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Shahabadi N, Shiri F, Hadidi S, Farshadfar K, Darbemamieh M, Mark Roe S. The role of both intercalation and groove binding at AT-rich DNA regions in the interaction process of a dinuclear Cu(I) complex probed by spectroscopic and simulation analysis. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2021.116290] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Santolaya J, Busto N, Martínez-Alonso M, Espino G, Grunenberg J, Barone G, García B. Experimental and theoretical characterization of the strong effects on DNA stability caused by half-sandwich Ru(II) and Ir(III) bearing thiabendazole complexes. J Biol Inorg Chem 2020; 25:1067-1083. [PMID: 32951085 DOI: 10.1007/s00775-020-01823-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Accepted: 08/31/2020] [Indexed: 12/28/2022]
Abstract
The synthesis and characterization of two half-sandwich complexes of Ru(II) and Ir(III) with thiabendazole as ancillary ligand and their DNA binding ability were investigated using experimental and computational methods. 1H NMR and acid-base studies have shown that aquo-complexes are the reactive species. Kinetic studies show that both complexes bind covalently to DNA through the metal site and non covalently through the ancillary ligand. Thermal stability studies, viscosity, circular dichroism measurements and quantum chemical calculations have shown that the covalent binding causes breaking of the H-bonding between base pairs, bringing about DNA denaturation and compaction. Additionally, molecular dynamics (MD) simulations and quantum mechanics/molecular mechanics (QM/MM) calculations shed light into the binding features of the Ru(II) and Ir(III) complexes and their respective enantiomers toward double-helical DNA, highlighting the important role played by the NˆN ancillary ligand once the complexes are covalently linked to DNA. Moreover, metal quantification in the nucleus of SW480 colon adenocarcinoma cells were carried out by inductively coupled plasma-mass spectrometry (ICP-MS), both complexes are more internalized than cisplatin after 4 h of exposition. However, in spite of the dramatic changes in the helicity of the DNA secondary structure induced by these complexes and their nuclear localization, antiproliferative studies have revealed that both, Ru(II) and Ir(III) complexes, cannot be considered cytotoxic. This unexpected behavior can be justified by the fast formation of aquo-complexes, which may react with components of the cell culture medium or the cytoplasm compartment in such a way that they may become deactivated before reaching DNA.
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Affiliation(s)
- Javier Santolaya
- Chemistry Department, University of Burgos, Pza. Misael Bañuelos s/n, 09001, Burgos, Spain.,Department of Biological, Chemical and Pharmaceutical Sciences and Technologies, University of Palermo, viale delle Scienze, Ed. 17, 90128, Palermo, Italy
| | - Natalia Busto
- Chemistry Department, University of Burgos, Pza. Misael Bañuelos s/n, 09001, Burgos, Spain.
| | - Marta Martínez-Alonso
- Chemistry Department, University of Burgos, Pza. Misael Bañuelos s/n, 09001, Burgos, Spain.,Laboratory for Inorganic Chemical Biology, Institute of Chemistry for Life and Health Sciences, Chimie ParisTech, PSL University, CNRS, 75005, Paris, France
| | - Gustavo Espino
- Chemistry Department, University of Burgos, Pza. Misael Bañuelos s/n, 09001, Burgos, Spain
| | - Jörg Grunenberg
- Institut für Organische Chemie, Technische Universität Braunschweig, Hagenring 30, 38106, Braunschweig, Germany
| | - Giampaolo Barone
- Department of Biological, Chemical and Pharmaceutical Sciences and Technologies, University of Palermo, viale delle Scienze, Ed. 17, 90128, Palermo, Italy
| | - Begoña García
- Chemistry Department, University of Burgos, Pza. Misael Bañuelos s/n, 09001, Burgos, Spain
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Takroni KM, Farghaly TA, Harras MF, El‐Ghamry HA. Synthesis, structure elucidation, DNA binding and molecular docking studies of novel copper(II) complexes of two 1,3,4‐thiadiazolethiosemicarbazone derivatives. Appl Organomet Chem 2020. [DOI: 10.1002/aoc.5860] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Khadiga M. Takroni
- Chemistry Department, Faculty of Applied Science Umm Al–Qura University Makkah Saudi Arabia
| | | | - Marwa F. Harras
- Pharmaceutical Chemistry Department, Faculty of Pharmacy Al‐Azhar University Cairo Egypt
| | - Hoda A. El‐Ghamry
- Chemistry Department, Faculty of Applied Science Umm Al–Qura University Makkah Saudi Arabia
- Chemistry Department, Faculty of Science Tanta University Tanta Egypt
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Bipyrazole Based Novel Bimetallic µ-oxo Bridged Au(III) Complexes as Potent DNA Interacalative, Genotoxic, Anticancer, Antibacterial and Cytotoxic Agents. J Inorg Organomet Polym Mater 2020. [DOI: 10.1007/s10904-020-01618-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
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Varma RR, Pursuwani BH, Suresh E, Bhatt BS, Patel MN. Single crystal, DNA interaction and cytotoxicity studies of rhenium(I) organometallic compounds. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127068] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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Pandya SB, Patel UH, Chaudhary KP, Socha BN, Patel NJ, Bhatt BS. DNA interaction, cytotoxicity and molecular structure of cobalt complex of 4‐amino‐N‐(6‐chloropyridazin‐3‐yl)benzene sulfonamide in the presence of secondary ligand pyridine. Appl Organomet Chem 2019. [DOI: 10.1002/aoc.5235] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Sachin B. Pandya
- X‐ray Laboratory, Department of PhysicsSardar Patel University Vallabh Vidyanagar 388120 Gujarat India
| | - Urmila H. Patel
- X‐ray Laboratory, Department of PhysicsSardar Patel University Vallabh Vidyanagar 388120 Gujarat India
| | - Kaushik P. Chaudhary
- X‐ray Laboratory, Department of PhysicsSardar Patel University Vallabh Vidyanagar 388120 Gujarat India
| | - Bhavesh N. Socha
- X‐ray Laboratory, Department of PhysicsSardar Patel University Vallabh Vidyanagar 388120 Gujarat India
| | - Nikita J. Patel
- Department of ChemistrySardar Patel University Vallabh Vidyanagar 388120 Gujarat India
| | - Bhupesh S. Bhatt
- Department of ChemistrySardar Patel University Vallabh Vidyanagar 388120 Gujarat India
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Vekariya PA, Karia PS, Bhatt BS, Patel MN. Spectroscopic and electrochemical study for evaluating DNA interaction activity of 4‐(3‐halophenyl)‐6‐(pyridin‐2‐yl)pyrimidin‐2‐amine based piano stool Cp* Rh (III) and Ir (III) complexes. Appl Organomet Chem 2019. [DOI: 10.1002/aoc.5152] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
| | - Parag S. Karia
- Department of ChemistrySardar Patel University Vallabh Vidyanagar 388 120 Gujarat India
| | - Bhupesh S. Bhatt
- Department of ChemistrySardar Patel University Vallabh Vidyanagar 388 120 Gujarat India
| | - Mohan N. Patel
- Department of ChemistrySardar Patel University Vallabh Vidyanagar 388 120 Gujarat India
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Kanthecha DA, Bhatt BS, Patel MN. Synthesis, characterization and biological activities of imidazo[1,2-a]pyridine based gold(III) metal complexes. Heliyon 2019; 5:e01968. [PMID: 31294115 PMCID: PMC6595245 DOI: 10.1016/j.heliyon.2019.e01968] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2018] [Revised: 05/07/2019] [Accepted: 06/14/2019] [Indexed: 12/16/2022] Open
Abstract
Five imidazo [1,2-a]pyridine derivatives and their Au(III) complexes were synthesized. The compounds were characterized by 1H-NMR, 13C-NMR, IR, mass, UV-visible, elemental analysis, conductivity and magnetic measurement studies. All the compounds were screened for diverse biological activities to check the effect of coordination of Au(III) with imidazo [1,2-a]pyridine heterocycles. The DNA interaction ability of compounds were studied as the change in absorption maxima and position of HS-DNA in presence of compounds and viscosity measurement due to change in DNA length under the influence of compounds. The computational insight of compound-DNA interaction was taken in docking study. All the results suggest intercalation mode of binding. The cellular level cytotoxic nature of compounds was evaluated using trypan blue dye staining of dead cell in cell viability assay. The smearing of DNA was observed, while DNA extracted from S. pombe cells in presence of complexes was subjected to gel electrophoresis, which shows their toxic effect on DNA. The complexes were evaluated for cytotoxicity on human A549 (Lung adenocarcinoma) cell line by MTT assay (IC50 values). The in vitro cytotoxicity in terms of LC50 value was checked on a simple zoological organism, brine shrimp.
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Affiliation(s)
- Darshana A Kanthecha
- Department of Chemistry, Sardar Patel University, Vallabh Vidyanagar, 388 120, Gujarat, India
| | - Bhupesh S Bhatt
- Department of Chemistry, Sardar Patel University, Vallabh Vidyanagar, 388 120, Gujarat, India
| | - Mohan N Patel
- Department of Chemistry, Sardar Patel University, Vallabh Vidyanagar, 388 120, Gujarat, India
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Thakor KP, Lunagariya MV, Bhatt BS, Patel MN. Fluorescence and Absorption Titrations of Bio-relevant Imidazole Based Organometallic Pd(II) Complexes with DNA: Synthesis, Characterization, DNA Interaction, Antimicrobial, Cytotoxic and Molecular Docking Studies. J Inorg Organomet Polym Mater 2019. [DOI: 10.1007/s10904-019-01184-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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