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Guetari R, Ayari H, Sakly H. Computer-aided diagnosis systems: a comparative study of classical machine learning versus deep learning-based approaches. Knowl Inf Syst 2023; 65:1-41. [PMID: 37361377 PMCID: PMC10205571 DOI: 10.1007/s10115-023-01894-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Revised: 04/23/2023] [Accepted: 04/25/2023] [Indexed: 06/28/2023]
Abstract
The diagnostic phase of the treatment process is essential for patient guidance and follow-up. The accuracy and effectiveness of this phase can determine the life or death of a patient. For the same symptoms, different doctors may come up with different diagnoses whose treatments may, instead of curing a patient, be fatal. Machine learning (ML) brings new solutions to healthcare professionals to save time and optimize the appropriate diagnosis. ML is a data analysis method that automates the creation of analytical models and promotes predictive data. There are several ML models and algorithms that rely on features extracted from, for example, a patient's medical images to indicate whether a tumor is benign or malignant. The models differ in the way they operate and the method used to extract the discriminative features of the tumor. In this article, we review different ML models for tumor classification and COVID-19 infection to evaluate the different works. The computer-aided diagnosis (CAD) systems, which we referred to as classical, are based on accurate feature identification, usually performed manually or with other ML techniques that are not involved in classification. The deep learning-based CAD systems automatically perform the identification and extraction of discriminative features. The results show that the two types of DAC have quite close performances but the use of one or the other type depends on the datasets. Indeed, manual feature extraction is necessary when the size of the dataset is small; otherwise, deep learning is used.
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Affiliation(s)
- Ramzi Guetari
- SERCOM Laboratory, Polytechnic School of Tunisia, University of Carthage, PO Box 743, La Marsa, 2078 Tunisia
| | - Helmi Ayari
- SERCOM Laboratory, Polytechnic School of Tunisia, University of Carthage, PO Box 743, La Marsa, 2078 Tunisia
| | - Houneida Sakly
- RIADI Laboratory, National School of Computer Sciences, University of Manouba, Manouba, 2010 Tunisia
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Mo X, Chen W, Chen S, Chen Z, Guo Y, Chen Y, Wu X, Zhang L, Chen Q, Jin Z, Li M, Chen L, You J, Xiong Z, Zhang B, Zhang S. MRI texture-based machine learning models for the evaluation of renal function on different segmentations: a proof-of-concept study. Insights Imaging 2023; 14:28. [PMID: 36746892 PMCID: PMC9902579 DOI: 10.1186/s13244-023-01370-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Accepted: 01/03/2023] [Indexed: 02/08/2023] Open
Abstract
BACKGROUND To develop and validate an MRI texture-based machine learning model for the noninvasive assessment of renal function. METHODS A retrospective study of 174 diabetic patients (training cohort, n = 123; validation cohort, n = 51) who underwent renal MRI scans was included. They were assigned to normal function (n = 71), mild or moderate impairment (n = 69), and severe impairment groups (n = 34) according to renal function. Four methods of kidney segmentation on T2-weighted images (T2WI) were compared, including regions of interest covering all coronal slices (All-K), the largest coronal slices (LC-K), and subregions of the largest coronal slices (TLCO-K and PIZZA-K). The speeded-up robust features (SURF) and support vector machine (SVM) algorithms were used for texture feature extraction and model construction, respectively. Receiver operating characteristic (ROC) curve analysis was used to evaluate the diagnostic performance of models. RESULTS The models based on LC-K and All-K achieved the nonsignificantly highest accuracy in the classification of renal function (all p values > 0.05). The optimal model yielded high performance in classifying the normal function, mild or moderate impairment, and severe impairment, with an area under the curve of 0.938 (95% confidence interval [CI] 0.935-0.940), 0.919 (95%CI 0.916-0.922), and 0.959 (95%CI 0.956-0.962) in the training cohorts, respectively, as well as 0.802 (95%CI 0.800-0.807), 0.852 (95%CI 0.846-0.857), and 0.863 (95%CI 0.857-0.887) in the validation cohorts, respectively. CONCLUSION We developed and internally validated an MRI-based machine-learning model that can accurately evaluate renal function. Once externally validated, this model has the potential to facilitate the monitoring of patients with impaired renal function.
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Affiliation(s)
- Xiaokai Mo
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Wenbo Chen
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China ,grid.470066.3Department of Radiology, Huizhou Municipal Central Hospital, No. 41 Eling Bei Road, Huizhou, 516001 Guangdong People’s Republic of China
| | - Simin Chen
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Zhuozhi Chen
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Yuanshu Guo
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Yulian Chen
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Xuewei Wu
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Lu Zhang
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Qiuying Chen
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Zhe Jin
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Minmin Li
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Luyan Chen
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Jingjing You
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Zhiyuan Xiong
- grid.412601.00000 0004 1760 3828Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627 Guangdong People’s Republic of China
| | - Bin Zhang
- Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627, Guangdong, People's Republic of China.
| | - Shuixing Zhang
- Department of Radiology, The First Affiliated Hospital of Jinan University, No. 613, Huangpu West Road, Tianhe District, Guangzhou, 510627, Guangdong, People's Republic of China.
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Tang X, Yang Y, Huang L, Qiu L. The Application of Texture Feature Analysis of Rectus Femoris Based on Local Binary Pattern (LBP) Combined With Gray-Level Co-Occurrence Matrix (GLCM) in Sarcopenia. JOURNAL OF ULTRASOUND IN MEDICINE 2021; 41:2169-2179. [PMID: 34825723 DOI: 10.1002/jum.15896] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Revised: 11/01/2021] [Accepted: 11/11/2021] [Indexed: 02/05/2023]
Abstract
OBJECTIVES In order to detect the changes in muscle texture of sarcopenia and to explore a new method of ultrasound assessment of muscle changes in sarcopenia. METHODS we used the local binary pattern (LBP) combined with gray-level co-occurrence matrix (GLCM) method to extract and quantitatively analyze the texture information of the rectus femoris of different people, and initially verified the robustness of this method to image gain changes. We recruited young volunteers, elderly volunteers without sarcopenia, and elderly volunteers with sarcopenia in this cross-sectional study. We scanned the rectus femoris and extracted their muscle texture features. RESULTS We found that when ultrasonographic gain varied from 40% to 70%, the intraclass correlation coefficient (ICC) of contrast, entropy, and homogeneity were 0.989, 0.973, and 0.989, respectively. Body mass index was significantly related to contrast (r = 0.285, P < .05), and age had a significant correlation with contrast and homogeneity (r = -0.259 and r = 0.269, P < .05). The elderly volunteers with sarcopenia had the highest entropy (0.363 [0.342-0.403]) and homogeneity (2.203 [2.162-2.277]) in the texture of the rectus femoris among the three groups, and at the same time had the lowest contrast (44.583 [43.492-47.399]), and all P < .05. CONCLUSION LBP combined with GLCM can be a stable method for extracting muscle texture features. At the same time, the contrast, entropy, and homogeneity of the rectus femoris of the elderly with sarcopenia were significantly different from those of the young volunteers and the elderly without sarcopenia, suggesting the texture features of rectus femoris are potential parameters for evaluating muscle function and pathological changes.
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Affiliation(s)
- Xinyi Tang
- Department of Medical Ultrasound, West China Hospital of Sichuan University, Chengdu, China
| | - Yujia Yang
- Department of Medical Ultrasound, West China Hospital of Sichuan University, Chengdu, China
| | - Li Huang
- National Clinical Research Center for Geriatrics, West China Hospital, Sichuan University, Chengdu, China
| | - Li Qiu
- Department of Medical Ultrasound, West China Hospital of Sichuan University, Chengdu, China
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