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Mohanty AK, Choudhary S, Kaushik JK, Fisher AJ. Crystal structure of breast regression protein 39 (BRP39), a signaling glycoprotein expressed during mammary gland apoptosis, at 2.6 Å resolution. J Struct Biol 2021; 213:107737. [PMID: 33838225 DOI: 10.1016/j.jsb.2021.107737] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2021] [Revised: 04/01/2021] [Accepted: 04/02/2021] [Indexed: 11/16/2022]
Abstract
Breast regression protein 39 (BRP39) is a 39 kDa protein that is a member of chitolectin class of glycosyl hydrolase family 18 (GH18). High expression levels of BRP39 have been detected in breast carcinoma. It helps in proliferation of cells during the progression of this disease and may act as a signaling factor. BRP39 may act as a potential candidate for rational structure-based drug design against breast carcinoma. In this study, we report the crystal structure of mouse recombinant BRP39 expressed in E. coli. The structure was solved by molecular replacement and refined to 2.6 Å resolution. The overall structure of BRP39 consisted of two globular domains: a large (β/α)8 triosephosphate isomerase (TIM) barrel domain and a small (α + β) domain. Three non-proline cis-peptides were detected in the sugar-binding cleft of BRP39, including Ser57-Phe58, Leu141-Tyr142, and Trp353-Ala354. The latter residues were conserved in other GH18 family members. It was notable that the conformation of critical Trp100 residue within the sugar-binding cleft was oriented away from the barrel. The side-chain conformation was found to be similar to that observed in chitinases, however, it was oriented into the barrel in other chitinase-like proteins (CLPs). The conformation of this critical residue may have significant implications in sugar binding. Further, two amino acid substitutions were observed in the sugar-binding groove of BRP39. The conserved Asn100 and Arg263 in Hcgp39 and other CLPs proteins (SPX-40 structures) were substituted by Lys101 and Lys264 in BRP39 which may have a significant impact on the sugar-binding properties.
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Affiliation(s)
- Ashok K Mohanty
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal 132001, Haryana, India.
| | - Suman Choudhary
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal 132001, Haryana, India
| | - Jai K Kaushik
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal 132001, Haryana, India
| | - Andrew J Fisher
- Department of Chemistry, University of California Davis, Davis, CA 95616, United States; Department of Molecular and Cellular Biology, University of California Davis, Davis, CA 95616, United States
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Choudhary S, Janjanam J, Kumar S, Kaushik J, Mohanty A. Structural and functional characterization of buffalo oviduct-specific glycoprotein (OVGP1) expressed during estrous cycle. Biosci Rep 2019; 39:BSR20191501. [PMID: 31763672 PMCID: PMC6904773 DOI: 10.1042/bsr20191501] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Revised: 11/05/2019] [Accepted: 11/15/2019] [Indexed: 01/10/2023] Open
Abstract
Oviduct-specific glycoprotein (OVGP1) is a high molecular weight chitinase-like protein belonging to GH18 family. It is secreted by non-ciliated epithelial cells of oviduct during estrous cycle providing an essential milieu for fertilization and embryo development. The present study reports the characterization of buffalo OVGP1 through structural modeling, carbohydrate-binding properties and evolutionary analysis. Structural model displayed the typical fold of GH18 family members till the boundary of chitinase-like domain further consisting of a large (β/α)8 TIM barrel sub-domain and a small (α+β) sub-domain. Two critical catalytic residues were found substituted in the catalytic centre (Asp to Phe118, Glu to Leu120) compared with the active chitinase. The carbohydrate-binding groove in TIM barrel was lined with various conserved aromatic residues. Molecular docking with different sugars revealed the involvement of various residues in hydrogen-bonding and non-bonded contacts. Most of the substrate-binding residues were conserved except for a few replacements (Ser13, Lys48, Asp49, Pro50, Asp167, Glu199, Gln272 and Phe275) in comparison with other GH18 members. The residues Trp10, Trp79, Asn80, Gln272, Phe275 and Trp334 were involved in recognition of all six ligands. The α+β sub-domain participated in sugar-binding through Thr270, Gln272, Tyr242 and Phe275. The binding assays revealed significant sugar-binding with purified native and recombinant OVGP1. Phylogenetic analysis revealed that OVGP1 was closely related to AMCases followed by other CLPs and evolution of OVGP1 occurred through several gene duplications. This is the first study describing the structural characteristics of OVGP1 that will further help to understand its interaction with gametes to perform crucial reproductive functions.
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Affiliation(s)
- Suman Choudhary
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal 132001, Haryana, India
| | - Jagadeesh Janjanam
- Department of Developmental Neurobiology, St. Jude Children’s Research Hospital, Memphis, TN 38105, U.S.A
| | - Sudarshan Kumar
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal 132001, Haryana, India
| | - Jai K. Kaushik
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal 132001, Haryana, India
| | - Ashok K. Mohanty
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal 132001, Haryana, India
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Singh S, Choudhary S, Anand V, Jaswal S, Verma AK, Kumar S, Kaushik JK, Mohanty AK. New insights into the catalytic inactivity of mammary gland protein-40, a chitinase-like protein expressed during mammary gland involution. Mol Biol Rep 2019; 46:2243-2257. [DOI: 10.1007/s11033-019-04679-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2018] [Accepted: 02/07/2019] [Indexed: 10/27/2022]
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Choudhary S, Kumaresan A, Kumar M, Chhillar S, Malik H, Kumar S, Kaushik JK, Datta TK, Mohanty AK. Effect of recombinant and native buffalo OVGP1 on sperm functions and in vitro embryo development: a comparative study. J Anim Sci Biotechnol 2017; 8:69. [PMID: 28883914 PMCID: PMC5580196 DOI: 10.1186/s40104-017-0201-5] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2017] [Accepted: 08/01/2017] [Indexed: 11/25/2022] Open
Abstract
Background An oviduct- specific glycoprotein, OVGP1, is synthesized and secreted by non-ciliated epithelial cells of the mammalian oviduct which provides an essential milieu for reproductive functions. The present study reports the effects of recombinant buffalo OVGP1 that lacks post-translational modifications, and native Buffalo OVGP1 isolated from oviductal tissue, on frozen- thawed sperm functions and in vitro embryo development. Results The proportion of viable sperms was greater (P < 0.05) in the recombinant OVGP1-treated group compared to the native OVGP1-treated group at 2 h, 3 h, and 4 h of incubation. The proportion of motile sperms at 3 h and 4 h of incubation; and membrane- intact sperms at 4 h was greater (P < 0.05) in the native OVGP1-treated group compared to the control and recombinant OVGP1-treated groups. The proportion of capacitated and acrosome- reacted sperms was greater (P < 0.05) in the native OVGP1-treated group compared to the recombinant OVGP1 group at 4 h. The rates of cleavage of embryos and their development to the blastocyst stage were greater (P < 0.05) in the presence of either native or recombinant OVGP1 in comparison to control at 10 μg/mL concentration as compared to 5 or 20 μg/mL. Conclusions The study suggests that both native and recombinant OVGP1 impart a positive effect on various sperm features and in vitro embryo development. However, native OVGP1 was found to have a more pronounced effect in comparison to recombinant non-glycosylated OVGP1 on various sperm functions except viability. Hence, our current findings infer that glycosylation of OVGP1 might be essential in sustaining the sperm functions but not the in vitro embryo development. Electronic supplementary material The online version of this article (doi:10.1186/s40104-017-0201-5) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Suman Choudhary
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal, Haryana 132001 India
| | - A Kumaresan
- Livestock and Production Management Section, National Dairy Research Institute, Karnal, Haryana 132001 India
| | - Manish Kumar
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal, Haryana 132001 India
| | - Shivani Chhillar
- Livestock and Production Management Section, National Dairy Research Institute, Karnal, Haryana 132001 India
| | - Hrudananda Malik
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal, Haryana 132001 India
| | - Sudarshan Kumar
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal, Haryana 132001 India
| | - Jai K Kaushik
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal, Haryana 132001 India
| | - Tirtha K Datta
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal, Haryana 132001 India
| | - Ashok K Mohanty
- Animal Biotechnology Centre, National Dairy Research Institute, Karnal, Haryana 132001 India
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Kawamoto T, Amorim L, Oliveira L, Shiomi H, Costa E, Guimarães J. Adição da proteína específica do oviduto de porcas (pOSP) e da melatonina em meios de maturação e o efeito na clivagem in vitro de embriões suínos. ARQ BRAS MED VET ZOO 2016. [DOI: 10.1590/1678-4162-8597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
RESUMO No presente estudo, utilizou-se a melatonina e a proteína específica do oviduto (pOSP) nos meios de maturação in vitro. Foram avaliadas a expansão do complexo cumulus-ovócito (CCOs), as concentrações intracelulares de espécies reativas de oxigênio (ROS) e o desenvolvimento embrionário nos diferentes grupos (C = controle; T1 = somente com melatonina; T2 = com melatonina e pOSP e T3 somente com pOSP). No tocante à expansão do CCOs, houve diferença (P<0,05) dos valores obtidos no grupo C em relação aos valores médios dos grupos T1, T2 e T3, porém não houve diferença entre os valores obtidos nos tratamentos (P>0,05). Na dosagem de ROS, não houve diferença entre os valores médios obtidos no grupo C (26,4±10,9) e o valor verificado no grupo T1 (23,4±7,8), porém no grupo T2 (21,3±9,7) o valor médio mostrou-se satisfatório em relação ao valor do grupo C. No entanto, o valor médio do grupo T3 (16,6±10,5) foi o que demonstrou resultado mais satisfatório quando comparado aos demais grupos (P<0,05). A produção de embriões foi avaliada por meio da taxa de clivagem. Não houve diferença (P>0,05) entre os valores obtidos entre o grupo C (48,9 %) e os valores verificados nos grupos T1 (51,5 %), T2 (50 %), T3 (57,7 %), nem destes entre si. Este estudo permitiu concluir que a proteína específica do oviduto recombinante e a melatonina foram eficientes em melhorar a expansão dos CCOs. Além disso, as células tratadas com pOSP mostraram-se com menor quantidade de ROS, podendo a pOSP ser considerada um antioxidante proteico.
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Janjanam J, Singh S, Jena MK, Varshney N, Kola S, Kumar S, Kaushik JK, Grover S, Dang AK, Mukesh M, Prakash BS, Mohanty AK. Comparative 2D-DIGE proteomic analysis of bovine mammary epithelial cells during lactation reveals protein signatures for lactation persistency and milk yield. PLoS One 2014; 9:e102515. [PMID: 25111801 PMCID: PMC4128602 DOI: 10.1371/journal.pone.0102515] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2014] [Accepted: 06/20/2014] [Indexed: 12/21/2022] Open
Abstract
Mammary gland is made up of a branching network of ducts that end with alveoli which surrounds the lumen. These alveolar mammary epithelial cells (MEC) reflect the milk producing ability of farm animals. In this study, we have used 2D-DIGE and mass spectrometry to identify the protein changes in MEC during immediate early, peak and late stages of lactation and also compared differentially expressed proteins in MEC isolated from milk of high and low milk producing cows. We have identified 41 differentially expressed proteins during lactation stages and 22 proteins in high and low milk yielding cows. Bioinformatics analysis showed that a majority of the differentially expressed proteins are associated in metabolic process, catalytic and binding activity. The differentially expressed proteins were mapped to the available biological pathways and networks involved in lactation. The proteins up-regulated during late stage of lactation are associated with NF-κB stress induced signaling pathways and whereas Akt, PI3K and p38/MAPK signaling pathways are associated with high milk production mediated through insulin hormone signaling.
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Affiliation(s)
- Jagadeesh Janjanam
- Animal Biotechnology Center, National Dairy Research Institute, Karnal, India
- * E-mail: (JJ); (AKM)
| | - Surender Singh
- Animal Biotechnology Center, National Dairy Research Institute, Karnal, India
| | - Manoj K. Jena
- Animal Biotechnology Center, National Dairy Research Institute, Karnal, India
| | - Nishant Varshney
- Animal Biotechnology Center, National Dairy Research Institute, Karnal, India
| | - Srujana Kola
- Department of Biophysics, All India Institute of Medical Sciences, New Delhi, India
| | - Sudarshan Kumar
- Animal Biotechnology Center, National Dairy Research Institute, Karnal, India
| | - Jai K. Kaushik
- Animal Biotechnology Center, National Dairy Research Institute, Karnal, India
| | - Sunita Grover
- Animal Biotechnology Center, National Dairy Research Institute, Karnal, India
| | - Ajay K. Dang
- Dairy Cattle Physiology Division, National Dairy Research Institute, Karnal, India
| | - Manishi Mukesh
- National Bureau of Animal Genetic Resources, Karnal, India
| | - B. S. Prakash
- Dairy Cattle Physiology Division, National Dairy Research Institute, Karnal, India
| | - Ashok K. Mohanty
- Animal Biotechnology Center, National Dairy Research Institute, Karnal, India
- * E-mail: (JJ); (AKM)
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Hribal R, Hachen A, Jewgenow K, Zahmel J, Fernandez-Gonzalez L, Braun BC. The influence of recombinant feline oviductin on different aspects of domestic cat (Felis catus) IVF and embryo quality. Theriogenology 2014; 82:742-9. [PMID: 25023298 DOI: 10.1016/j.theriogenology.2014.06.009] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2014] [Revised: 05/21/2014] [Accepted: 06/05/2014] [Indexed: 11/25/2022]
Abstract
Oviductin is known to be a key player providing a convenient environment for the process of fertilization affecting this by direct interaction with oocytes and sperm. As in vitro embryo production in the context of assisted reproduction for endangered felids is still in the process of optimization, oviductin might be used to improve IVF results. Recombinant His-tagged feline oviductin was expressed by transformed Escherichia coli BL21DE3 cells. The protein was purified by immobilized metal ion affinity chromatography. The effect of the recombinant protein was characterized in three experiments: a hemizona assay for sperm binding analysis, the IVF outcome, and the relative mRNA expression levels in blastocysts after IVF. A significant higher number of bound sperm cells were found after incubation in oviductin. No significant effect on cleavage, morula, and blastocyst rates with or without oviductin incubation during IVF could be observed. However, the relative mRNA abundance of GJA1, a gene, whose expression level is known to be a marker of embryo quality, was significantly increased (P value less than 0.05) in blastocysts after oviductin treatment. In contrast to this, expression of OCT4, HSP70, DNMT1, DNMT3A, BAX, IGF1R, and GAPDH was not significantly affected. We assume that our recombinant oviductin in its current nonglycosylated form is able to enhance sperm binding. Despite of a missing significant effect on IVF outcome, embryo quality in terms of relative GJA1 expression is influenced positively. These promising results demonstrate the value of recombinant oviductin for the IVF in cats.
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Affiliation(s)
- Romy Hribal
- Department Reproduction Biology, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany.
| | - Alexandra Hachen
- Department Reproduction Biology, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany
| | - Katarina Jewgenow
- Department Reproduction Biology, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany
| | - Jennifer Zahmel
- Department Reproduction Biology, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany
| | | | - Beate C Braun
- Department Reproduction Biology, Leibniz Institute for Zoo and Wildlife Research, Berlin, Germany
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