Isolation and characterization of 2-butoxyethanol degrading bacterial strains

Biofiltration of toluene and ethyl acetate mixture by a fungal-bacterial biofilter: Performance and community structure analysis

The inhibitory effect of hydrophilic volatile organic compounds (VOCs) on hydrophobic VOCs removal was found to be efficiently reduced by the fungal-bacterial biofilters (F&B-BFs) developed in the present study. Overall, the toluene and ethyl acetate mixture removal efficiencies (REs) and elimination capacities (ECs) of F&B-BFs were superior to those of bacterial biofilters (B-BFs). The REs for toluene and ethyl acetate were 32.5 ± 0.8 % and 74.6 ± 1.0 %, respectively, for F&B-BFs, in comparison to 8.0 ± 0.3 % and 60 ± 1.3 % for B-BFs. The ECs for toluene and ethyl acetate were 13.0 g m-3 h-1 and 149.2 g m-3 h-1, respectively, for the F&B-BF, compared to 3.2 g m-3 h-1 and 119.6 g m-3 h-1 for the B-BFs. This was achieved at a constant empty bed residence time (EBRT) of 45 s. F&B-BFs exhibited a superior mineralization efficiencies (MEs) compared to B-BFs for a VOC mixture of toluene and ethyl acetate (≈36.1 % vs ~ 29.6 %). This is attributed to the direct capture of VOCs by the presence of fungi, increased the contact time between VOCs and VOCs-degrading bacteria, and even distribution of VOCs-degrading bacteria in the F&B-BFs. Moreover, compared with B-BFs, the coupling effect of genus Pseudomonas degradation, and unclassified_f_Herpotrichiellaceae and unclassified_p_Ascomycota adsorption of F&B-BF resulted in a reduction in the impact of the presence of hydrophilic VOCs on the removal of hydrophobic VOCs, thereby enhancing the biofiltration performance of mixtures of hydrophilic and hydrophobic VOCs.

Decolorization potential of malachite green by Ralstonia mannitolilytica isolated from Indonesian cassava-based fermented food tapai

Pollution due to textile dye effluent mishandling is hazardous to ecosystems and to the living beings inhabiting them. This can cause retarded photosynthesis, disrupted fish day/night cycles, unbalanced bacterial populations, and decreased oxygen concentration in contaminated water, leading to low habitability. In this study, we aimed to isolate and characterize the microorganisms found in Indonesian cassava-based fermented food tapai starter cultures as a source of potential microbes for the biological remediation of textile dye pollutants. Microorganisms in the tapai starter culture were screened for their decolorization activity via spread-culture inoculation on a solid growth medium supplemented with textile dyes. Isolated microorganisms were selected based on their ability to secrete textile dye-decolorizing extracellular enzymes via increased light penetration after incubation of the cell-free supernatant (CFS) containing extracellular enzymes in textile dye solutions. Isolate JSP1 was the only bacterium capable of producing malachite green (MG)-decolorizing extracellular enzymes, which enabled it to survive and decolorize MG up to 375 ppm. Moreover, isolate JSP1 CFS was able to optimally decolorize 75% of MG at 100 ppm, but its activity was diminished at concentrations > 350 ppm. Colony and cellular morphology, biochemistry, and 16S rRNA tests revealed that the isolate was of Ralstonia mannitolilytica. Therefore, R. mannitolilytica isolate JSP1 may be a potential bioremediation agent for MG.

Meta-omics elucidates key degraders in a bacterial tris(2-butoxyethyl) phosphate (TBOEP)-degrading enrichment culture

Organophosphate esters (OPEs) are emerging contaminants of growing concern, and there is limited information about the bacterial transformation of OPEs. In this study, we investigated the biotransformation of tris(2-butoxyethyl) phosphate (TBOEP), a frequently detected alkyl-OPE by a bacterial enrichment culture under aerobic conditions. The enrichment culture degraded 5 mg/L TBOEP following the first-order kinetics with a reaction rate constant of 0.314 h^-1. TBOEP was mainly degraded via ether bond cleavage, evidenced by the production of bis(2-butoxyethyl) hydroxyethyl phosphate, 2-butoxyethyl bis(2-hydroxyethyl) phosphate, and 2-butoxyethyl (2-hydroxyethyl) hydrogen phosphate. Other transformation pathways include terminal oxidation of the butoxyethyl group and phosphoester bond hydrolysis. Metagenomic sequencing generated 14 metagenome-assembled genomes (MAGs), showing that the enrichment culture primarily consisted of Gammaproteobacteria, Bacteroidota, Myxococcota, and Actinobacteriota. One MAG assigned to Rhodocuccus ruber strain C1 was the most active in the community, showing upregulation of various monooxygenase, dehydrogenase, and phosphoesterase genes throughout the degradation process, and thus was identified as the key degrader of TBOEP and the metabolites. Another MAG affiliated with Ottowia mainly contributed to TBOEP hydroxylation. Our results provided a comprehensive understanding of the bacterial TBOEP degradation at community level.

Assessment of Bilge Water Degradation by Isolated Citrobacter sp. and Two Indigenous Strains and Identification of Organic Content by GC-MS

Bilge water is oily saline wastewater accumulated on the hull at the bottom of a vessel, generated from leakage from pipes and engines and wash-down freshwater containing cleaning solvents. The present study focused on isolating microorganisms from oil-contaminated sites and indigenous species from raw bilge water and assessment of their ability to biodegrade bilge water. Using phenanthrene as a carbon source Citrobacter species was isolated from oil-contaminated sites and its optimum growth condition was found. The results indicated significant tolerance of the bacterium which presented great biodegradation ability for the tested carbon source. At high salinity (33 g L−1 of NaCl), sufficient phenathrene removal was achieved (81%), whereas variation of pH from 5 to 10 did not affected the survival of the microorganism. Regarding the effect of temperature and nutrients, Citrobacter sp. was better adapted at 30 °C, while lack of nutrients presented a negative impact on its growth. Halomonas and Exiguobacterium sp. were isolated from real bilge water using phenanthrene and phenol as a carbon source. The isolated strains independently exposed to high and low range bilge water pointed out around 83% and 53% chemical oxygen demand (COD) removal, respectively. Analysis of untreated bilge water by gas chromatography-mass spectrometry (GC-MS) was carried out, and the results confirmed the presence of organic compounds having a high similarity with Heptane, N-hexadecanoic acid, Methyl isobutyl Ketone and 1-butoxy-2-propanol. Chromatographic analysis of treated bilge water after exposure to isolated strains indicated the existence of new compounds. These metabolites presented high similarity with N-hexadecanoic, methyl ester, N-hexadecanoic and Octadecanoic acid methyl ester.

Genomic Analysis and Stability Evaluation of the Phenol-Degrading Bacterium Acinetobacter sp. DW-1 During Water Treatment

Phenol is a toxic organic molecule that is widely detected in the natural environment, even in drinking water sources. Biological methods were considered to be a good tool for phenol removal, especially microbial immobilized technology. However, research on the “seed” bacteria along with microbial community analysis in oligotrophic environment such as drinking water system has not been addressed. In this study, Acinetobacter sp. DW-1 with high phenol degradation ability had been isolated from a drinking water biofilter was used as seeded bacteria to treat phenol micro-polluted drinking water source. Meanwhile, the whole genome of strain DW-1 was sequenced using nanopore technology. The genomic analysis suggests that Acinetobacter sp. DW-1 could utilize phenol via the β-ketoadipate pathway, including the catechol and protocatechuate branches. Subsequently, a bio-enhanced polyhedral hollow polypropylene sphere (BEPHPS) filter was constructed to investigate the stability of the seeded bacteria during the water treatment process. The denatured gradient gel electrophoresis (DGGE) profile and the quantification of phenol hydroxylase gene results indicate that when the BEPHPS filter was operated for 56 days, Acinetobacter sp. was still a persistent and competitive bacterium in the treatment group. In addition, 16S rRNA gene amplicon sequencing results indicate that Acinetobacter sp., as well as Pseudomonas sp., Nitrospira sp., Rubrivivax sp. were the predominant bacteria in the treatment group, which were different from that in the CK group. This study provides a better understanding of the mechanisms of phenol degradation by Acinetobacter sp. DW-1 at the gene level, and provides new insights into the stability of seeded bacteria and its effects on microbial ecology during drinking water treatment.

Styrene and Bioaerosol Removal from Waste Air with a Combined Biotrickling Filter and DBD–Plasma System

A combined system of a biotrickling filter and a non-thermal plasma (NTP) in a downstream airflow was operated for 1220 days for treatment of emissions of styrene and secondary emissions of germs formed in the biological process. The biotrickling filter was operated at variable inlet concentrations, empty bed residence times (EBRT), type and dosage of fertilizers, irrigation densities, and starvation periods, while dielectric barrier discharge and corona discharge were operated at different specific input energy levels to achieve optimal conditions. Under these conditions, efficiencies in the removal of volatile organic compounds (VOCs), germs and styrene of 96–98%, 1–4 log units and 24.7–50.1 g C m−3 h−1 were achieved, respectively. Fluid simulations of the NTP and a germ emission-based clocking of the discharge reveal further energy saving potentials of more than 90%. The aim of an energy-efficient elimination of VOCs through a biotrickling filter and of secondary germ emissions by a NTP stage in a downstream airflow for potential re-use of purified waste gas as process gas for industrial application was successfully accomplished.