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Sallembien Q, Bouteiller L, Crassous J, Raynal M. Possible chemical and physical scenarios towards biological homochirality. Chem Soc Rev 2022; 51:3436-3476. [PMID: 35377372 DOI: 10.1039/d1cs01179k] [Citation(s) in RCA: 32] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The single chirality of biological molecules in terrestrial biology raises more questions than certitudes about its origin. The emergence of biological homochirality (BH) and its connection with the appearance of life have elicited a large number of theories related to the generation, amplification and preservation of a chiral bias in molecules of life under prebiotically relevant conditions. However, a global scenario is still lacking. Here, the possibility of inducing a significant chiral bias "from scratch", i.e. in the absence of pre-existing enantiomerically-enriched chemical species, will be considered first. It includes phenomena that are inherent to the nature of matter itself, such as the infinitesimal energy difference between enantiomers as a result of violation of parity in certain fundamental interactions, and physicochemical processes related to interactions between chiral organic molecules and physical fields, polarized particles, polarized spins and chiral surfaces. The spontaneous emergence of chirality in the absence of detectable chiral physical and chemical sources has recently undergone significant advances thanks to the deracemization of conglomerates through Viedma ripening and asymmetric auto-catalysis with the Soai reaction. All these phenomena are commonly discussed as plausible sources of asymmetry under prebiotic conditions and are potentially accountable for the primeval chiral bias in molecules of life. Then, several scenarios will be discussed that are aimed to reflect the different debates about the emergence of BH: extra-terrestrial or terrestrial origin (where?), nature of the mechanisms leading to the propagation and enhancement of the primeval chiral bias (how?) and temporal sequence between chemical homochirality, BH and life emergence (when?). Intense and ongoing theories regarding the emergence of optically pure molecules at different moments of the evolution process towards life, i.e. at the levels of building blocks of Life, of the instructed or functional polymers, or even later at the stage of more elaborated chemical systems, will be critically discussed. The underlying principles and the experimental evidence will be commented for each scenario with particular attention on those leading to the induction and enhancement of enantiomeric excesses in proteinogenic amino acids, natural sugars, and their intermediates or derivatives. The aim of this review is to propose an updated and timely synopsis in order to stimulate new efforts in this interdisciplinary field.
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Affiliation(s)
- Quentin Sallembien
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
| | - Laurent Bouteiller
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
| | - Jeanne Crassous
- Univ Rennes, CNRS, Institut des Sciences Chimiques de Rennes, ISCR-UMR 6226, F-35000 Rennes, France.
| | - Matthieu Raynal
- Sorbonne Université, CNRS, Institut Parisien de Chimie Moléculaire, Equipe Chimie des Polymères, 4 Place Jussieu, 75005 Paris, France.
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Chirality and Relativistic Effects in Os 3(CO) 12. Molecules 2021; 26:molecules26113333. [PMID: 34206080 PMCID: PMC8199560 DOI: 10.3390/molecules26113333] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2021] [Revised: 05/28/2021] [Accepted: 05/30/2021] [Indexed: 11/27/2022] Open
Abstract
The energy and structural parameters were obtained for all forms of the carbonyl complex of osmium Os3(CO)12 with D3h and D3 symmetries using density functional theory (DFT) methods. The calculations took into account various levels of relativistic effects, including those associated with nonconservation of spatial parity. It was shown that the ground state of Os3(CO)12 corresponds to the D3 symmetry and thus may be characterized either as left-twisted (D3S) or right-twisted (D3R). The D3S↔D3R transitions occur through the D3h transition state with an activation barrier of ~10–14 kJ/mol. Parity violation energy difference (PVED) between D3S and D3R states equals to ~5 × 10−10 kJ/mol. An unusual three-center exchange interaction was found inside the {Os3} fragment. It was found that the cooperative effects of the mutual influence of osmium atoms suppress the chirality of the electron system in the cluster.
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False Chirality, Absolute Enantioselection and CP Violation: Pierre Curie’s Legacy. MAGNETOCHEMISTRY 2020. [DOI: 10.3390/magnetochemistry6010005] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
The 1884 suggestion of Pierre Curie (1859–1906) that the type of dissymmetry shown by collinear electric and magnetic fields may induce an enantiomeric excess, in a chemical reaction that would otherwise produce a racemic mixture, is explored in the context of fundamental symmetry arguments. Curie’s arrangement exhibits false chirality (time-noninvariant enantiomorphism), and so it may not induce absolute enantioselection (ae) in a process that has reached thermodynamic equilibrium, since it does not lift the degeneracy of chiral enantiomers. However, it may do so in far-from-equilibrium processes via a breakdown in microscopic reversibility analogous to that observed in elementary particle processes under the influence of CP violation, the associated force possessing false chirality with respect to CP enantiomorphism. In contrast, an influence like circularly polarized light exhibiting true chirality (time-invariant enantiomorphism) lifts the degeneracy of enantiomers, and so may induce ae in all circumstances. Although to date, ae has not been observed under the influence of Curie’s arrangement of collinear electric and magnetic fields, it is argued that two different experiments have now demonstrated ae under a falsely chiral influence in systems far from equilibrium, namely in a spinning sample under a gravitational field, and in the separation of enantiomers at a ferromagnetic surface.
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Abstract
In this brief review, possible mechanisms which could lead to complete biological homochirality are discussed from the viewpoint of fundamental physics. In particular, the role played by electroweak parity violation, including neutrino-induced homochirality, and contributions from the gravitational interaction, will be emphasized.
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Burton AS, Berger EL. Insights into Abiotically-Generated Amino Acid Enantiomeric Excesses Found in Meteorites. Life (Basel) 2018; 8:life8020014. [PMID: 29757224 PMCID: PMC6027462 DOI: 10.3390/life8020014] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2018] [Revised: 05/09/2018] [Accepted: 05/10/2018] [Indexed: 11/16/2022] Open
Abstract
Biology exhibits homochirality, in that only one of two possible molecular configurations (called enantiomers) is used in both proteins and nucleic acids. The origin of this phenomenon is currently unknown, as nearly all known abiotic mechanisms for generating these compounds result in equal (racemic) mixtures of both enantiomers. However, analyses of primitive meteorites have revealed that a number of amino acids of extraterrestrial origin are present in enantiomeric excess, suggesting that there was an abiotic route to synthesize amino acids in a non-racemic manner. Here we review the amino acid contents of a range of meteorites, describe mechanisms for amino acid formation and their potential to produce amino acid enantiomeric excesses, and identify processes that could have amplified enantiomeric excesses.
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Affiliation(s)
- Aaron S Burton
- Astromaterials Research and Exploration Science, NASA Johnson Space Center, Houston, TX 77058, USA.
| | - Eve L Berger
- GeoControl Systems, Jacobs JETS contract, NASA Johnson Space Center, Houston, TX 77058, USA.
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Famiano MA, Boyd RN, Kajino T, Onaka T. Selection of Amino Acid Chirality via Neutrino Interactions with 14N in Crossed Electric and Magnetic Fields. ASTROBIOLOGY 2018; 18:190-206. [PMID: 29160728 PMCID: PMC5820686 DOI: 10.1089/ast.2017.1686] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2017] [Accepted: 09/03/2017] [Indexed: 05/09/2023]
Abstract
Previous work has suggested that the chirality of the amino acids could be established in the magnetic field of a nascent neutron star from a core-collapse supernova or massive collapsar. The magnetic field would orient the 14N nuclei, and the alignment of its nuclear spin with respect to those of the electron antineutrinos emitted from the collapsing star would determine the probability of destruction of the 14N nuclei by interactions with the antineutrinos. Subsequent work estimated the bulk polarization of the 14N nuclei in large rotating meteoroids in such an environment. The present work adds a crucial piece of this model by describing the details by which the selective 14N nuclear destruction would produce molecular chiral selectivity. The effects of the neutrino-induced interactions on the 14N nuclei bound in amino acids polarized in strong magnetic fields are studied. It is shown that electric fields in the reference frame of the nuclei modify the magnetic field at the nucleus, creating nuclear magnetizations that are asymmetric in chirality. The antineutrino cross sections depend on this magnetization, creating a selective destructive effect. The environmental conditions and sites in which such a selection mechanism could occur are discussed. Selective destruction of D-enantiomers results in enantiomeric excesses which may be sufficient to drive subsequent autocatalysis necessary to produce the few-percent enantiomeric excesses found in meteorites and subsequent homochirality. Molecular quantum chemical calculations were performed for alanine, and the chirality-dependent effects studied were included. A preference for left-handed molecules was found, and enantiomeric excesses as high as 0.02% were estimated for molecules in the electromagnetic conditions expected from a core-collapse supernova. Key Words: Amino acids-Supernovae-Antineutrinos-Enantiomeric excess-Chirality. Astrobiology 18, 190-206.
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Affiliation(s)
- Michael A. Famiano
- Department of Physics and Joint Institute for Nuclear Astrophysics, Western Michigan University, Kalamazoo, Michigan, USA
- National Astronomical Observatory of Japan, Tokyo, Japan
| | - Richard N. Boyd
- National Astronomical Observatory of Japan, Tokyo, Japan
- Department of Physics, Department of Astronomy, The Ohio State University, Columbus, Ohio, USA
| | - Toshitaka Kajino
- National Astronomical Observatory of Japan, Tokyo, Japan
- Department of Astronomy, Graduate School of Science, University of Tokyo, Tokyo, Japan
- School of Physics and Nuclear Energy Engineering, Beihang University (Beijing University of Aeronautics and Astronautics), Beijing, P.R. China
| | - Takashi Onaka
- Department of Astronomy, Graduate School of Science, University of Tokyo, Tokyo, Japan
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Bargueño P. Chirality and Gravitational Parity Violation. Chirality 2015; 27:375-81. [DOI: 10.1002/chir.22439] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2014] [Revised: 02/16/2015] [Accepted: 02/18/2015] [Indexed: 11/07/2022]
Affiliation(s)
- Pedro Bargueño
- Departamento de Física; Universidad de los Andes; Apartado Aéreo Bogotá Distrito Capital Colombia
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Determining Amino Acid Chirality in the Supernova Neutrino Processing Model. Symmetry (Basel) 2014. [DOI: 10.3390/sym6040909] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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Macdermott AJ. Chiroptical signatures of life and fundamental physics. Chirality 2012; 24:764-9. [PMID: 22730157 DOI: 10.1002/chir.22076] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2012] [Accepted: 04/17/2012] [Indexed: 11/10/2022]
Abstract
This paper aims to inspire experimentalists to carry out proposed new chiroptical experiments springing from the theoretical study of the role of parity violation in the origin of biomolecular homochirality and to provide a brief update on the current status of calculations of the electroweak parity-violating energy difference (PVED) between enantiomers. If the PVED did select life's handedness, we would expect to find life on other planets consistently using the same hand as terrestrial biochemistry. Much more importantly, even finding the "wrong" hand (rather than a racemic mixture) on another planet could be the homochiral signature of life, and we discuss our proposal for chiroptical detection of life on extra-solar planets. The PVED may also have an exciting future as a "molecular footprint" of fundamental physics: comparison of calculated PVEDs with measured values could one day allow chemists to do "table-top particle physics" more cheaply with improved chiroptical techniques instead of ever larger particle accelerators. We discuss our proposed chiroptical method to measure the PVED by using molecular beams. To our knowledge, optical rotation has not yet been measured in molecular beams, but the rewards of doing so include a host of other "first ever" results in addition to measurement of the PVED.
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Cintas P, Viedma C. On the physical basis of asymmetry and homochirality. Chirality 2012; 24:894-908. [PMID: 22678980 DOI: 10.1002/chir.22028] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2011] [Accepted: 02/03/2012] [Indexed: 11/05/2022]
Abstract
Mirror symmetry breaking is ubiquitous in our visible universe taking place in elementary particles, atoms, and molecules. Molecular chirality is not biogenic in itself, although its detection is often considered a biosignature, a conjecture inferred from the fact that we do not know life devoid of homochirality. The question of whether there is a connection between the cosmic preference for one enantiomer, as imposed by the weak force, and the single chirality displayed on Earth is vividly debated. This article gives a glimpse on the origin of asymmetry from a cosmological perspective and on physical transformations that lead to an enantiomeric imbalance, leaving chemical reactions essentially aside. These processes are more plausible as sources of prebiotic chirality than asymmetric amplifications requiring unnatural substrates and conditions and fighting against racemization. The latter may actually be a friend, not foe, and a driving force for enantioselection.
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Affiliation(s)
- Pedro Cintas
- Departamento de Química Orgánica e Inorgánica, Facultad de Ciencias, Universidad de Extremadura, Badajoz, Spain.
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Bargueño P, de Tudela RP, Miret-Artés S, Gonzalo I. An alternative route to detect parity violating energy differences through Bose–Einstein condensation of chiral molecules. Phys Chem Chem Phys 2011; 13:806-10. [DOI: 10.1039/c0cp00907e] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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MacDermott AJ, Fu T, Hyde GO, Nakatsuka R, Coleman AP. Electroweak parity-violating energy shifts of amino acids: the "conformation problem". ORIGINS LIFE EVOL B 2009; 39:407-37. [PMID: 19291419 DOI: 10.1007/s11084-009-9161-x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2007] [Accepted: 02/10/2009] [Indexed: 10/21/2022]
Abstract
The preceding paper described our coupled-perturbed Hartree-Fock (CPHF) and density functional theory (DFT) methods of computing the parity-violating energy shift (PVES). This paper addresses the "conformation problem"-the difficulty determining which hand of amino acids in solution is favoured by the weak force due to the difficulty determining the solution conformation. We attempt to resolve this by using the methods of the preceding paper to compute the PVES of solution and gas-phase amino acid structures determined by other groups from high level optimizations that include solvation. We conclude that the conformational hypersensitivity of the PVES still precludes a definite conclusion as to the sign of the PVES of L-alanine in solution, but that there is no problem in the gas phase: the PVES of gas-phase L-alanine is decisively negative. We show that the PVES is very sensitive to certain torsion angles, but is not hypersensitive to bondlengths or bond angles. In determining structures for PVES computations, there is therefore no need for expensive full optimizations: one can just optimize the crucial torsion angles. We present new computations of gas-phase amino acids PVESs, using partial optimizations with small basis sets, and the results agree well with those from higher level techniques. In the following paper we apply these less costly techniques to larger amino acids. The "conformation problem" has led some to dismiss the PVES as the source of life's handedness, but we believe this is premature: we show here that amino acids are a special case because their favoured conformations are almost achiral.
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Affiliation(s)
- A J MacDermott
- Department of Chemistry, School of Science, Computing and Engineering, University of Houston-Clear Lake, 2700 Bay Area Boulevard, Houston, TX 77058-1098, USA.
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