (CCAP) in optimized flat-plate photobioreactors. Eighteen cultivations were performed at two nutrient concentrations. The fatty acid, protein content and calorific values were analyzed after 8, 12 and 16 days. Neutral lipids were separated and the changes in fatty acids in triglycerides (TAGs) during nutrient depletion were recorded. The maximum cell density reached 4.7 g∙L-1 and the maximum productivity was 0.51 g∙L-1∙d-1. During nutrient-replete conditions, eicosapentaneoic acid (EPA) and total protein concentrations measured 4.2–4.9% and 50–55% of the dry mass, respectively. Nutrient starvation induced the accumulation of fatty acids up to 28.3% of the cell dry weight, largely due to the incorporation of C16:0 and C16:1n-7 fatty acyl chains into neutral lipids. During nutrient starvation the total EPA content did not detectibly change, but up to 37% was transferred from polar membrane lipids to the neutral lipid fraction.
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Zevin AS, Rittmann BE, Krajmalnik-Brown R. The source of inoculum drives bacterial community structure in Synechocystis sp. PCC6803-based photobioreactors. ALGAL RES 2016. [DOI: 10.1016/j.algal.2015.11.017] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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10
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Price JR, Shieh WK, Sales CM. A Novel Bioreactor for High Density Cultivation of Diverse Microbial Communities. J Vis Exp 2015:e53443. [PMID: 26780544 DOI: 10.3791/53443] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023] Open
Abstract
A novel reactor design, coined a high density bioreactor (HDBR), is presented for the cultivation and study of high density microbial communities. Past studies have evaluated the performance of the reactor for the removal of COD(1) and nitrogen species(2-4) by heterotrophic and chemoautotrophic bacteria, respectively. The HDBR design eliminates the requirement for external flocculation/sedimentation processes while still yielding effluent containing low suspended solids. In this study, the HDBR is applied as a photobioreactor (PBR) in order to characterize the nitrogen removal characteristics of an algae-based photosynthetic microbial community. As previously reported for this HDBR design, a stable biomass zone was established with a clear delineation between the biologically active portion of the reactor and the recycling reactor fluid, which resulted in a low suspended solid effluent. The algal community in the HDBR was observed to remove 18.4% of total nitrogen species in the influent. Varying NH4(+) and NO3(-) concentrations in the feed did not have an effect on NH4(+) removal (n=44, p=0.993 and n=44, p=0.610 respectively) while NH4(+) feed concentration was found to be negatively related with NO3(-) removal (n=44, p=0.000) and NO3(-) feed concentration was found to be positively correlated with NO3(-) removal (n=44, p=0.000). Consistent removal of NH4(+), combined with the accumulation of oxidized nitrogen species at high NH4(+) fluxes indicates the presence of ammonia- and nitrite-oxidizing bacteria within the microbial community.
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Affiliation(s)
- Jacob R Price
- Civil, Architectural, and Environmental Engineering, Drexel University
| | - Wen K Shieh
- Chemical and Biomolecular Engineering, University of Pennsylvania
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11
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Zevin AS, Nam T, Rittmann B, Krajmalnik-Brown R. Effects of phosphate limitation on soluble microbial products and microbial community structure in semi-continuousSynechocystis-based photobioreactors. Biotechnol Bioeng 2015; 112:1761-9. [DOI: 10.1002/bit.25602] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2015] [Revised: 02/19/2015] [Accepted: 03/06/2015] [Indexed: 11/09/2022]
Affiliation(s)
- Alexander S. Zevin
- Swette Center for Environmental Biotechnology; Arizona State University; Tempe Arizona
| | - Taekgul Nam
- Swette Center for Environmental Biotechnology; Arizona State University; Tempe Arizona
| | - Bruce Rittmann
- Swette Center for Environmental Biotechnology; Arizona State University; Tempe Arizona
- School of Sustainable Engineering and the Built Environment; Biodesign Institute at Arizona State University; 1001 South McAllister Avenue Tempe Arizona 85287-5701
| | - Rosa Krajmalnik-Brown
- Swette Center for Environmental Biotechnology; Arizona State University; Tempe Arizona
- School of Sustainable Engineering and the Built Environment; Biodesign Institute at Arizona State University; 1001 South McAllister Avenue Tempe Arizona 85287-5701
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Metagenome survey of a multispecies and alga-associated biofilm revealed key elements of bacterial-algal interactions in photobioreactors. Appl Environ Microbiol 2013; 79:6196-206. [PMID: 23913425 DOI: 10.1128/aem.01641-13] [Citation(s) in RCA: 76] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Abstract
Photobioreactors (PBRs) are very attractive for sunlight-driven production of biofuels and capturing of anthropogenic CO2. One major problem associated with PBRs however, is that the bacteria usually associated with microalgae in nonaxenic cultures can lead to biofouling and thereby affect algal productivity. Here, we report on a phylogenetic, metagenome, and functional analysis of a mixed-species bacterial biofilm associated with the microalgae Chlorella vulgaris and Scenedesmus obliquus in a PBR. The biofilm diversity and population dynamics were examined through 16S rRNA phylogeny. Overall, the diversity was rather limited, with approximately 30 bacterial species associated with the algae. The majority of the observed microorganisms were affiliated with Alphaproteobacteria, Betaproteobacteria, and Bacteroidetes. A combined approach of sequencing via GS FLX Titanium from Roche and HiSeq 2000 from Illumina resulted in the overall production of 350 Mbp of sequenced DNA, 165 Mbp of which was assembled in larger contigs with a maximum size of 0.2 Mbp. A KEGG pathway analysis suggested high metabolic diversity with respect to the use of polymers and aromatic and nonaromatic compounds. Genes associated with the biosynthesis of essential B vitamins were highly redundant and functional. Moreover, a relatively high number of predicted and functional lipase and esterase genes indicated that the alga-associated bacteria are possibly a major sink for lipids and fatty acids produced by the microalgae. This is the first metagenome study of microalga- and PBR-associated biofilm bacteria, and it gives new clues for improved biofuel production in PBRs.
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Lakaniemi AM, Tuovinen OH, Puhakka JA. Anaerobic conversion of microalgal biomass to sustainable energy carriers--a review. BIORESOURCE TECHNOLOGY 2013; 135:222-231. [PMID: 23021960 DOI: 10.1016/j.biortech.2012.08.096] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2012] [Revised: 08/21/2012] [Accepted: 08/22/2012] [Indexed: 06/01/2023]
Abstract
This review discusses anaerobic production of methane, hydrogen, ethanol, butanol and electricity from microalgal biomass. The amenability of microalgal biomass to these bioenergy conversion processes is compared with other aquatic and terrestrial biomass sources. The highest energy yields (kJ g(-1) dry wt. microalgal biomass) reported in the literature have been 14.8 as ethanol, 14.4 as methane, 6.6 as butanol and 1.2 as hydrogen. The highest power density reported from microalgal biomass in microbial fuel cells has been 980 mW m(-2). Sequential production of different energy carriers increases attainable energy yields, but also increases investment and maintenance costs. Microalgal biomass is a promising feedstock for anaerobic energy conversion processes, especially for methanogenic digestion and ethanol fermentation. The reviewed studies have mainly been based on laboratory scale experiments and thus scale-up of anaerobic utilization of microalgal biomass for production of energy carriers is now timely and required for cost-effectiveness comparisons.
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Affiliation(s)
- Aino-Maija Lakaniemi
- Department of Chemistry and Bioengineering, Tampere University of Technology, P.O. Box 541, FI-33101 Tampere, Finland.
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Lakaniemi AM, Hulatt CJ, Wakeman KD, Thomas DN, Puhakka JA. Eukaryotic and prokaryotic microbial communities during microalgal biomass production. BIORESOURCE TECHNOLOGY 2012; 124:387-393. [PMID: 22995170 DOI: 10.1016/j.biortech.2012.08.048] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2012] [Revised: 08/06/2012] [Accepted: 08/11/2012] [Indexed: 06/01/2023]
Abstract
Eukaryotic and bacterial communities were characterized and quantified in microalgal photobioreactor cultures of freshwater Chlorella vulgaris and marine Dunaliella tertiolecta. The microalgae exhibited good growth, whilst both cultures contained diverse bacterial communities. Both cultures included Proteobacteria and Bacteroidetes, while C. vulgaris cultures also contained Actinobacteria. The bacterial genera present in the cultures were different due to different growth medium salinities and possibly different extracellular products. Bacterial community profiles were relatively stable in D. tertiolecta cultures but not in C. vulgaris cultures likely due to presence of ciliates (Colpoda sp.) in the latter. The presence of ciliates did not, however, cause decrease in total number of C. vulgaris or bacteria during 14 days of cultivation. Quantitative PCR (qPCR) reliably showed relative microalgal and bacterial cell numbers in the batch cultures with stable microbial communities, but was not effective when bacterial communities varied. Raw culture samples were successfully used as qPCR templates.
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Affiliation(s)
- Aino-Maija Lakaniemi
- Department of Chemistry and Bioengineering, Tampere University of Technology, Tampere, Finland.
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