Diffusion Measurements vs. Chemical Shift Titration for Determination of Association Constants on the Example of Camphor–Cyclodextrin Complexes

Investigation of the Complexation between 4-Aminoazobenzene and Cucurbit[7]uril through a Combined Spectroscopic, Nuclear Magnetic Resonance, and Molecular Simulation Studies

Cucurbiturils are well known for their ability to form supramolecular systems with ultrahigh affinities binding. Inclusion complex between 4-aminoazobenzene and cucurbit[7]uril has been investigated in aqueous solution by ultraviolet (UV)-spectroscopy, ¹H NMR, and molecular simulations. 4-aminoazobenzene shows high affinity in acidic solutions while no association was detected in neutral solutions. The thermodynamic properties of complex formation are investigated using both UV spectroscopy and nuclear magnetic resonance (NMR) measurements. Our results highlight that the high binding constant between CB7 and 4AA (log K = 4.9) is the result of a large negative change in Δ_r H° (-19 kJ/mol) and a small positive change in TΔ_r S° (9 kJ/mol). The analysis of the experimental data lead to hypothesis on the structure of the complex. We have used molecular dynamics simulation to interpret experiments. Interestingly, the cis-trans isomerization of aminoazobenzene is considered. All the results are discussed and compared with those previously obtained with other host molecules.

Dramatically Increased Binding Constant of Water-Soluble Cyclodextrin Hyperbranched Polymers: Explored with Diffusion Ordered NMR Spectroscopy (DOSY)

We report that the polymerization of cyclodextrin (CD) with epichlorohydrin (ECH) dramatically increases the binding constant of CD to vanillin, from 55 to 8.4 × 10³ M^-1, by approximately 100 times, as determined by diffusion ordered spectroscopy (DOSY)-¹H NMR. The binding constant increased with an increase of the ECH content of the polymer, although ECH polymers without CDs showed no affinity at all, suggesting that the hydrophobicity of the ECH network outside of CDs helps to enhance the binding. This increased binding constant allows CD-ECH polymers to increase the drug loading ratio, which may be one of the most critical issues for drug delivery systems.

Cyclodextrins Allow the Combination of Incompatible Vancomycin and Ceftazidime into an Ophthalmic Formulation for the Treatment of Bacterial Keratitis

Ceftazidime (CZ) and vancomycin (VA) are two antibiotics used to treat bacterial keratitis. Due to their physical incompatibility (formation of a precipitate), it is not currently possible to associate both molecules in a single container for ophthalmic administration. We firstly characterized the incompatibility then investigated if 2-hydroxypropyl-beta (HPβCD) and 2-hydroxypropyl-gamma cyclodextrins (HPγCD) could prevent this incompatibility. The impact of pH on the precipitation phenomena was investigated by analysing the supernatant solution of the mixture using high performance liquid chromatography. A characterization of the inclusion of CZ with HPγCD using ¹H nuclear magnetic resonance (NMR), and VA with HPβCD using ¹H-NMR and a solubility diagram was performed. A design of experiment was built to determine the optimal conditions to obtain a formulation that had the lowest turbidity and particle count. Our results showed that VA and CZ form an equimolar precipitate below pH 7.3. The best formulation obtained underwent an in-vitro evaluation of its antibacterial activity. The impact of HPCDs on incompatibility has been demonstrated through the inclusion of antibiotics and especially VA. The formulation has been shown to be able to inhibit the incompatibility for pH higher than 7.3 and to possess unaltered antibacterial activity.

Binary Donor-Acceptor Adducts of Tetrathiafulvalene Donors with Cyclic Trimetallic Monovalent Coinage Metal Acceptors

Reactions between the π-acidic cyclic trimetallic coinage metal(I) complexes {[Cu(μ-3,5-(CF₃)₂pz)]₃, {[Ag(μ-3,5-(CF₃)₂pz)]₃, and {[Au(μ-3,5-(CF₃)₂pz)]₃ with TTF, DBTTF and BEDT-TTF give rise to a series of coinage metal(I)-based new binary donor-acceptor adducts {[Cu(μ-3,5-(CF₃)₂pz)]₃DBTTF} (1), {[Ag(μ-3,5-(CF₃)₂pz)]₃DBTTF} (2), {[Au(μ-3,5-(CF₃)₂pz)]₃DBTTF} (3), {[Cu(μ-3,5-(CF₃)₂pz)]₃TTF} (4), {[Ag(μ-3,5-(CF₃)₂pz)]₃TTF} (5), {[Au(μ-3,5-(CF₃)₂pz)]₃TTF} (6), {[Cu(μ-3,5-(CF₃)₂pz)]₃BEDT-TTF} (7), {[Ag(μ-3,5-(CF₃)₂pz)]₃BEDT-TTF} (8), and {[Au(μ-3,5-(CF₃)₂pz)]₃BEDT-TTF} (9), where pz = pyrazolate, TTF = tetrathiafulvalene, DBTTF = dibenzotetrathiafulvalene, and BEDT-TTF = bis(ethylenedithio)tetrathiafulvalene. This series of binary donor-acceptor adducts has been found to exhibit remarkable supramolecular structures in both the solid state and solution, whereby they exhibit supramolecular stacked chains and oligomers, respectively. The supramolecular solid-state and solution binary donor-acceptor adducts also exhibit superior shelf stability under ambient laboratory storage conditions. Structural and other electronic properties of solids and solutions of these adducts have been characterized by single-crystal X-ray diffraction (XRD) structural analysis, ¹H and ¹⁹F NMR, UV-vis-near-IR spectroscopy, Fourier transform infrared, and computational investigations. The combined results of XRD structural data analysis, spectroscopic measurements, and theoretical studies suggest sustenance of the donor-acceptor stacked structure and electronic communication in both the solid state and solution. These properties are discussed in terms of potential applications for this new class of supramolecular binary donor-acceptor adducts in molecular electronic devices, including solar cells, magnetic switching devices, and field-effect transistors.

Analysis of Molecular Interaction of Drugs within β-Cyclodextrin Cavity by Solution-State NMR Relaxation

The prime focus of the present study is to employ NMR relaxation measurement to address the intermolecular interactions, as well as motional dynamics, of drugs, viz., paracetamol and aspirin, encapsulated within the β-cyclodextrin (β-CD) cavity. In this report, we have attempted to demonstrate the applicability of nonselective (R₁^ns), selective (R₁^se), and bi-selective (R₁^bs) spin-lattice relaxation rates to infer dynamical parameters, for example, the molecular rotational correlation times (τ_c) and cross-relaxation rates (σ_ij) of the encapsulated drugs. Molecular rotational correlation times of the free drugs were calculated using the selective relaxation rate in the fast molecular motion time regime (ω_H²τ_c² ≪ 1 and R₁^ns/R₁^se ≈ 1.500), whereas that of the 1:1 complexed drugs were found from the ratio of R₁^ns/R₁^se in the intermediate motion time regime (ω_H²τ_c² ∼ 1 and R₁^ns/R₁^se ≈ 1.054), and these values were compared with each other to confirm the formation of inclusion complexes. Furthermore, the cross-relaxation rates were used to evaluate the intermolecular proton distances. Also, density functional theory calculations were performed to determine the minimum energy geometry of the inclusion complexes and the results compared with those from experiments. The report, thus, presents the possibility of utilizing NMR relaxation data, a more cost-effective experiment, to calculate internuclear distances in the case of drug-supramolecule complexes that are generally obtained by extremely time consuming two-dimensional nuclear Overhauser enhancement-based methods. A plausible mode of insertion of the drug molecules into the β-CD cavity has also been described based on experimental NMR relaxation data analysis.

Evidence of the Disassembly of α-Cyclodextrin-octylamine Inclusion Compounds Conjugated to Gold Nanoparticles via Thermal and Photothermal Effects

Cyclodextrin (CD) molecules form inclusion compounds (ICs), generating dimers that are capable of encapsulating molecules derived from long-chain hydrocarbons. The aim of this study is to evaluate the structural changes experienced by ICs in solution with increasing temperatures. For this, a nuclear magnetic resonance (¹H-NMR) titration was performed to determinate the stoichiometric α-cyclodextrin (α-CD):octylamine (OA) 2:1 and binding constant (k = 2.16 M⁻²) of ICs. Solution samples of α-CD-OA ICs conjugated with gold nanoparticles (AuNPs) were prepared, and ¹H-NMR spectra at different temperatures were recorded. Comparatively, ¹H-NMR spectra of the sample irradiated with a laser with tunable wavelengths, with plasmons of conjugated AuNPs, were recorded. In this work, we present evidence of the disassembly of ICs conjugated with AuNPs. Thermal studies demonstrated that, at 114 °C, there are reversible rearrangements of the host and guests in the ICs in a solid state. Migration movements of the guest molecules from the CD cavity were monitored via temperature-dependent ¹H-NMR, and were verified comparing the chemical shifts of octylamine dissolved in deuterated dimethylsulfoxide (DMSO-d₆) with the OA molecule included in α-CD dissolved in the same solvent. It was observed that, at 117 °C, OA exited the α-CD cavity. CD IC dimer disassembly was also observed when the sample was irradiated with green laser light.

NMR Study on the Inclusion Complexes of β-Cyclodextrin with Isoflavones

The structure of the inclusion complexes of β-cyclodextrin (β-CD) with daidzein and daidzin in D2O were investigated using NMR spectroscopy. For the β-CD and daidzein system, two types of 1:1 complexes were formed with the daidzein deeply inserted into the CD cavity with different orientations. For the β-CD/daidzin system, a 1:1 complex was formed with the flavonoid part of daidzin entering the CD cavity from the wide rim. The inclusion complexes determined by NMR were constructed using molecular docking. Furthermore, the mixture of puerarin, daidzein and daidzin, which are the major isoflavonoid components present in Radix puerariae, was analyzed by diffusion-ordered spectroscopy (DOSY) alone and upon addition of β-CD in order to mimic chromatographic conditions and compare their binding affinities.

Complex formation of fenchone with α-cyclodextrin: NMR titrations

¹³C NMR titration studies of inclusion complexes of bicyclic terpenoid, fenchone enantiomers with α-cyclodextrin revealed their 1:2 guest–host stoichiometry. Sequential binding constants were determined indicating a strong binding cooperativity of two α-cyclodextrin to fenchone. The overall association constants were used to calculate the Gibbs free energies of diastereomeric complex formation, which might be used as a measure of chiral recognition of fenchone by α-cyclodextrin. These results were compared with corresponding data derived for camphor, which is an isomeric bicyclic terpenoid.

The diffusion NMR studies of crown ethers-cyclodextrin complexation process

Formation of complexes between crown ethers and cyclodextrins has been studied using diffusion measurements. The structures of the complexes have been proposed on the basis of the theoretical calculations and the results obtained. Relation between the structural parameters (rings' diameter and symmetry) and the tendency of molecules' interactions are discussed.

Study of the inclusion of the (R)- and (S)-camphor enantiomers in alpha-cyclodextrin by X-ray crystallography and molecular dynamics

The inclusion of (R)- and (S)-camphor compounds in alpha-cyclodextrin has been studied by X-ray crystallography. The crystal structures of the complexes reveal that one guest molecule is accommodated inside the cavity formed by a head-to-head cyclodextrin dimer. In the crystal lattice, the dimers form layers which are successively shifted by half a dimer. In both (R)- and (S)-cases, the camphor molecule exhibits disorder and occupies three major sites with orientations that can be described as either 'polar' or 'equatorial'. Molecular dynamics simulations performed for the observed complexes indicate that although the carbonyl oxygen of both (R)- and (S)-camphor switches between different hydrogen bonding partners, it maintains the observed mode of 'polar' or 'equatorial' alignment.

Synthesis of copper(I) complexes containing enantiopure pybox ligands. First assays on enantioselective synthesis of propargylamines catalyzed by isolated copper(I) complexes

Dinuclear [Cu(2)(R-pybox)(2)][X](2) [X = PF(6), R-pybox = 2,6-bis[4'-(S)-isopropyloxazolin-2'-yl]pyridine (S,S)-(i)Pr-pybox (1), 2,6-bis[4'-(R)-phenyloxazolin-2'-yl]pyridine) (R,R)-Ph-pybox (2), 2,6-bis[4'-(S)-isopropyl-5',5'-difeniloxazolin-2'-yl]pyridine (S,S)-(i)Pr-pybox-diPh (3); X = OTf, (R,R)-Ph-pybox (4)] and mononuclear complexes [Cu(R-pybox)(2)][PF(6)] [R-pybox = (S,S)-(i)Pr-pybox (5), (R,R)-Ph-pybox (6)] have been diastereoselectively prepared by reaction of [Cu(MeCN)(4)][PF(6)] or CuOTf.0.5C(6)H(6) and the corresponding pybox ligand. The reaction of CuX (X = I, Br, Cl) with substituted pybox in a 2:1 molar ratio allows us to synthesize tetranuclear complexes [Cu(4)X(4)(R-pybox}(2)] [R-pybox = (S,S)-(i)Pr-pybox, X = I (7), Br (8); (R,R)-Ph-pybox, X = I (9), Br (10), Cl (11); (S,S)-(i)Pr-pybox-diPh, X = I (12), Cl (13)]. Dinuclear complexes [Cu(2)(mu-Cl)(R-pybox)(2)][CuCl(2)] [R-pybox = (S,S)-(i)Pr-pybox (15), (R,R)-Ph-pybox (16)] have been prepared by reaction of CuCl with (i)Pr-pybox or Ph-pybox in 3:2 molar ratio. The structures of the complexes 1, 2, 7, 15, 16 and that of the polymeric species [Cu(4)(mu(3)-Br)(3)(mu-Br)((i)Pr-pybox)](n) (14) have been determined by single-crystal X-ray diffraction analysis. Diffusion studies using (1)H and (19)F-DOSY experiments provide evidence that the different nuclearity of compounds 1 and 5 is maintained in the solution state and confirm that these ionic compounds exist in solution as stable, discrete, cationic complexes. The complexes 1-4, 6, 9, 10, and 16 as well as the previously reported [Cu(2){(S,S)-(i)Pr-pybox}(2)][OTf](2) have been assayed as catalysts in the enantioselective synthesis of propargylamines. The dinuclear complexes [Cu(2){(R,R)-Ph-pybox}(2)][X](2) (2, 4) were found to be the most efficient catalysts (up to 89% e.e.).

Synthesis and biological evaluation of multivalent carbohydrate ligands obtained by click assembly of pseudo-rotaxanes

Multivalent carbohydrate ligands have been prepared by assembling alpha-cyclodextrin-based pseudo-rotaxanes through "click chemistry". The inclusion complex formed by a lactosyl-alpha-CD conjugate and a decane axle carrying a lactosyl stopper at one extremity and an azido group at the other end was dimerized by bis-propargyl spacers of different lengths to provide oligorotaxanes having adjustable threading ratios. For the first time, saccharidic ligands have been introduced on rotaxanes both as a biological recognition element and as a capping group. The supramolecular species have been isolated and characterized by mass spectrometry as well as by 1D and DOSY NMR experiments. Their ability to inhibit the binding of Arachis hypogaea agglutinin to asialofetuin, assayed by enzyme linked lectin assays (ELLA), was shown to be valency-dependent.

Determination of association constants at moderately fast chemical exchange: complexation of camphor enantiomers by alpha-cyclodextrin

Association constants in weak molecular complexes can be determined by analysis of chemical shifts variations resulting from changes of guest to host concentration ratio. In the regime of very fast exchange, i.e., when exchange rate is several orders of magnitude larger than the Larmor angular frequency difference of the observed resonance in free and complexed molecule, the apparent position of averaged resonance is a population-weighted mean of resonances of particular forms involved in the equilibrium. The assumption of very fast exchange is often, however, tacitly admitted in literature even in cases where the process of interest is much slower than required. We show that such an unjustified simplification may, under certain circumstances, lead to significant underestimation of association constant and, in consequence, to non-negligible errors in Gibbs free energy under determination. We present a general method, based on iterative numerical NMR line shape analysis, which allows one for the compensation of chemical exchange effects, and delivers both the correct association constants and the exchange rates. The latter are not delivered by the other mentioned method. Practical application of our algorithm is illustrated by the case of camphor-alpha-cyclodextrin complexes.