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Bernos TA, Avlijaš S, Hill J, Morissette O, Ricciardi A, Mandrak NE, Jeffries KM. Genetic diversity and structure of a recent fish invasion: Tench ( Tinca tinca) in eastern North America. Evol Appl 2023; 16:173-188. [PMID: 36699124 PMCID: PMC9850014 DOI: 10.1111/eva.13520] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Revised: 10/22/2022] [Accepted: 12/02/2022] [Indexed: 01/20/2023] Open
Abstract
Introduced and geographically expanding populations experience similar eco-evolutionary challenges, including founder events, genetic bottlenecks, and novel environments. Theory predicts that reduced genetic diversity resulting from such phenomena limits the success of introduced populations. Using 1900 SNPs obtained from restriction-site-associated DNA sequencing, we evaluated hypotheses related to the invasion history and connectivity of an invasive population of Tench (Tinca tinca), a Eurasian freshwater fish that has been expanding geographically in eastern North America for three decades. Consistent with the reported history of a single introduction event, our findings suggest that multiple introductions from distinct genetic sources are unlikely as Tench had a small effective population size (~114 [95% CI = 106-123] individuals), no strong population subdivision across time and space, and evidence of a recent genetic bottleneck. The large genetic neighbourhood size (220 km) and weak within-population genetic substructure suggested high connectivity across the invaded range, despite the relatively large area occupied. There was some evidence for a small decay in genetic diversity as the species expanded northward, but not southward, into new habitats. As eradicating the species within a ~112 km radius would be necessary to prevent recolonization, eradicating Tench is likely not feasible at watershed-and possibly local-scales. Management should instead focus on reducing abundance in priority conservation areas to mitigate adverse impacts. Our study indicates that introduced populations can thrive and exhibit relatively high levels of genetic diversity despite severe bottlenecks (<1.5% of the ancestral effective population size) and suggests that landscape heterogeneity and population demographics can generate variability in spatial patterns of genetic diversity within a single range expansion.
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Affiliation(s)
- Thaïs A. Bernos
- Department of Ecology and Evolutionary BiologyUniversity of TorontoTorontoOntarioCanada
- Department of Biological SciencesUniversity of Toronto ScarboroughScarboroughOntarioCanada
| | - Sunčica Avlijaš
- Redpath MuseumMcGill UniversityMontrealQuébecCanada
- Department of BiologyMcGill UniversityMontrealQuébecCanada
| | - Jaclyn Hill
- Maurice Lamontagne InstituteFisheries and Oceans CanadaMont‐JoliQuébecCanada
| | - Olivier Morissette
- Département des Sciences FondamentalesUniversité du Québec à ChicoutimiChicoutimiQuébecCanada
| | | | - Nicholas E. Mandrak
- Department of Ecology and Evolutionary BiologyUniversity of TorontoTorontoOntarioCanada
| | - Kenneth M. Jeffries
- Department of Biological SciencesUniversity of ManitobaWinnipegManitobaCanada
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Andres KJ, Sethi SA, Lodge DM, Andrés J. Nuclear eDNA estimates population allele frequencies and abundance in experimental mesocosms and field samples. Mol Ecol 2021; 30:685-697. [PMID: 33433059 PMCID: PMC7898893 DOI: 10.1111/mec.15765] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2019] [Revised: 11/23/2020] [Accepted: 12/01/2020] [Indexed: 12/25/2022]
Abstract
Advances in environmental DNA (eDNA) methodologies have led to improvements in the ability to detect species and communities in aquatic environments, yet the majority of studies emphasize biological diversity at the species level by targeting variable sites within the mitochondrial genome. Here, we demonstrate that eDNA approaches also have the capacity to detect intraspecific diversity in the nuclear genome, allowing for assessments of population-level allele frequencies and estimates of the number of genetic contributors in an eDNA sample. Using a panel of microsatellite loci developed for the round goby (Neogobius melanostomus), we tested the similarity between eDNA-based and individual tissue-based estimates of allele frequencies from experimental mesocosms and in a field-based trial. Subsequently, we used a likelihood-based DNA mixture framework to estimate the number of unique genetic contributors in eDNA samples and in simulated mixtures of alleles. In both mesocosm and field samples, allele frequencies from eDNA were highly correlated with allele frequencies from genotyped round goby tissue samples, indicating nuclear markers can be reliably amplified from water samples. DNA mixture analyses were able to estimate the number of genetic contributors from mesocosm eDNA samples and simulated mixtures of DNA from up to 58 individuals, with the degree of positive or negative bias dependent on the filtering scheme of low-frequency alleles. With this study we document the application of eDNA and multiple amplicon-based methods to obtain intraspecific nuclear genetic information and estimate the absolute abundance of a species in eDNA samples. With proper validation, this approach has the potential to advance noninvasive survey methods to characterize populations and detect population-level genetic diversity.
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Affiliation(s)
- Kara J Andres
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY, USA
| | - Suresh A Sethi
- U.S. Geological Survey, New York Cooperative Fish and Wildlife Unit, Cornell University, Ithaca, NY, USA
| | - David M Lodge
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY, USA.,Cornell Atkinson Center for Sustainability, Cornell University, Ithaca, NY, USA
| | - Jose Andrés
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY, USA
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3
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Grabowska J, Tarkan AS, Błońska D, Top Karakuş N, Janic B, Przybylski M. Prolific pioneers and reserved settlers. Changes in the life-history of the western tubenose goby (Proterorhinus semilunaris) at different invasion stages. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 750:142316. [PMID: 33182175 DOI: 10.1016/j.scitotenv.2020.142316] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2020] [Revised: 09/06/2020] [Accepted: 09/07/2020] [Indexed: 06/11/2023]
Abstract
The western tubenose goby is one of the most wide-spread invasive fish species in European freshwaters, though information of its life-history in relation to its invasion success is limited. We compared the reproductive traits, growth rate and condition of three populations that differed in their stage of invasion in its expanding range in the River Vistula: core - the oldest population established at the centre of the invasive range; intermediate - long established by downstream dispersal from the core area but continuously supplemented by drifting specimens; front - new population at the edge of the invasive range, upstream from the core area. Pronounced differences in life-history traits were found between the 'core' and the 'front' populations. The 'front' population displayed high investment in reproduction and had heavier gonads, higher fecundity, higher batch fecundity though smaller eggs than the 'core' population. The 'core' population was characterized by the lowest fecundity, the largest eggs, the highest condition after spawning, and the highest maximum age of males. The 'intermediate' population was intermediate between the 'front' and the 'core' populations regarding reproductive traits, but showed the highest growth rates. The life-history traits that varied most among populations were gonad weight, fecundity, gonado-somatic index, condition and growth in the first years of life. Inter-individual variability of life-history traits was lower in the front of the invasive range than in the core and intermediate area. The observed plasticity in life-history appears to favour production of large numbers of offspring in newly-colonised areas in the initial stages of invasion and at the edge of the expanding range. In longer-established populations, at the core of invasive range, a strategy for greater competitiveness under intra-specific competition appears to be favoured.
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Affiliation(s)
- Joanna Grabowska
- University of Lodz, Faculty of Biology and Environmental Protection, Department of Ecology and Vertebrate Zoology, Banacha 12/16, 90-237 Lodz, Poland.
| | - Ali Serhan Tarkan
- University of Lodz, Faculty of Biology and Environmental Protection, Department of Ecology and Vertebrate Zoology, Banacha 12/16, 90-237 Lodz, Poland; Muğla Sıtkı Koçman University, Faculty of Fisheries, 48000 Menteşe, Muğla, Türkiye
| | - Dagmara Błońska
- University of Lodz, Faculty of Biology and Environmental Protection, Department of Ecology and Vertebrate Zoology, Banacha 12/16, 90-237 Lodz, Poland
| | - Nildeniz Top Karakuş
- Muğla Sıtkı Koçman University, Faculty of Fisheries, 48000 Menteşe, Muğla, Türkiye
| | - Bartosz Janic
- University of Lodz, Faculty of Biology and Environmental Protection, Department of Ecology and Vertebrate Zoology, Banacha 12/16, 90-237 Lodz, Poland
| | - Mirosław Przybylski
- University of Lodz, Faculty of Biology and Environmental Protection, Department of Ecology and Vertebrate Zoology, Banacha 12/16, 90-237 Lodz, Poland
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Tutman P, Zanella D, Horvatić S, Hamzić A, Adrović A, Dulčić J, Glamuzina B. Freshwater gobies (Gobiidae) of Bosnia and Herzegovina: a review of the current status and distribution. JOURNAL OF VERTEBRATE BIOLOGY 2020. [DOI: 10.25225/jvb.20046] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- Pero Tutman
- Institute of Oceanography and Fisheries, Split, Croatia; e-mail: ,
| | - Davor Zanella
- University of Zagreb, Faculty of Science, Zagreb, Croatia; e-mail: ,
| | - Sven Horvatić
- University of Zagreb, Faculty of Science, Zagreb, Croatia; e-mail: ,
| | - Adem Hamzić
- University of Sarajevo, Faculty of Science, Sarajevo, Bosnia and Herzegovina; e-mail:
| | - Avdul Adrović
- University of Tuzla, Faculty of Science, Tuzla, Bosnia and Herzegovina; e-mail:
| | - Jakov Dulčić
- Institute of Oceanography and Fisheries, Split, Croatia; e-mail: ,
| | - Branko Glamuzina
- University of Dubrovnik, Department for Aquaculture, Dubrovnik, Croatia; e-mail:
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Dawson B, Peterson G, Hrabik T, Hoffman J. Dietary Niche and Growth Rate of the Nonnative Tubenose Goby (Proterorhinus semilunaris) in the Lake Superior Basin. JOURNAL OF GREAT LAKES RESEARCH 2020; 46:1358-1368. [PMID: 33122871 PMCID: PMC7589645 DOI: 10.1016/j.jglr.2020.07.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The tubenose goby (Proterorhinus semilunaris) entered the Great Lakes in the 1990s via ballast water, but remains poorly studied within North America, making it difficult to predict its effects on native ecosystems. Dietary breadth and somatic growth rate have important ramifications for survival, competitiveness, and dispersal ability of a fish species, and thereby its ecological impact. We studied diet and growth of age-0 tubenose goby within the St. Louis River, a tributary to Lake Superior that contains the largest population within the Lake Superior basin. We sampled tubenose gobies from shallow, vegetated habitat during summer and fall. Stomach contents were identified and weighed to measure fullness and dietary breadth between seasons and several locations. We aged fish based on otolith daily increments to model somatic growth. Diet was dominated by isopods and amphipods, and dietary breadth was low and not significantly different between locations and seasons. Tubenose goby diet strongly overlapped with that of tadpole madtom (Noturus gyrinus), a native, demersal species. We tested several candidate growth models; the Gompertz Growth Function was the most parsimonious model among those examined. The model demonstrates that tubenose goby obtains a small maximum size and is short-lived. We conclude that tubenose goby presents a unique risk to the Great Lakes and other freshwater bodies because their life history is typical of invasive species, their diet overlaps with native fish, and because they occupy shallow, vegetated habitat which functions as both nursery and foraging habitat for many native fishes.
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Affiliation(s)
- Bradley Dawson
- University of Minnesota Duluth, 1035 Kirby Drive, Swenson Science Building, Duluth MN 55812, United States
| | - Greg Peterson
- US Environmental Protection Agency Great Lakes Toxicology and Ecology Division, 6201 Congdon Blvd., Duluth MN 55804, United States
| | - Thomas Hrabik
- University of Minnesota Duluth, 1035 Kirby Drive, Swenson Science Building, Duluth MN 55812, United States
| | - Joel Hoffman
- US Environmental Protection Agency Great Lakes Toxicology and Ecology Division, 6201 Congdon Blvd., Duluth MN 55804, United States
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Habitat selection patterns of a species at the edge - case study of the native racer goby population in Central Europe. Sci Rep 2019; 9:19670. [PMID: 31873170 PMCID: PMC6928068 DOI: 10.1038/s41598-019-56264-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2019] [Accepted: 12/04/2019] [Indexed: 11/08/2022] Open
Abstract
Invasive alien species are regarded a nuisance. This extends into a lack of conservation efforts in their native range. As a consequence, conservation of e.g. range-edge populations is neglected. Gobiidae have many representatives of alien species in European freshwaters, and therefore they have a bad reputation. Objectives of this study were to: define the habitat selection patterns of a species at the edge, and examine the ontogenetic variation in its distributions, i.e. spatial distribution of different size classes. A racer goby Babka gymnotrachelus (syn. Neogobius gymnotrachelus) population was selected for the model. In numerous European river basins, Ponto-Caspian racer goby has been an invasive alien species of interest to researchers for many years. Recently, however, native populations of the species have been described in the Polish tributary of the upper Dniester River (Black Sea basin). We used habitat data and densities of racer goby to disentangle the habitat selection patterns of the species at a river reach at the edge of its native range. Evident preferences towards habitats with large submerged objects serving as hiding places were characteristic of the largest gobies. Adult, largest gobies were very likely to choose the 'boulders' site, while forcing smaller individuals to occupy places with faster water current, i.e. less suitable in terms of saving energy. At a larger geographic scale, a significant portion of the submountain river was unsuitable for racer gobies. At the edge of the racer goby range, patches providing habitats suitable for the species were scarce and scattered. With regard to invasive populations, the presence of stony bottoms, quite certainly cannot be considered as a factor excluding potential colonisation by racer goby, and in submountain rivers it might be the preferred kind of bottom.
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Stepien CA, Snyder MR, Elz AE. Invasion genetics of the silver carp Hypophthalmichthys molitrix across North America: Differentiation of fronts, introgression, and eDNA metabarcode detection. PLoS One 2019; 14:e0203012. [PMID: 30917127 PMCID: PMC6436794 DOI: 10.1371/journal.pone.0203012] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2018] [Accepted: 03/05/2019] [Indexed: 11/19/2022] Open
Abstract
In the 1970s, the introduced silver carp Hypophthalmichthys molitrix (which is indigenous to eastern Asia) escaped from southern U.S. aquaculture to spread throughout the Mississippi River basin, and since has steadily moved northward. This large, prolific filter-feeder reduces food availability for other fishes. It now has reached the threshold of the Laurentian Great Lakes, where it likely will significantly impact food chains and fisheries. Our study evaluates population genetic variability and differentiation of the silver carp using 10 nuclear DNA microsatellite loci, and sequences of two mitochondrial genes-cytochrome b and cytochrome c oxidase subunit 1, along with the nuclear ribosomal protein S7 gene intron 1. We analyze population samples from: two primary Great Lakes' invasion fronts (at the Illinois River outside of Chicago, IL in Lake Michigan and in the Wabash River, which leads into the Maumee River and western Lake Erie), the original establishment "core" in the Lower Mississippi River, and expansion areas in the Upper Mississippi and Missouri rivers. We analyze and compare our results with bighead and other invasive carps, and cyprinid relatives. Results reveal that the silver carp invasion possesses moderate levels of genetic diversity, with more mtDNA haplotypes and unique microsatellite alleles in the "core" Lower Mississippi River population, which also diverges the most. The two invasion fronts also significantly genetically differ. About 3% of individuals (including all populations except the Illinois River) contain a unique and very divergent mtDNA haplotype, which likely stems from historic introgression in Asia with female largescale silver carp H. harmandi. The nuclear microsatellites and S7 sequences of the introgressed individuals do not differ from silver carp and are very distant from bighead carp. These sequence variation data are employed to design and evaluate a targeted high-throughput metabarcoding sequence assay that identifies and distinguishes among species of invasive carps (i.e., silver, bighead, grass, black, and common carps, along with goldfish), as well as native cyprinids, using cytochrome b. Our assay further differentiates among selected silver carp haplotypes (including between H. molitrix and H. harmandi), for use in population genetics and future analyses of spread pathways. We test and evaluate this assay on environmental (e)DNA water samples from 48 bait shops in the Great Lakes' region (along the Lake Erie, Lake St. Clair, and Wabash River watersheds), using positive and negative controls and custom bioinformatic processing. Test results discern silver carp eDNA in four of the shops-three in Lake Erie and one in the Wabash River watershed-and bighead carp from one of the same Lake Erie venues, suggesting that retailers (who often source from established southerly populations) comprise another introduction vector. Our overall findings thus provide key population genetic and phylogenetic data for understanding and tracing introductions, vectors, and spread pathways for silver carp, their variants, and their relatives.
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Affiliation(s)
- Carol A. Stepien
- NOAA Pacific Marine Environmental Laboratory, Genetics and Genomics Group (G3), Seattle, WA, United States of America
| | - Matthew R. Snyder
- NOAA Pacific Marine Environmental Laboratory, Genetics and Genomics Group (G3), Seattle, WA, United States of America
| | - Anna E. Elz
- NOAA Pacific Marine Environmental Laboratory, Genetics and Genomics Group (G3), Seattle, WA, United States of America
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Hunter ME, Johnson NA, Smith BJ, Davis MC, Butterfield JSS, Snow RW, Hart KM. Cytonuclear discordance in the Florida Everglades invasive Burmese python ( Python bivittatus) population reveals possible hybridization with the Indian python ( P. molurus). Ecol Evol 2018; 8:9034-9047. [PMID: 30271564 PMCID: PMC6157680 DOI: 10.1002/ece3.4423] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2017] [Revised: 06/08/2018] [Accepted: 06/22/2018] [Indexed: 12/04/2022] Open
Abstract
The invasive Burmese python (Python bivittatus) has been reproducing in the Florida Everglades since the 1980s. These giant constrictor snakes have caused a precipitous decline in small mammal populations in southern Florida following escapes or releases from the commercial pet trade. To better understand the invasion pathway and genetic composition of the population, two mitochondrial (mtDNA) loci across 1,398 base pairs were sequenced on 426 snakes and 22 microsatellites were assessed on 389 snakes. Concatenated mtDNA sequences produced six haplotypes with an average nucleotide and haplotype diversity of π = 0.002 and h = 0.097, respectively. Samples collected in Florida from morphologically identified P. bivittatus snakes were similar to published cytochrome oxidase 1 and cytochrome b sequences from both P. bivittatus and Python molurus and were highly divergent (genetic distances of 5.4% and 4.3%, respectively). The average number of microsatellite alleles and expected heterozygosity were N A = 5.50 and H E = 0.60, respectively. Nuclear Bayesian assignment tests supported two genetically distinct groups and an admixed group, not geographically differentiated. The effective population size (N E = 315.1) was lower than expected for a population this large, but reflected the low genetic diversity overall. The patterns of genetic diversity between mtDNA and microsatellites were disparate, indicating nuclear introgression of separate mtDNA lineages corresponding to cytonuclear discordance. The introgression likely occurred prior to the invasion, but genetic information on the native range and commercial trade is needed for verification. Our finding that the Florida python population is comprised of distinct lineages suggests greater standing variation for adaptation and the potential for broader areas of suitable habitat in the invaded range.
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Affiliation(s)
- Margaret E. Hunter
- U.S. Geological SurveyWetland and Aquatic Research CenterGainesvilleFlorida
| | - Nathan A. Johnson
- U.S. Geological SurveyWetland and Aquatic Research CenterGainesvilleFlorida
| | - Brian J. Smith
- Wetland and Aquatic Research CenterCherokee Nation TechnologiesDavieFlorida
| | - Michelle C. Davis
- U.S. Geological SurveyWetland and Aquatic Research CenterGainesvilleFlorida
| | | | - Ray W. Snow
- U.S. National Park ServiceEverglades National ParkHomesteadFlorida
| | - Kristen M. Hart
- U.S. Geological SurveyWetland and Aquatic Research CenterDavieFlorida
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Wellband KW, Pettitt-Wade H, Fisk AT, Heath DD. Standing genetic diversity and selection at functional gene loci are associated with differential invasion success in two non-native fish species. Mol Ecol 2018; 27:1572-1585. [PMID: 29573310 DOI: 10.1111/mec.14557] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2017] [Revised: 02/25/2018] [Accepted: 03/07/2018] [Indexed: 12/30/2022]
Abstract
Invasive species are expected to experience a unique combination of high genetic drift due to demographic factors while also experiencing strong selective pressures. The paradigm that reduced genetic diversity should limit the evolutionary potential of invasive species, and thus, their potential for range expansion has received little empirical support, possibly due to the choice of genetic markers. Our goal was to test for effects of genetic drift and selection at functional genetic markers as they relate to the invasion success of two paired invasive goby species, one widespread (successful) and one with limited range expansion (less successful). We genotyped fish using two marker types: single nucleotide polymorphisms (SNPs) in known-function, protein-coding genes and microsatellites to contrast the effects of neutral genetic processes. We identified reduced allelic variation in the invaded range for the less successful tubenose goby. SNPs putatively under selection were responsible for the observed differences in population structure between marker types for round goby (successful) but not tubenose goby (less successful). A higher proportion of functional loci experienced divergent selection for round goby, suggesting increased evolutionary potential in invaded ranges may be associated with round goby's greater invasion success. Genes involved in thermal tolerance were divergent for round goby populations but not tubenose goby, consistent with the hypothesis that invasion success for fish in temperate regions is influenced by capacity for thermal tolerance. Our results highlight the need to incorporate functional genetic markers in studies to better assess evolutionary potential for the improved conservation and management of species.
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Affiliation(s)
- Kyle W Wellband
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON, Canada
| | - Harri Pettitt-Wade
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON, Canada
| | - Aaron T Fisk
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON, Canada
| | - Daniel D Heath
- Great Lakes Institute for Environmental Research, University of Windsor, Windsor, ON, Canada.,Department of Biological Sciences, University of Windsor, Windsor, ON, Canada
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Milá B, Van Tassell JL, Calderón JA, Rüber L, Zardoya R. Cryptic lineage divergence in marine environments: genetic differentiation at multiple spatial and temporal scales in the widespread intertidal goby Gobiosoma bosc. Ecol Evol 2017; 7:5514-5523. [PMID: 28770087 PMCID: PMC5528222 DOI: 10.1002/ece3.3161] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2017] [Revised: 05/22/2017] [Accepted: 05/23/2017] [Indexed: 01/01/2023] Open
Abstract
The adaptive radiation of the seven-spined gobies (Gobiidae: Gobiosomatini) represents a classic example of how ecological specialization and larval retention can drive speciation through local adaptation. However, geographically widespread and phenotypically uniform species also do occur within Gobiosomatini. This lack of phenotypic variation across large geographic areas could be due to recent colonization, widespread gene flow, or stabilizing selection acting across environmental gradients. We use a phylogeographic approach to test these alternative hypotheses in the naked goby Gobiosoma bosc, a widespread and phenotypically invariable intertidal fish found along the Atlantic Coast of North America. Using DNA sequence from 218 individuals sampled at 15 localities, we document marked intraspecific genetic structure in mitochondrial and nuclear genes at three main geographic scales: (i) between Gulf of Mexico and Atlantic Coast, (ii) between the west coast of the Florida peninsula and adjacent Gulf of Mexico across the Apalachicola Bay, and (iii) at local scales of a few hundred kilometers. Clades on either side of Florida diverged about 8 million years ago, whereas some populations along the East Cost show divergent phylogroups that have differentiated within the last 200,000 years. The absence of noticeable phenotypic or ecological differentiation among lineages suggests the role of stabilizing selection on ancestral phenotypes, together with isolation in allopatry due to reduced dispersal and restricted gene flow, as the most likely explanation for their divergence. Haplotype phylogenies and spatial patterns of genetic diversity reveal frequent population bottlenecks followed by rapid population growth, particularly along the Gulf of Mexico. The magnitude of the genetic divergence among intraspecific lineages suggests the existence of cryptic species within Gobiosoma and indicates that modes of speciation can vary among lineages within Gobiidae.
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Affiliation(s)
- Borja Milá
- National Museum of Natural SciencesSpanish National Research Council (CSIC)MadridSpain
| | - James L. Van Tassell
- Department of IchthyologyAmerican Museum of Natural HistoryNew York, NY 10024USA
| | - Jatziri A. Calderón
- National Museum of Natural SciencesSpanish National Research Council (CSIC)MadridSpain
| | - Lukas Rüber
- Naturhistorisches Museum der BurgergemeindeBernBernastrasse 15, 3005 BernSwitzerland
- Institute of Ecology and EvolutionUniversity of BernBaltzerstrasse 6, 3012 BernSwitzerland
| | - Rafael Zardoya
- National Museum of Natural SciencesSpanish National Research Council (CSIC)MadridSpain
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11
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Wellband KW, Pettitt-Wade H, Fisk AT, Heath DD. Differential invasion success in aquatic invasive species: the role of within- and among-population genetic diversity. Biol Invasions 2017. [DOI: 10.1007/s10530-017-1471-8] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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12
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Wellband KW, Heath DD. Plasticity in gene transcription explains the differential performance of two invasive fish species. Evol Appl 2017; 10:563-576. [PMID: 28616064 PMCID: PMC5469171 DOI: 10.1111/eva.12463] [Citation(s) in RCA: 43] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2016] [Accepted: 01/28/2017] [Indexed: 01/06/2023] Open
Abstract
Phenotypic plasticity buffers organisms from environmental change and is hypothesized to aid the initial establishment of nonindigenous species in novel environments and postestablishment range expansion. The genetic mechanisms that underpin phenotypically plastic traits are generally poorly characterized; however, there is strong evidence that modulation of gene transcription is an important component of these responses. Here, we use RNA sequencing to examine the transcriptional basis of temperature tolerance for round and tubenose goby, two nonindigenous fish species that differ dramatically in the extent of their Great Lakes invasions despite similar invasion dates. We used generalized linear models of read count data to compare gene transcription responses of organisms exposed to increased and decreased water temperature from those at ambient conditions. We identify greater response in the magnitude of transcriptional changes for the more successful round goby compared with the less successful tubenose goby. Round goby transcriptional responses reflect alteration of biological function consistent with adaptive responses to maintain or regain homeostatic function in other species. In contrast, tubenose goby transcription patterns indicate a response to stressful conditions, but the pattern of change in biological functions does not match those expected for a return to homeostatic status. Transcriptional plasticity plays an important role in the acute thermal tolerance for these species; however, the impaired response to stress we demonstrate in the tubenose goby may contribute to their limited invasion success relative to the round goby. Transcriptional profiling allows the simultaneous assessment of the magnitude of transcriptional response as well as the biological functions involved in the response to environmental stress and is thus a valuable approach for evaluating invasion potential.
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Affiliation(s)
- Kyle W Wellband
- Great Lakes Institute for Environmental Research University of Windsor Windsor ON Canada
| | - Daniel D Heath
- Great Lakes Institute for Environmental Research University of Windsor Windsor ON Canada.,Department of Biological Sciences University of Windsor Windsor ON Canada
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13
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Adrian-Kalchhauser I, Svensson O, Kutschera VE, Alm Rosenblad M, Pippel M, Winkler S, Schloissnig S, Blomberg A, Burkhardt-Holm P. The mitochondrial genome sequences of the round goby and the sand goby reveal patterns of recent evolution in gobiid fish. BMC Genomics 2017; 18:177. [PMID: 28209125 PMCID: PMC5314710 DOI: 10.1186/s12864-017-3550-8] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2016] [Accepted: 02/02/2017] [Indexed: 11/15/2022] Open
Abstract
Background Vertebrate mitochondrial genomes are optimized for fast replication and low cost of RNA expression. Accordingly, they are devoid of introns, are transcribed as polycistrons and contain very little intergenic sequences. Usually, vertebrate mitochondrial genomes measure between 16.5 and 17 kilobases (kb). Results During genome sequencing projects for two novel vertebrate models, the invasive round goby and the sand goby, we found that the sand goby genome is exceptionally small (16.4 kb), while the mitochondrial genome of the round goby is much larger than expected for a vertebrate. It is 19 kb in size and is thus one of the largest fish and even vertebrate mitochondrial genomes known to date. The expansion is attributable to a sequence insertion downstream of the putative transcriptional start site. This insertion carries traces of repeats from the control region, but is mostly novel. To get more information about this phenomenon, we gathered all available mitochondrial genomes of Gobiidae and of nine gobioid species, performed phylogenetic analyses, analysed gene arrangements, and compared gobiid mitochondrial genome sizes, ecological information and other species characteristics with respect to the mitochondrial phylogeny. This allowed us amongst others to identify a unique arrangement of tRNAs among Ponto-Caspian gobies. Conclusions Our results indicate that the round goby mitochondrial genome may contain novel features. Since mitochondrial genome organisation is tightly linked to energy metabolism, these features may be linked to its invasion success. Also, the unique tRNA arrangement among Ponto-Caspian gobies may be helpful in studying the evolution of this highly adaptive and invasive species group. Finally, we find that the phylogeny of gobiids can be further refined by the use of longer stretches of linked DNA sequence. Electronic supplementary material The online version of this article (doi:10.1186/s12864-017-3550-8) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Irene Adrian-Kalchhauser
- Program Man-Society-Environment, Department of Environmental Sciences, University of Basel, Vesalgasse 1, Basel, 4051, Switzerland.
| | - Ola Svensson
- Department of Biological and Environmental Sciences, University of Gothenburg, Medicinaregatan 18A, 41390, Göteborg, Sweden.,The Linnaeus Centre for Marine Evolutionary Biology, University of Gothenburg, P.O. Box 460, 40530, Gothenburg, Sweden
| | - Verena E Kutschera
- Department of Evolutionary Biology, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18D, 75236, Uppsala, Sweden
| | - Magnus Alm Rosenblad
- The Linnaeus Centre for Marine Evolutionary Biology, University of Gothenburg, P.O. Box 460, 40530, Gothenburg, Sweden.,Department of Marine Sciences, NBIS Bioinformatics Infrastructure for Life Sciences, University of Gothenburg, Medicinaregatan 9C, 41390, Gothenburg, Sweden
| | - Martin Pippel
- Heidelberg Institute for Theoretical Studies, Schloss-Wolfsbrunnenweg 35, 69118, Heidelberg, Germany
| | - Sylke Winkler
- Max Planck Institute of Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307, Dresden, Germany
| | - Siegfried Schloissnig
- Heidelberg Institute for Theoretical Studies, Schloss-Wolfsbrunnenweg 35, 69118, Heidelberg, Germany
| | - Anders Blomberg
- The Linnaeus Centre for Marine Evolutionary Biology, University of Gothenburg, P.O. Box 460, 40530, Gothenburg, Sweden.,Department of Marine Sciences, University of Gothenburg, Medicinaregatan 9C, 41390, Gothenburg, Sweden
| | - Patricia Burkhardt-Holm
- Program Man-Society-Environment, Department of Environmental Sciences, University of Basel, Vesalgasse 1, Basel, 4051, Switzerland.,Department of Biological Sciences, University of Alberta, 11455 Saskatchewan Drive, Edmonton, AB, Canada
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14
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Snyder MR, Stepien CA. Genetic patterns across an invasion's history: a test of change versus stasis for the Eurasian round goby in North America. Mol Ecol 2017; 26:1075-1090. [PMID: 28029720 DOI: 10.1111/mec.13997] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2016] [Revised: 12/05/2016] [Accepted: 12/12/2016] [Indexed: 01/11/2023]
Abstract
Biological invasions comprise accidental evolutionary experiments, whose genetic compositions underlie relative success, spread and persistence in new habitats. However, little is known about whether, or how, their population genetic patterns change temporally and/or spatially across the invasion's history. Theory predicts that most would undergo founder effect, exhibit low genetic divergence across the new range and gain variation over time via new arriving propagules. To test these predictions, we analyse population genetic diversity and divergence patterns of the Eurasian round goby Neogobius melanostomus across the two decades of its North American invasion in the Laurentian Great Lakes, comparing results from 13 nuclear DNA microsatellite loci and mitochondrial DNA cytochrome b sequences. We test whether 'genetic stasis', 'genetic replacement' and/or 'genetic supplement' scenarios have occurred at the invasion's core and expansion sites, in comparison with its primary native source population in the Dnieper River, Black Sea. Results reveal pronounced genetic divergence across the exotic range, with population areas remaining genetically distinct and statistically consistent across two decades, supporting 'genetic stasis' and 'founder takes most'. The original genotypes continue to predominate, whose high population growth likely outpaced the relative success of later arrivals. The original invasion core has stayed the most similar to the native source. Secondary expansion sites indicate slight allelic composition convergence towards the core population over time, attributable to some early 'genetic supplementation'. The geographic and temporal coverage of this investigation offers a rare opportunity to discern population dynamics over time and space in context of invasion genetic theory vs. reality.
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Affiliation(s)
- Matthew R Snyder
- Great Lakes Genetics/Genomics Laboratory, The Lake Erie Center and Department of Environmental Sciences, The University of Toledo, Toledo, OH, 43606, USA.,NOAA Pacific Marine Environmental Laboratory, 7600 Sand Point Way NE, Seattle, WA, 98115, USA
| | - Carol A Stepien
- Great Lakes Genetics/Genomics Laboratory, The Lake Erie Center and Department of Environmental Sciences, The University of Toledo, Toledo, OH, 43606, USA.,NOAA Pacific Marine Environmental Laboratory, 7600 Sand Point Way NE, Seattle, WA, 98115, USA
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15
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Gyrodactylus proterorhini in its non-native range: distribution and ability to host-switch in freshwaters. Parasitol Res 2016; 115:3153-62. [DOI: 10.1007/s00436-016-5073-7] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2016] [Accepted: 04/14/2016] [Indexed: 10/21/2022]
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16
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Adrian-Kalchhauser I, Hirsch PE, Behrmann-Godel J, N'Guyen A, Watzlawczyk S, Gertzen S, Borcherding J, Burkhardt-Holm P. The invasive bighead goby Ponticola kessleri displays large-scale genetic similarities and small-scale genetic differentiation in relation to shipping patterns. Mol Ecol 2016; 25:1925-43. [PMID: 26928748 DOI: 10.1111/mec.13595] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2015] [Revised: 02/12/2016] [Accepted: 02/17/2016] [Indexed: 12/11/2022]
Abstract
Colonization events, range expansions and species invasions leave genetic signatures in the genomes of invasive organisms and produce intricate special patterns. Predictions have been made as to how those patterns arise, but only very rarely, genetic processes can be monitored in real time during range expansions. In an attempt to change that, we track a very recently established invasive population of a fish species, the bighead goby Ponticola kessleri, with high temporal and spatial resolution through 2 years to identify patterns over time. We then compare Swiss and German samples of bighead goby along the river Rhine using microsatellites, mitochondrial D-loop sequences and geometric morphometrics to investigate geographic patterns. We detect weak temporal and strong geographic patterns in the data, which are inconsistent with isolation by distance and indicate long range transport. In search of an explanation for our observations, we analyse the vector properties and travel patterns of commercial vessels on the river Rhine. We present evidence that freshwater cargo ships and tankers are plausible vectors for larvae of invasive goby species. We also present indications that cargo ships and tankers act as differential vectors for this species. In summary, we present genetic data at unique temporal resolution from a vertebrate invasion front and substantiate the paramount role of commercial shipping in freshwater fish translocations.
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Affiliation(s)
- I Adrian-Kalchhauser
- Program Man-Society-Environment, Department of Environmental Sciences, University of Basel, Vesalgasse 1, CH-4051, Basel, Switzerland
| | - P E Hirsch
- Program Man-Society-Environment, Department of Environmental Sciences, University of Basel, Vesalgasse 1, CH-4051, Basel, Switzerland.,Research Centre for Sustainable Energy and Water Supply, University of Basel, Peter Merian Weg 6, CH-4002, Basel, Switzerland
| | - J Behrmann-Godel
- Limnological Institute, University of Konstanz, Mainaustrasse 252, D-78457, Konstanz, Germany
| | - A N'Guyen
- Program Man-Society-Environment, Department of Environmental Sciences, University of Basel, Vesalgasse 1, CH-4051, Basel, Switzerland
| | - S Watzlawczyk
- Zoological Institute of the University of Cologne, Department of General Ecology & Limnology, Ecological Field Station Grietherbusch, D-50923, Cologne, Germany
| | - S Gertzen
- Zoological Institute of the University of Cologne, Department of General Ecology & Limnology, Ecological Field Station Grietherbusch, D-50923, Cologne, Germany
| | - J Borcherding
- Zoological Institute of the University of Cologne, Department of General Ecology & Limnology, Ecological Field Station Grietherbusch, D-50923, Cologne, Germany
| | - P Burkhardt-Holm
- Program Man-Society-Environment, Department of Environmental Sciences, University of Basel, Vesalgasse 1, CH-4051, Basel, Switzerland.,Department of Biological Sciences, University of Alberta, 11455 Saskatchewan Drive, Edmonton, AB, Canada
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17
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Hou Z, Sket B. A review of Gammaridae (Crustacea: Amphipoda): the family extent, its evolutionary history, and taxonomic redefinition of genera. Zool J Linn Soc 2015. [DOI: 10.1111/zoj.12318] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Zhonge Hou
- Key Laboratory of Zoological Systematics and Evolution; Institute of Zoology; Chinese Academy of Sciences; Beijing 100101 China
| | - Boris Sket
- Department of Biology; Biotechnical Faculty; University of Ljubljana; PO Box 2995 Ljubljana SI-1001 Slovenia
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18
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Origins of softshell turtles in Hawaii with implications for conservation. CONSERV GENET 2015. [DOI: 10.1007/s10592-015-0772-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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19
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Hunter ME, Nico LG. Genetic analysis of invasive Asian Black Carp (Mylopharyngodon piceus) in the Mississippi River Basin: evidence for multiple introductions. Biol Invasions 2014. [DOI: 10.1007/s10530-014-0708-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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20
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Dubey S, Leuenberger J, Perrin N. Multiple origins of invasive and ‘native’ water frogs (Pelophylaxspp.) in Switzerland. Biol J Linn Soc Lond 2014. [DOI: 10.1111/bij.12283] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Sylvain Dubey
- Department of Ecology and Evolution; Biophore Bld; University of Lausanne; CH 1015 Lausanne Switzerland
| | - Julien Leuenberger
- Department of Ecology and Evolution; Biophore Bld; University of Lausanne; CH 1015 Lausanne Switzerland
| | - Nicolas Perrin
- Department of Ecology and Evolution; Biophore Bld; University of Lausanne; CH 1015 Lausanne Switzerland
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21
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Lindner K, Cerwenka AF, Brandner J, Gertzen S, Borcherding J, Geist J, Schliewen UK. First evidence for interspecific hybridization between invasive goby species Neogobius fluviatilis and Neogobius melanostomus (Teleostei: Gobiidae: Benthophilinae). JOURNAL OF FISH BIOLOGY 2013; 82:2128-34. [PMID: 23731157 DOI: 10.1111/jfb.12127] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2012] [Accepted: 03/14/2013] [Indexed: 05/16/2023]
Abstract
Two hybrids between the monkey goby Neogobius fluviatilis and the round goby Neogobius melanostomus from the Rhine River were identified by genotyping and morphological comparison. These are the first records of goby-hybrids outside the parent species' native ranges worldwide.
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Affiliation(s)
- K Lindner
- Zoologische Staatssammlung München (Bavarian State Collection of Zoology), Department of Ichthyology, München, Germany
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22
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Lynch MP, Mensinger AF. Temporal patterns in growth and survival of the round goby Neogobius melanostomus. JOURNAL OF FISH BIOLOGY 2013; 82:111-124. [PMID: 23331141 DOI: 10.1111/j.1095-8649.2012.03470.x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Monthly, overwinter and annual instantaneous growth rates for round goby Neogobius melanostomus were calculated with maximal growth occurring in July and August and almost no growth observed between ice appearance (October) and melt (March). Annual absolute growth rates averaged 27·3 ± 1·9 mm for males and 19·8 ± 2·4 mm for females. The most parsimonious Cormack-Jolly-Seber model indicated that both the survival and recapture probabilities were dependent on sampling date, but not sex. Survival estimates remained high throughout the 13 month study with a median weekly survival probability of 0·920 (25 and 75% quartiles: 0·767 and 0·991), an overwinter survival probability of 99% and an annual survival rate of 67%. Survival probabilities were lowest for both sexes near the completion of the N. melanostomus reproductive season in July and August which supports existing evidence of higher mortality after reproduction, while challenging the paradigm that male N. melanostomus suffer comparatively higher mortality as a result of reproduction than females. Evidence indicating that growth and mortality rates are highest at the end of the reproductive season not only highlights seasonal variability in N. melanostomus natural history, but may also guide the control of this invasive species to periods when they are most vulnerable.
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Affiliation(s)
- M P Lynch
- Department of Biology, University of Minnesota-Duluth, Duluth, MN 55812, USA
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23
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Krug PJ, Asif JH, Baeza I, Morley MS, Blom WM, Gosliner TM. Molecular identification of two species of the carnivorous sea slug Philine, invaders of the US west coast. Biol Invasions 2012. [DOI: 10.1007/s10530-012-0242-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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24
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Kornis MS, Mercado-Silva N, Vander Zanden MJ. Twenty years of invasion: a review of round goby Neogobius melanostomus biology, spread and ecological implications. JOURNAL OF FISH BIOLOGY 2012; 80:235-85. [PMID: 22268429 DOI: 10.1111/j.1095-8649.2011.03157.x] [Citation(s) in RCA: 144] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
The round goby Neogobius melanostomus is one of the most wide-ranging invasive fish on earth, with substantial introduced populations within the Laurentian Great Lakes watershed, the Baltic Sea and several major European rivers. Rapid expansion and deleterious ecosystem effects have motivated extensive research on this species; here this research is synthesized. Maps of the global distribution are provided and the invasion history of N. melanostomus, which spread more rapidly at first in North America, but has undergone substantial expansion over the past decade in the Baltic Sea, is summarized. Meta-analyses comparing their size at age, diet, competitors and predators in North American and European ecosystems are provided. Size at age is region specific, with saline habitats typically supporting larger and faster growing individuals than fresh water. Neogobius melanostomus prey differs substantially between regions, demonstrating a capacity to adapt to locally abundant food sources. Neogobius melanostomus comprise at least 50% of the diet of eight taxa in at least one site or life stage; in total, 16 predator taxa are documented from the Laurentian Great Lakes v. five from Eurasia. Invasive N. melanostomus are the only common forage fish to heavily exploit mussels in the Laurentian Great Lakes and the Baltic Sea, facilitating the transfer of energy from mussels to higher trophic levels in both systems. Neogobius melanostomus morphology, life history, reproduction, habitat preferences, environmental tolerances, parasites, environmental effects, sampling strategies and management are also discussed. Neogobius melanostomus inhabit a wide range of temperate freshwater and brackish-water ecosystems and will probably continue to spread via ballast water, accidental bait release and natural dispersal worldwide. Climate change will probably enhance N. melanostomus expansion by elevating water temperatures closer to its energetic optimum of 26° C. Future research needs are presented; most pressing are evaluating the economic effects of N. melanostomus invasion, determining long-term population level effects of egg predation on game-fish recruitment and comparing several variables (density, ecological effects morphology and life history) among invaded ecosystems. This review provides a central reference as researchers continue studying N. melanostomus, often as examples for advancing basic ecology and invasion biology.
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Affiliation(s)
- M S Kornis
- Center for Limnology, University of Wisconsin, Madison, WI 53706, USA.
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25
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Asif JH, Krug PJ. Lineage distribution and barriers to gene flow among populations of the globally invasive marine mussel Musculista senhousia. Biol Invasions 2011. [DOI: 10.1007/s10530-011-0169-6] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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26
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Sokołowska E, Fey DP. Age and growth of the round goby Neogobius melanostomus in the Gulf of Gdańsk several years after invasion. Is the Baltic Sea a new Promised Land? JOURNAL OF FISH BIOLOGY 2011; 78:1993-2009. [PMID: 21651546 DOI: 10.1111/j.1095-8649.2011.02986.x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
The ages of 8 to 23·5 cm total length (L(T)) round goby Neogobius melanostomus collected monthly during 2006 and 2007 in the Gulf of Gdańsk (Baltic Sea) ranged from 2 to 6 years, with age class 4+ years dominant. Males were larger at age than females. The fastest growth occurred in the first 2 years of life in both sexes. Females were heavier at a given L(T) than males, but only for fish > c. 15 cm. A strong relationship between N. melanostomus otolith size and fish size was found, with no difference between males and females, and a significant relationship between fish growth rate and otolith growth rate, which enabled backcalculation of growth rates. Marginal increment width analysis confirmed the periodicity of annual ring formation in otoliths and showed that the most intense opaque zone formation occurs in July to August, while hyaline zone formation starts as early as September to October. It was concluded that the N. melanostomus that have colonized the southern Baltic Sea exhibit the largest size and longest life span ever recorded for this species.
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Affiliation(s)
- E Sokołowska
- Department of Genetics and Marine Biotechnology, Institute of Oceanology of the Polish Academy of Sciences, ul. Powstańców Warszawy 55, Sopot 81-712, Poland
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27
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Neilson ME, Stepien CA. Historic speciation and recent colonization of Eurasian monkey gobies (Neogobius fluviatilis and N. pallasi) revealed by DNA sequences, microsatellites, and morphology. DIVERS DISTRIB 2011. [DOI: 10.1111/j.1472-4642.2011.00762.x] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
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28
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Expansion of tubenose gobies Proterorhinus semilunaris into western Lake Erie and potential effects on native species. Biol Invasions 2011. [DOI: 10.1007/s10530-011-9962-5] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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29
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Bronnenhuber JE, Dufour BA, Higgs DM, Heath DD. Dispersal strategies, secondary range expansion and invasion genetics of the nonindigenous round goby, Neogobius melanostomus, in Great Lakes tributaries. Mol Ecol 2011; 20:1845-59. [PMID: 21492265 DOI: 10.1111/j.1365-294x.2011.05030.x] [Citation(s) in RCA: 72] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Dispersal strategies are important mechanisms underlying the spatial distribution and colonizing ability of all mobile species. In the current study, we use highly polymorphic microsatellite markers to evaluate local dispersal and colonization dynamics of the round goby (Neogobius melanostomus), an aquatic invader expanding its range from lake to river environments in its introduced North American range. Genetic structure, genotype assignment and genetic diversity were compared among 1262 round gobies from 20 river and four lake sites in three Great Lakes tributaries. Our results indicate that a combination of short-distance diffusion and long-distance dispersal, collectively referred to as 'stratified dispersal', is facilitating river colonization. Colonization proceeded upstream yearly (approximately 500 m/year; 2005-2009) in one of two temporal replicates while genetic structure was temporally stable. Contiguous dispersal from the lake was observed in all three rivers with a substantial portion of river fish (7.3%) identified as migrants. Genotype assignment indicated a separate introduction occurred upstream of the invasion front in one river. Genetic diversity was similar and relatively high among lake and recently colonized river populations, indicating that founder effects are mitigated through a dual-dispersal strategy. The remarkable success of round goby as an aquatic invader stresses the need for better diffusion models of secondary range expansion for presumably sessile invasive species.
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Affiliation(s)
- Jennifer E Bronnenhuber
- Great Lakes Institute for Environmental Research, University of Windsor, 401 Sunset Ave. Windsor, ON N9B 3P4, Canada
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30
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Mierzejewska K, Martyniak A, Kakareko T, Dzika E, Stańczak K, Hliwa P. Gyrodactylus proterorhini Ergens, 1967 (Monogenoidea, Gyrodactylidae) in gobiids from the Vistula River—the first record of the parasite in Poland. Parasitol Res 2010; 108:1147-51. [PMID: 21153840 DOI: 10.1007/s00436-010-2175-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2010] [Accepted: 11/04/2010] [Indexed: 10/18/2022]
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31
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Recent emergence and worldwide spread of the red tomato spider mite, Tetranychus evansi: genetic variation and multiple cryptic invasions. Biol Invasions 2010. [DOI: 10.1007/s10530-010-9791-y] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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32
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Vélez-Espino LA, Koops MA, Balshine S. Invasion dynamics of round goby (Neogobius melanostomus) in Hamilton Harbour, Lake Ontario. Biol Invasions 2010. [DOI: 10.1007/s10530-010-9777-9] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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33
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Brown JE, Stepien CA. Population genetic history of the dreissenid mussel invasions: expansion patterns across North America. Biol Invasions 2010. [DOI: 10.1007/s10530-010-9763-2] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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34
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Condition status and parasite infection of Neogobius kessleri and N. melanostomus (Gobiidae) in their native and non-native area of distribution of the Danube River. Ecol Res 2010. [DOI: 10.1007/s11284-010-0716-0] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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35
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Grabowska J, Kotusz J, Witkowski A. Alien invasive fish species in Polish waters: an overview. FOLIA ZOOLOGICA 2010. [DOI: 10.25225/fozo.v59.i1.a1.2010] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- Joanna Grabowska
- Department of Ecology and Vertebrate Zoology, University of Lodz, Banacha 12/16, 90-237 Łódź, Poland
| | - Jan Kotusz
- Museum of Natural History, Wrocław University, Sienkiewicza 21, 50-335 Wroclaw, Poland;,
| | - Andrzej Witkowski
- Museum of Natural History, Wrocław University, Sienkiewicza 21, 50-335 Wroclaw, Poland;,
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Michael Mühlegger J, Jirsa F, Konecny R, Sattmann H, Frank C. Bucephalus polymorphus Baer, 1827 – a new fish parasite in Austria? Wien Klin Wochenschr 2009; 121 Suppl 3:50-2. [DOI: 10.1007/s00508-009-1236-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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37
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Parasites of Apollonia melanostoma (Pallas 1814) and Neogobius kessleri (Guenther 1861) (Osteichthyes, Gobiidae) from the Danube River in Austria. J Helminthol 2009; 84:87-92. [PMID: 19627624 DOI: 10.1017/s0022149x09990095] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Two invasive fish species, the round goby Apollonia melanostoma syn. Neogobius melanostomus (Pallas 1814) and the bighead goby Neogobius kessleri (Günther, 1861), have established a firm population in Austrian waters during the past 15 years. As there have been no records of the parasite fauna from these populations, a total of 79 specimens of A. melanostoma and 12 specimens of N. kessleri were examined for parasites between May and October 2007 from three different sampling sites from the Danube River in Austria. In total 12 parasite taxa were recovered. The protozoans Trichodina sp. and Ichthyophthirius multifiliis from the gills and skin; two crustacean species, Paraergasilus brevidigitus and Ergasilus sieboldi, from the gills; and the two monogeneans Gyrodactylus sp. and Dactylogyrus sp., from the skin and gills respectively, all occurred at low prevalence and intensities. Furthermore, cystacanths of the acanthocephalan Acanthocephalus lucii were found in the body cavity. Metacercariae of the digeneans Diplostomum sp. and Tylodelphys clavata were found in the lens of the eye and the vitreous humour, respectively. Adults of two digeneans, Nicolla skrjabini and Bunodera nodulosa, were found in the intestine. In addition, during this survey metacercariae of the Holarctic digenean Bucephalus polymorphus, encysted in the skin and fins, with prevalence up to 78%, were recorded for the first time in Austria.
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Neilson ME, Stepien CA. Escape from the Ponto-Caspian: Evolution and biogeography of an endemic goby species flock (Benthophilinae: Gobiidae: Teleostei). Mol Phylogenet Evol 2009; 52:84-102. [DOI: 10.1016/j.ympev.2008.12.023] [Citation(s) in RCA: 82] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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NEILSON MATTHEWE, STEPIEN CAROLA. Evolution and phylogeography of the tubenose goby genus Proterorhinus (Gobiidae: Teleostei): evidence for new cryptic species. Biol J Linn Soc Lond 2009. [DOI: 10.1111/j.1095-8312.2008.01135.x] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Feldheim KA, Willink P, Brown JE, Murphy DJ, Neilson ME, Stepien CA. Microsatellite loci for Ponto-Caspian gobies: markers for assessing exotic invasions. Mol Ecol Resour 2009; 9:639-44. [PMID: 21564715 DOI: 10.1111/j.1755-0998.2008.02495.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We developed and tested eight polymorphic microsatellite loci for Ponto-Caspian 'neogobiin' gobies, many of which are invasive in Eurasia and North America, whose study will aid understanding of the population genetics underlying their success. We tested samples from one to two locations from 12 taxa in the recently revised genera Babka, Benthophilus, Mesogobius, Neogobius = Apollonia, Ponticola and Proterorhinus; including the bighead, Caspian, knout, monkey, racer, round, tadpole and tubenose gobies; and taxa from introduced vs. native populations, those diverging between fresh and marine waters, and those differentiated between the Black and Caspian Seas. Populations conformed to Hardy-Weinberg equilibrium expectations, averaging five to 15 alleles per locus and 0.11 to 0.67 mean heterozygosity. Allelic variation significantly differentiated among all taxa and populations.
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Affiliation(s)
- Kevin A Feldheim
- Field Museum of Natural History, 1400 South Lake Shore Drive, Chicago, IL 60605, USA Lake Erie Center and the Department of Environmental Sciences, The University of Toledo, 6200 Bayshore Road, Toledo, OH 43618, USA
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Brown JE, Stepien CA. Invasion genetics of the Eurasian round goby in North America: tracing sources and spread patterns. Mol Ecol 2009; 18:64-79. [PMID: 19140965 DOI: 10.1111/j.1365-294x.2008.04014.x] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The Eurasian round goby Neogobius melanostomus (Apollonia melanostoma) invaded the North American Great Lakes in 1990 through ballast water, spread rapidly, and now is widely distributed and moving through adjacent tributaries. We analyse its genetic diversity and divergence patterns among 25 North American (N = 744) and 22 Eurasian (N = 414) locations using mitochondrial DNA cytochrome b gene sequences and seven nuclear microsatellite loci in order to: (i) identify the invasion's founding source(s), (ii) test for founder effects, (iii) evaluate whether the invasive range is genetically heterogeneous, and (iv) determine whether fringe and central areas differ in genetic diversity. Tests include F(ST) analogues, neighbour-joining trees, haplotype networks, Bayesian assignment, Monmonier barrier analysis, and three-dimensional factorial correspondence analysis. We recovered 13 cytochrome b haplotypes and 232 microsatellite alleles in North America and compared these to variation we previously described across Eurasia. Results show: (i) the southern Dnieper River population was the primary Eurasian donor source for the round goby's invasion of North America, likely supplemented by some alleles from the Dniester and Southern Bug rivers, (ii) the overall invasion has high genetic diversity and experienced no founder effect, (iii) there is significant genetic structuring across North America, and (iv) some expansion areas show reduced numbers of alleles, whereas others appear to reflect secondary colonization. Sampling sites in Lake Huron's Saginaw Bay and Lake Ontario significantly differ from all others, having unique alleles that apparently originated from separate introductions. Substantial genetic variation, multiple founding sources, large number of propagules, and population structure thus likely aided the goby's ecological success.
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Affiliation(s)
- Joshua E Brown
- Great Lakes Genetics Laboratory, Lake Erie Center and Department of Environmental Sciences, University of Toledo, 6200 Bayshore Rd, Toledo, OH 43618, USA
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Fernie KJ, King RB, Drouillard KG, Stanford KM. Temporal and spatial patterns of contaminants in Lake Erie watersnakes (Nerodia sipedon insularum) before and after the round goby (Apollonia melanostomus) invasion. THE SCIENCE OF THE TOTAL ENVIRONMENT 2008; 406:344-351. [PMID: 18771794 DOI: 10.1016/j.scitotenv.2008.07.027] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2008] [Revised: 07/15/2008] [Accepted: 07/17/2008] [Indexed: 05/26/2023]
Abstract
Temporal and spatial trends in contaminant concentrations were assessed in Lake Erie watersnakes, a threatened (USA)/endangered (Canada) species restricted to western Lake Erie. Temporal changes in plasma contaminant levels were determined in 1990 and 2003, and spatial patterns in 2003 at 12 sites, throughout the species' range. During this period, the watersnakes' diet changed from fish (75%) and amphibians (25%) that avoid zebra mussels, to round gobies (95%) that feed extensively on zebra mussels. Temporal trends indicate that watersnakes on Pelee and North Bass Islands showed a marginal increase in hexachlorobenzene levels, and a significant decline in dieldrin, oxychlordane, and heptachlor epoxide, likely reflecting declines in aerial deposition and clearing of local vineyards. The contaminants with the greatest burdens, sum PCBs and p,p'-DDE, remained stable in the snakes, consistent with trends in other local biota, suggesting that although the dietary switch to round gobies meant consumption of a more contaminated diet, their diet remained at the same trophic position. We suggest that the watersnakes' PCB and p,p'-DDE temporal patterns reflect the lack of change in sediment concentrations with minimal influence from their dietary switch. Similar to top avian predators, PCBs, p,p'-DDE, and technical chlordane, are most prevalent in watersnakes; this ranking remains unchanged. In 2003, the watersnakes demonstrated significant spatial differences in concentrations of p,p'-DDE, dieldrin, technical chlordane and its metabolites. Their 2003 concentrations of p,p'-DDE, and to a lesser extent PCBs, exceed the recommended interim no-observable effects levels on watersnake embryonic survival. Further investigations are required to determine if these higher levels of PCBs, p,p'-DDE, and technical chlordane, affect reproductive and physiological parameters of the Lake Erie watersnake. Until concentrations of sediment contaminants decline in western Lake Erie, these endangered/threatened watersnakes will continue to be exposed to higher concentrations of persistent organic pollutants.
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Affiliation(s)
- K J Fernie
- Canadian Wildlife Service, Environment Canada, 867 Lakeshore Road, Burlington, ON, Canada L7R 4A6.
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Genetic analysis reveals multiple cryptic invasive species of the hydrozoan genus Cordylophora. Biol Invasions 2008. [DOI: 10.1007/s10530-008-9365-4] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Brown JE, Stepien CA. Ancient divisions, recent expansions: phylogeography and population genetics of the round goby Apollonia melanostoma. Mol Ecol 2008; 17:2598-615. [PMID: 18466236 DOI: 10.1111/j.1365-294x.2008.03777.x] [Citation(s) in RCA: 66] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
During the past two decades, the round goby Apollonia melanostoma (=Neogobius melanostomus) has expanded its range via shipping transport and canals, extending north and west from the Ponto-Caspian region of Eurasia and to the North American Great Lakes. Exotic populations of the round goby have been very successful in the Baltic Sea and the Great Lakes regions, exerting significant ecological changes. Our study evaluates the population genetic and biogeographical structure of the round goby across its native and nonindigenous ranges, in light of geological history and its expansion pathways. We analyzed seven new nuclear microsatellite loci and mitochondrial DNA cytochrome b gene sequences from 432 individuals in 22 locations. Population structure was tested using F(ST)-analogs, phylogenetic trees, clustering diagrams, Bayesian assignment tests and nested clade analyses. Results show that native populations in the Black vs. the Caspian Sea basins diverge by 1.4% and c. 350,000 years, corresponding to closure of their prior connections and supporting the taxonomic separation of the Black Sea A. m. melanostoma from the Caspian Sea A. m. affinis. Their within-basin populations diverge by approximately 0.4% and 100,000 years. Nonindigenous populations in the Baltic Sea and Danube and Dnieper Rivers trace to separate northern Black Sea origins, whereas the upper Volga River system houses mixed populations of A. m. melanostoma and A. m. affinis. Native populations average twice the genetic diversity of most exotic sites; however, sites in the Volga River system have high diversity due to mixing of the two taxa. Our results highlight how vicariance and anthropogenic disturbances have shaped a rapidly expanding species' genetic heritage.
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Affiliation(s)
- Joshua E Brown
- Great Lakes Genetics Laboratory, Lake Erie Center and Department of Environmental Sciences, University of Toledo, 6200 Bayshore Road, Toledo, OH 43618, USA
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Wang C, Li S, Fu C, Gong X, Huang L, Song X, Zhao Y. Molecular genetic structure and evolution in native and colonized populations of the Chinese mitten crab, Eriocheir sinensis. Biol Invasions 2008. [DOI: 10.1007/s10530-008-9256-8] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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DUFOUR BRADLEYA, HOGAN TERRYM, HEATH DANIELD. Ten polymorphic microsatellite markers in the invasive round goby (Neogobius melanostomus) and cross-species amplification. ACTA ACUST UNITED AC 2007. [DOI: 10.1111/j.1471-8286.2007.01833.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Puillandre N, Dupas S, Dangles O, Zeddam JL, Capdevielle-Dulac C, Barbin K, Torres-Leguizamon M, Silvain JF. Genetic bottleneck in invasive species: the potato tuber moth adds to the list. Biol Invasions 2007. [DOI: 10.1007/s10530-007-9132-y] [Citation(s) in RCA: 73] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Schmid-Hempel P, Schmid-Hempel R, Brunner PC, Seeman OD, Allen GR. Invasion success of the bumblebee, Bombus terrestris, despite a drastic genetic bottleneck. Heredity (Edinb) 2007; 99:414-22. [PMID: 17551520 DOI: 10.1038/sj.hdy.6801017] [Citation(s) in RCA: 69] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Abstract
In early 1992, the European bumblebee, Bombus terrestris, was first seen in Tasmania and currently has spread to most of the island. Here, we report on the genetic structure, using micro-satellites, of the invading population from samples collected in the years 1998-2000, a few years after the first sighting of the species in its new area. The data show that the Tasmanian population has a very low genetic diversity, with less than half of the allelic richness (Richness=2.89 alleles; H(exp)=0.591) and lower levels of heterozygosity as compared to populations in New Zealand (4.24 alleles; H(exp)=0.729) and Europe (5.08 alleles; H(exp)=0.826). In addition, the genetic data suggest that the invasion must have happened once, probably around late 1991, and was the result of very few, perhaps only two, individuals arriving in Tasmania. Furthermore, these founders came from the New Zealand population. Today, the population in the south of Tasmania seems to act as a source population from which individuals migrate into other parts of the state. A similar source-sink structure seems also the case for New Zealand. The data show that B. terrestris is a highly invasive species capable of establishing itself even after a dramatic genetic bottleneck. B. terrestris may be an invasive species due to the haplo-diploid sex determination system, which exposes recessive, deleterious mutations to selection. Offspring of such purged lines may then be able to tolerate high levels of inbreeding.
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Affiliation(s)
- P Schmid-Hempel
- Wissenschaftskolleg zu Berlin (Institute for Advanced Study), Wallotstrasse, Berlin, Germany.
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McGlashan DJ, Ponniah M, Cassey P, Viard F. Clarifying marine invasions with molecular markers: an illustration based on mtDNA from mistaken calyptraeid gastropod identifications. Biol Invasions 2007. [DOI: 10.1007/s10530-007-9106-0] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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