Predatory impacts of alien decapod Crustacea are predicted by functional responses and explained by differences in metabolic rate

The LOTUS initiative for open knowledge management in natural products research

Contemporary bioinformatic and chemoinformatic capabilities hold promise to reshape knowledge management, analysis and interpretation of data in natural products research. Currently, reliance on a disparate set of non-standardized, insular, and specialized databases presents a series of challenges for data access, both within the discipline and for integration and interoperability between related fields. The fundamental elements of exchange are referenced structure-organism pairs that establish relationships between distinct molecular structures and the living organisms from which they were identified. Consolidating and sharing such information via an open platform has strong transformative potential for natural products research and beyond. This is the ultimate goal of the newly established LOTUS initiative, which has now completed the first steps toward the harmonization, curation, validation and open dissemination of 750,000+ referenced structure-organism pairs. LOTUS data is hosted on Wikidata and regularly mirrored on https://lotus.naturalproducts.net. Data sharing within the Wikidata framework broadens data access and interoperability, opening new possibilities for community curation and evolving publication models. Furthermore, embedding LOTUS data into the vast Wikidata knowledge graph will facilitate new biological and chemical insights. The LOTUS initiative represents an important advancement in the design and deployment of a comprehensive and collaborative natural products knowledge base.

Metabolic plasticity improves lobster's resilience to ocean warming but not to climate-driven novel species interactions

Marine species not only suffer from direct effects of warming oceans but also indirectly via the emergence of novel species interactions. While metabolic adjustments can be crucial to improve resilience to warming, it is largely unknown if this improves performance relative to novel competitors. We aimed to identify if spiny lobsters—inhabiting a global warming and species re-distribution hotspot—align their metabolic performance to improve resilience to both warming and novel species interactions. We measured metabolic and escape capacity of two Australian spiny lobsters, resident Jasus edwardsii and the range-shifting Sagmariasus verreauxi, acclimated to current average—(14.0 °C), current summer—(17.5 °C) and projected future summer—(21.5 °C) habitat temperatures. We found that both species decreased their standard metabolic rate with increased acclimation temperature, while sustaining their scope for aerobic metabolism. However, the resident lobster showed reduced anaerobic escape performance at warmer temperatures and failed to match the metabolic capacity of the range-shifting lobster. We conclude that although resident spiny lobsters optimise metabolism in response to seasonal and future temperature changes, they may be unable to physiologically outperform their range-shifting competitors. This highlights the critical importance of exploring direct as well as indirect effects of temperature changes to understand climate change impacts.

Divergent temperature-specific metabolic and feeding rates of native and invasive crayfish

Temperature is one of the most important factors governing the activity of ectothermic species, and it plays an important but less studied role in the manifestation of invasive species impacts. In this study, we investigated temperature-specific feeding and metabolic rates of invasive and native crayfish, and evaluated how temperature regulates their ecological impacts at present and in future according to different climatic scenarios by bioenergetics modelling. We conducted a series of maximum food consumption experiments and measured the metabolic rates of cold-adapted native noble crayfish (Astacus astacus) and invasive signal crayfish (Pacifastacus leniusculus) originally from a warmer environment over a temperature gradient resembling natural temperatures in Finland. The maximum feeding rates and routine metabolic rates (RMR) of native noble crayfish were significantly higher at low temperatures (< 10 °C than the rates of invasive signal crayfish. The RMRs of the species crossed at 18 °C, and the RMRs of signal crayfish were higher at temperatures above 18 °C. These findings indicate that the invader’s thermal niche has remained stable, and the potential impacts per capita are lower at suboptimal cold temperatures than for the native species. Our bioenergetics modelling showed that the direct annual predation impact of noble and signal crayfish seem similar, although the seasonal dynamics of the predation differs considerably between species. Our results highlight that the temperature-specific metabolic and feeding rates of species need to be taken into account in the impact assessment instead of simple generalisations of the direction or magnitude of impacts.

The combined effects of ocean acidification and warming on a habitat-forming shell-crushing predatory crab

In mid rocky intertidal habitats the mussel Perumytilus purpurarus monopolizes the substratum to the detriment of many other species. However, the consumption of mussels by the shell-crushing crab Acanthocyclus hassleri creates within the mussel beds space and habitat for several other species. This crab uses its disproportionately large claw to crush its shelled prey and plays an important role in maintaining species biodiversity. This study evaluated the consequences of projected near-future ocean acidification (OA) and warming (OW) on traits of A. hassleri linked with their predatory performance. Individual A. hassleri were maintained for 10-16 weeks under contrasting pCO₂ (~500 and 1400 μatm) and temperature (~15 and 20 °C) levels. We compared traits at the organismal (oxygen consumption rate, survival, calcification rate, feeding rates, crusher claw pinching strength, self-righting speed, sarcomere length of the crusher claw muscles) and cellular (nutritional status ATP provisioning capacity through citrate synthase activity, expression of HSP70) level. Survival, calcification rate and sarcomere length were not affected by OA and OW. However, OW increased significantly feeding and oxygen consumption. Pinching strength was reduced by OA; meanwhile self-righting was increased by OA and OW. At 20 °C, carbohydrate content was reduced significantly by OA. Regardless of temperature, a significant reduction in energy reserves in terms of protein content by OA was found. The ATP provisioning capacity was significantly affected by the interaction between temperature and pCO₂ and was highest at 15 °C and present day pCO₂ levels. The HSP70 levels of crabs exposed to OW were higher than in the control crabs. We conclude that OA and OW might affect the amount and size of prey consumed by this crab. Therefore, by reducing the crab feeding performance these stressors might pose limits on their role in generating microhabitat for other rocky intertidal species inhabiting within mussel beds.

Interactions between different predator-prey states: a method for the derivation of the functional and numerical response

In this paper we introduce a formal method for the derivation of a predator's functional response from a system of fast state transitions of the prey or predator on a time scale during which the total prey and predator densities remain constant. Such derivation permits an explicit interpretation of the structure and parameters of the functional response in terms of individual behaviour. The same method is also used here to derive the corresponding numerical response of the predator as well as of the prey.

A novel metric reveals biotic resistance potential and informs predictions of invasion success

Invasive species continue to proliferate and detrimentally impact ecosystems on a global scale. Whilst impacts are well-documented for many invaders, we lack tools to predict biotic resistance and invasion success. Biotic resistance from communities may be a particularly important determinant of the success of invaders. The present study develops traditional ecological concepts to better understand and quantify biotic resistance. We quantified predation towards the highly invasive Asian tiger mosquito Aedes albopictus and a representative native mosquito Culex pipiens by three native and widespread cyclopoid copepods, using functional response and prey switching experiments. All copepods demonstrated higher magnitude type II functional responses towards the invasive prey over the analogous native prey, aligned with higher attack and maximum feeding rates. All predators exhibited significant, frequency-independent prey preferences for the invader. With these results, we developed a novel metric for biotic resistance which integrates predator numerical response proxies, revealing differential biotic resistance potential among predators. Our results are consistent with field patterns of biotic resistance and invasion success, illustrating the predictive capacity of our methods. We thus propose the further development of traditional ecological concepts, such as functional responses, numerical responses and prey switching, in the evaluation of biotic resistance and invasion success.