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Tatsis VA
, Tsoulos IG, Stavrakoudis A.
Molecular Dynamics Simulations of the TSSPSAD Peptide Antigen in Free and Bound with CAMPATH-1H Fab Antibody States: The Importance of the β-Turn Conformation.
Int J Pept Res Ther
2009;
15
:1-9. [DOI:
10.1007/s10989-008-9155-y
]
[
Citation(s) in
RCA
: 6
]
[
Impact Index Per Article: 0.4
]
[
Reference Citation Analysis
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[Indexed: 10/21/2022]
Number
Cited by Other Article(s)
1
Shukla RT
, Sasidhar YU. Conformational dynamics of a short antigenic peptide in its free and antibody bound forms gives insight into the role of β-turns in peptide immunogenicity.
Proteins
2015;
83
:1352-67. [DOI:
10.1002/prot.24831
]
[
Citation(s) in
RCA
: 4
]
[
Impact Index Per Article: 0.4
]
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[Received: 07/24/2014]
[Revised: 04/21/2015]
[Accepted: 05/02/2015]
[Indexed: 02/02/2023]
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Affiliation(s)
Rashmi Tambe Shukla
Department of Chemistry; Indian Institute of Technology Bombay; Powai Mumbai 400076 India
Yellamraju U. Sasidhar
Department of Chemistry; Indian Institute of Technology Bombay; Powai Mumbai 400076 India
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2
Insights into the structure of the LC13 TCR/HLA-B8-EBV peptide complex with molecular dynamics simulations.
Cell Biochem Biophys
2011;
60
:283-95. [DOI:
10.1007/s12013-011-9151-2
]
[
Citation(s) in
RCA
: 11
]
[
Impact Index Per Article: 0.8
]
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[Indexed: 12/11/2022]
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3
Stavrakoudis A
. Cis-transisomerization of the Epstein-Barr virus determinant peptide EENLLDFVRF after the DM1 TCR recognition of the HLA-B*4405/peptide complex.
FEBS Lett
2010;
585
:485-91. [DOI:
10.1016/j.febslet.2010.12.013
]
[
Citation(s) in
RCA
: 7
]
[
Impact Index Per Article: 0.5
]
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[Received: 08/18/2010]
[Revised: 11/23/2010]
[Accepted: 12/08/2010]
[Indexed: 10/18/2022]
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4
Homology modeling and molecular dynamics simulations of MUC1-9/H-2Kb complex suggest novel binding interactions.
J Mol Model
2010;
17
:1817-29. [DOI:
10.1007/s00894-010-0884-4
]
[
Citation(s) in
RCA
: 3
]
[
Impact Index Per Article: 0.2
]
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[Received: 06/29/2010]
[Accepted: 10/19/2010]
[Indexed: 11/26/2022]
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5
Stavrakoudis A
. Computational modelling and molecular dynamics simulations of a cyclic peptide mimotope of the CD52 antigen complexed with CAMPATH-1H antibody.
MOLECULAR SIMULATION
2010. [DOI:
10.1080/08927020903124593
]
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Citation(s) in
RCA
: 6
]
[
Impact Index Per Article: 0.4
]
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[Indexed: 10/20/2022]
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