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Chen H, Wu ZZ, Shao DY, Huang PQ. Multicatalysis protocol enables direct and versatile enantioselective reductive transformations of secondary amides. SCIENCE ADVANCES 2022; 8:eade3431. [PMID: 36417504 PMCID: PMC9683713 DOI: 10.1126/sciadv.ade3431] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/11/2022] [Accepted: 10/04/2022] [Indexed: 06/16/2023]
Abstract
The catalytic asymmetric geminal bis-nucleophilic addition to nonreactive functional groups is a type of highly desirable yet challenging transformation in organic chemistry. Here, we report the first catalytic asymmetric reductive/deoxygenative alkynylation of secondary amides. The method is based on a multicatalysis strategy that merges iridium/copper relay catalysis with organocatalysis. A further combination with the palladium-catalyzed alkyne hydrogenation allows the one-pot enantioselective reductive alkylation of secondary amides. This versatile protocol allows the efficient synthesis of four types of α-branched chiral amines, which are prevalent structural motifs of active pharmaceutical ingredients. The protocol also features excellent enantioselectivity, chemoselectivity, and functional group tolerance to be compatible with more reactive functional groups such as ketone and aldehyde. The synthetic utility of the method was further demonstrated by the late-stage functionalization of two drug derivatives and the concise, first catalytic asymmetric approach to the κ-opioid antagonist aticaprant.
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Mayack C, Macherone A, Zaki AG, Filiztekin E, Özkazanç B, Koperly Y, Schick SJ, Eppley EJ, Deb M, Ambiel N, Schafsnitz AM, Broadrup RL. Environmental exposures associated with honey bee health. CHEMOSPHERE 2022; 286:131948. [PMID: 34426277 DOI: 10.1016/j.chemosphere.2021.131948] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2021] [Revised: 08/16/2021] [Accepted: 08/17/2021] [Indexed: 06/13/2023]
Abstract
Bee health is declining on a global scale, yet the exact causes and their interactions responsible for the decline remain unknown. To more objectively study bee health, recently biomarkers have been proposed as an essential tool, because they can be rapidly quantified and standardized, serving as a comparable measure across bee species and varying environments. Here, we used a systems biology approach to draw associations between endogenous and exogenous chemical profiles, with pesticide exposure, or the abundance of the 21 most common honey bee diseases. From the analysis we identified chemical biomarkers for both pesticide exposure and bee diseases along with the mechanistic biological pathways that may influence disease onset and progression. We found a total of 2352 chemical features, from 30 different hives, sampled from seven different locations. Of these, a total of 1088 significant associations were found that could serve as chemical biomarker profiles for predicting both pesticide exposure and the presence of diseases in a bee colony. In almost all cases we found novel external environmental exposures within the top seven associations with bee diseases and pesticide exposures, with the majority having previously unknown connections to bee health. We highlight the exposure-outcome paradigm and its ability to identify previously uncategorized interactions from different environmental exposures associated with bee diseases, pesticides, mechanisms, and potential synergistic interactions of these that are responsible for honey bee health decline.
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Affiliation(s)
- Christopher Mayack
- Department of Biology, Swarthmore College, Swarthmore, PA, USA; Molecular Biology, Genetics, and Bioengineering, Faculty of Engineering and Natural Sciences, Sabancı University, İstanbul, Turkey.
| | - Anthony Macherone
- Life Science and Chemical Analysis Group, Agilent Technologies, Santa Clara, CA, USA; Department of Biological Chemistry, The Johns Hopkins University School of Medicine, Baltimore, MD, USA
| | - Asal Ghaffari Zaki
- Molecular Biology, Genetics, and Bioengineering, Faculty of Engineering and Natural Sciences, Sabancı University, İstanbul, Turkey
| | - Elif Filiztekin
- Molecular Biology, Genetics, and Bioengineering, Faculty of Engineering and Natural Sciences, Sabancı University, İstanbul, Turkey
| | - Burcu Özkazanç
- Molecular Biology, Genetics, and Bioengineering, Faculty of Engineering and Natural Sciences, Sabancı University, İstanbul, Turkey
| | - Yasameen Koperly
- Molecular Biology, Genetics, and Bioengineering, Faculty of Engineering and Natural Sciences, Sabancı University, İstanbul, Turkey
| | | | | | - Moniher Deb
- Department of Biology, Swarthmore College, Swarthmore, PA, USA
| | - Nicholas Ambiel
- Department of Biology, Swarthmore College, Swarthmore, PA, USA
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Novel Positive Allosteric Modulators of AMPA Receptors Based on 3,7-Diazabicyclo[3.3.1]nonane Scaffold. Mol Neurobiol 2019; 57:191-199. [PMID: 31515692 DOI: 10.1007/s12035-019-01768-6] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2019] [Accepted: 08/29/2019] [Indexed: 01/19/2023]
Abstract
A series of new positive allosteric modulators (PAMs) of α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptors based on 3,7-diazabicyclo[3.3.1]nonane scaffold have been designed, synthesized, and analyzed. In electrophysiological patch clamp studies, several compounds have demonstrated a sub-nanomolar potency. Compound 4 in in vivo tests showed anti-amnestic properties in the scopolamine-induced model of amnesia in the step-through passive avoidance or maximal electroshock experiments in rats at 0.01 mg/kg showing a significant "dose-response" advantage over memantine. Based on the analysis of the flexible docking results of PAMs, the cyclothiazide-like mechanism of binding mode was suggested as the major site for the interaction with AMPA receptors.
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Nazarova AA, Sedenkova KN, Karlov DS, Lavrov MI, Grishin YK, Kuznetsova TS, Zamoyski VL, Grigoriev VV, Averina EB, Palyulin VA. Bivalent AMPA receptor positive allosteric modulators of the bis(pyrimidine) series. MEDCHEMCOMM 2019; 10:1615-1619. [PMID: 31803402 PMCID: PMC6837176 DOI: 10.1039/c9md00262f] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2019] [Accepted: 07/10/2019] [Indexed: 12/17/2022]
Abstract
The first example of a novel class of AMPA receptor positive allosteric modulators of the bis(pyrimidine) series having a hydroquinone linker has been obtained and showed a potency to increase kainate-induced currents at subnanomolar concentrations.
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Affiliation(s)
- Anna A Nazarova
- Department of Chemistry , Lomonosov Moscow State University , 119991 Moscow , Russian Federation . ;
| | - Kseniya N Sedenkova
- Department of Chemistry , Lomonosov Moscow State University , 119991 Moscow , Russian Federation . ;
- Institute of Physiologically Active Compounds , Russian Academy of Sciences , 142432 Chernogolovka , Moscow Region , Russian Federation
| | - Dmitry S Karlov
- Department of Chemistry , Lomonosov Moscow State University , 119991 Moscow , Russian Federation . ;
- Center for Computational and Data-intensive Science and Engineering , Skolkovo Institute of Science and Technology , 121205 Moscow , Russian Federation
| | - Mstislav I Lavrov
- Department of Chemistry , Lomonosov Moscow State University , 119991 Moscow , Russian Federation . ;
- Institute of Physiologically Active Compounds , Russian Academy of Sciences , 142432 Chernogolovka , Moscow Region , Russian Federation
| | - Yuri K Grishin
- Department of Chemistry , Lomonosov Moscow State University , 119991 Moscow , Russian Federation . ;
| | - Tamara S Kuznetsova
- Department of Chemistry , Lomonosov Moscow State University , 119991 Moscow , Russian Federation . ;
| | - Vladimir L Zamoyski
- Institute of Physiologically Active Compounds , Russian Academy of Sciences , 142432 Chernogolovka , Moscow Region , Russian Federation
| | - Vladimir V Grigoriev
- Department of Chemistry , Lomonosov Moscow State University , 119991 Moscow , Russian Federation . ;
- Institute of Physiologically Active Compounds , Russian Academy of Sciences , 142432 Chernogolovka , Moscow Region , Russian Federation
| | - Elena B Averina
- Department of Chemistry , Lomonosov Moscow State University , 119991 Moscow , Russian Federation . ;
- Institute of Physiologically Active Compounds , Russian Academy of Sciences , 142432 Chernogolovka , Moscow Region , Russian Federation
| | - Vladimir A Palyulin
- Department of Chemistry , Lomonosov Moscow State University , 119991 Moscow , Russian Federation . ;
- Institute of Physiologically Active Compounds , Russian Academy of Sciences , 142432 Chernogolovka , Moscow Region , Russian Federation
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Lavrov MI, Karlov DS, Palyulin VA, Grigoriev VV, Zamoyski VL, Brkich GE, Pyatigorskaya NV, Zapolskiy ME. Novel positive allosteric modulator of AMPA-receptors based on tricyclic scaffold. MENDELEEV COMMUNICATIONS 2018. [DOI: 10.1016/j.mencom.2018.05.028] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Karlov DS, Lavrov MI, Palyulin VA, Zefirov NS. MM-GBSA and MM-PBSA performance in activity evaluation of AMPA receptor positive allosteric modulators. J Biomol Struct Dyn 2017; 36:2508-2516. [DOI: 10.1080/07391102.2017.1360208] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Dmitry S. Karlov
- Department of Chemistry, Lomonosov Moscow State University, 1 Build. 3, Leninskie Gory, Moscow, 119991 Russian Federation
- Institute of Physiologically Active Compounds, Russian Academy of Sciences, 1 Severny proezd, Chernogolovka, Moscow Region 142432, Russian Federation
| | - Mstislav I. Lavrov
- Department of Chemistry, Lomonosov Moscow State University, 1 Build. 3, Leninskie Gory, Moscow, 119991 Russian Federation
- Institute of Physiologically Active Compounds, Russian Academy of Sciences, 1 Severny proezd, Chernogolovka, Moscow Region 142432, Russian Federation
| | - Vladimir A. Palyulin
- Department of Chemistry, Lomonosov Moscow State University, 1 Build. 3, Leninskie Gory, Moscow, 119991 Russian Federation
- Institute of Physiologically Active Compounds, Russian Academy of Sciences, 1 Severny proezd, Chernogolovka, Moscow Region 142432, Russian Federation
| | - Nikolay S. Zefirov
- Department of Chemistry, Lomonosov Moscow State University, 1 Build. 3, Leninskie Gory, Moscow, 119991 Russian Federation
- Institute of Physiologically Active Compounds, Russian Academy of Sciences, 1 Severny proezd, Chernogolovka, Moscow Region 142432, Russian Federation
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Wu X, Fan W, Pan Y, Zhai Y, Niu Y, Li C, Mei Q. Synthesis, crystal structure and anti-fatigue effects of some benzamide derivatives. Molecules 2014; 19:1034-46. [PMID: 24441653 PMCID: PMC6271547 DOI: 10.3390/molecules19011034] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2013] [Revised: 01/10/2014] [Accepted: 01/10/2014] [Indexed: 11/23/2022] Open
Abstract
A series of benzamide derivatives such as 1-(1,3-benzodioxol-5-ylcarbonyl) piperidine (1-BCP) were synthesized by the reaction of substituted benzoic acids with piperidine, morpholine or pyrrolidine using a novel method. The crystals of these benzamide derivatives were obtained by recrystallization. Structures of target and intermediate compounds were determined via FT-IR, 1H-NMR and elemental analysis and X-ray crystallography of select examples. The crystal structures of these compounds have potential applications to identify the binding site for allosteric modulators of the α-amino-3-hydroxy-5-methylisoxazole-4-propionic acid (AMPA) receptor. The anti-fatigue effects of the benzamide derivatives in weight-loaded forced swimming mice were investigated in a swimming endurance capacity test used as an indicator of fatigue. The swimming times to exhaustion were longer in the b3, d3, and e3 groups than in the caffeine group (p<0.05). In conclusion, b3, d3 and e3 enhanced the forced swimming capacity of mice. The mechanism of the anti-fatigue effects will be studied in the future.
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Affiliation(s)
- Xianglong Wu
- Key Laboratory for Space Bioscience and Biotechnology, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China.
| | - Wutu Fan
- Key Laboratory for Space Bioscience and Biotechnology, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China
| | - Yalei Pan
- Key Laboratory for Space Bioscience and Biotechnology, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China
| | - Yuankun Zhai
- Key Laboratory for Space Bioscience and Biotechnology, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China
| | - Yinbo Niu
- Key Laboratory for Space Bioscience and Biotechnology, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China
| | - Chenrui Li
- Key Laboratory for Space Bioscience and Biotechnology, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China
| | - Qibing Mei
- Key Laboratory for Space Bioscience and Biotechnology, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China.
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