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For: Cramer RD. Tautomers and topomers: challenging the uncertainties of direct physicochemical modeling. J Comput Aided Mol Des 2010;24:617-20. [DOI: 10.1007/s10822-010-9330-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2010] [Accepted: 03/10/2010] [Indexed: 11/24/2022]
Number Cited by Other Article(s)
1
Thalheim T, Wagner B, Kühne R, Middendorf M, Schüürmann G. A Branch-and-Bound Approach for Tautomer Enumeration. Mol Inform 2015;34:263-75. [DOI: 10.1002/minf.201400128] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2014] [Accepted: 03/04/2015] [Indexed: 11/09/2022]
2
Urbaczek S, Kolodzik A, Rarey M. The Valence State Combination Model: A Generic Framework for Handling Tautomers and Protonation States. J Chem Inf Model 2014;54:756-66. [DOI: 10.1021/ci400724v] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
3
Silver NW, King BM, Nalam MNL, Cao H, Ali A, Kiran Kumar Reddy GS, Rana TM, Schiffer CA, Tidor B. Efficient Computation of Small-Molecule Configurational Binding Entropy and Free Energy Changes by Ensemble Enumeration. J Chem Theory Comput 2013;9:5098-5115. [PMID: 24250277 PMCID: PMC3827837 DOI: 10.1021/ct400383v] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2013] [Indexed: 01/02/2023]
4
Clark RD, Waldman M. Lions and tigers and bears, oh my! Three barriers to progress in computer-aided molecular design. J Comput Aided Mol Des 2011;26:29-34. [PMID: 22160503 PMCID: PMC3268986 DOI: 10.1007/s10822-011-9504-3] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2011] [Accepted: 11/29/2011] [Indexed: 11/28/2022]
5
pK(a) based protonation states and microspecies for protein-ligand docking. J Comput Aided Mol Des 2010;24:935-42. [PMID: 20882397 DOI: 10.1007/s10822-010-9385-x] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2010] [Accepted: 09/16/2010] [Indexed: 10/19/2022]
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