1
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Schumann C, Fernández Méndez J, Berggren G, Lindblad P. Novel concepts and engineering strategies for heterologous expression of efficient hydrogenases in photosynthetic microorganisms. Front Microbiol 2023; 14:1179607. [PMID: 37502399 PMCID: PMC10369191 DOI: 10.3389/fmicb.2023.1179607] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2023] [Accepted: 06/09/2023] [Indexed: 07/29/2023] Open
Abstract
Hydrogen is considered one of the key enablers of the transition towards a sustainable and net-zero carbon economy. When produced from renewable sources, hydrogen can be used as a clean and carbon-free energy carrier, as well as improve the sustainability of a wide range of industrial processes. Photobiological hydrogen production is considered one of the most promising technologies, avoiding the need for renewable electricity and rare earth metal elements, the demands for which are greatly increasing due to the current simultaneous electrification and decarbonization goals. Photobiological hydrogen production employs photosynthetic microorganisms to harvest solar energy and split water into molecular oxygen and hydrogen gas, unlocking the long-pursued target of solar energy storage. However, photobiological hydrogen production has to-date been constrained by several limitations. This review aims to discuss the current state-of-the art regarding hydrogenase-driven photobiological hydrogen production. Emphasis is placed on engineering strategies for the expression of improved, non-native, hydrogenases or photosynthesis re-engineering, as well as their combination as one of the most promising pathways to develop viable large-scale hydrogen green cell factories. Herein we provide an overview of the current knowledge and technological gaps curbing the development of photobiological hydrogenase-driven hydrogen production, as well as summarizing the recent advances and future prospects regarding the expression of non-native hydrogenases in cyanobacteria and green algae with an emphasis on [FeFe] hydrogenases.
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Affiliation(s)
- Conrad Schumann
- Molecular Biomimetics, Department of Chemistry - Ångström, Uppsala University, Uppsala, Sweden
| | - Jorge Fernández Méndez
- Microbial Chemistry, Department of Chemistry - Ångström, Uppsala University, Uppsala, Sweden
| | - Gustav Berggren
- Molecular Biomimetics, Department of Chemistry - Ångström, Uppsala University, Uppsala, Sweden
| | - Peter Lindblad
- Microbial Chemistry, Department of Chemistry - Ångström, Uppsala University, Uppsala, Sweden
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2
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Xu X, Wu X, Xu W, Sun Y, Zhang L, Yang Z. Water acidification weakens the carbon sink capacity of mixotrophic organisms. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 865:161120. [PMID: 36581282 DOI: 10.1016/j.scitotenv.2022.161120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Revised: 12/17/2022] [Accepted: 12/18/2022] [Indexed: 06/17/2023]
Abstract
Mixotrophs combine both autotrophic and heterotrophic cell structures, and their highly plastic nutritional modes can shape the structure of food web and affect the carbon sink capacity of aquatic ecosystems. As pH affects the growth of phytoplankton by altering the carbonate balance system, water acidification caused by environmental pollution and global climate change may affect the nutritional modes of mixotrophs and bring a serious environmental consequence. In this study, we cultured mixotrophic Ochromonas gloeopara under autotrophic, mixotrophic, and heterotrophic conditions at different pH levels to test the tendency of its nutritional model and the changes in photosynthetic carbon fixation capacity. Results showed that: (1) with decreasing pH, carbon uptake of Ochromonas through phagocytosis gradually replaced the carbon fixation of photosynthesis; (2) with increasing pH, Ochromonas grazing rate decreased, and the relative contribution of photosynthetic carbon fixation to total carbon acquisition increased for Ochromonas; (3) Ochromonas became more heterotrophic under water acidification, which was involved in the up-regulated expression of genes encoding key enzymes that regulate nutrient perception, movement ability, and cell repair. These findings suggested that acidification caused mixotrophic organisms to become more heterotrophic, which can change their functional role and weaken their carbon sink capacity.
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Affiliation(s)
- Xiaoqing Xu
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, School of Biological Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China.
| | - Xiyi Wu
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, School of Biological Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China.
| | - Wenjie Xu
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, School of Biological Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China.
| | - Yunfei Sun
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, School of Biological Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China.
| | - Lu Zhang
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, School of Biological Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China.
| | - Zhou Yang
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, School of Biological Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing 210023, China.
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3
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Biorefinery Processing of Waste to Supply Cost-Effective and Sustainable Inputs for Two-Stage Microalgal Cultivation. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12031485] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Overcoming obstacles to commercialization of algal-based processes for biofuels and co-products requires not just piecemeal incremental improvements, but rather a comprehensive and fundamental re-consideration starting with the selected algae and its associated cultivation, harvesting, biomass conversion, and refinement. A novel two-stage process designed to address challenges of mass outdoor microalgal cultivation for biofuels and co-products was previously demonstrated using an oleaginous, haloalkaline-tolerant, and multi-trophic green Chlorella vulgaris. ALP2 from a soda lake. This involved cultivating the microalgae in a fermenter heterotrophically or photobioreactor mixotrophically (first-stage) to rapidly obtain high cell densities and inoculate an open-pond phototrophic culture (second-stage) featuring high levels of NaHCO3, pH, and salinity. An improved two-stage cultivation that instead sustainably used as more cheap and sustainable inputs the organic carbon, nitrogen, and phosphorous from fractionation of waste was here demonstrated in a small-scale biorefinery process. The first cultivation stage consisted of two simultaneous batch flask cultures featuring (1) mixotrophic cell productivity of 7.25 × 107 cells mL−1 day−1 on BG-110 medium supplemented with 1.587 g L−1 urea and an enzymatic hydrolysate of pre-treated (torrefaction + grinding + ozonolysis + soaking ammonia) wheat-straw that corresponded to 10 g L−1 glucose, and (2) mixotrophic cell productivity of 2.25 × 107 cells mL−1 day−1 on BG-110 medium supplemented with 1.587 g L−1 urea and a purified and de-toxified condensate of pre-treated (torrefaction + grinding) wheat straw that corresponded to 0.350 g L−1 of potassium acetate. The second cultivation stage featured 1H NMR-determined phototrophic lipid productivity of 0.045 g triacylglycerides (TAG) L−1 day−1 on BG-110 medium supplemented with 16.8 g L−1 NaHCO3 and fed batch-added 22% (v/v) anaerobically digested food waste effluent at HCl-mediated pH 9.
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Ostermeier M, Heinz S, Hamm J, Zabret J, Rast A, Klingl A, Nowaczyk MM, Nickelsen J. Thylakoid attachment to the plasma membrane in Synechocystis sp. PCC 6803 requires the AncM protein. THE PLANT CELL 2022; 34:655-678. [PMID: 34665262 PMCID: PMC8846179 DOI: 10.1093/plcell/koab253] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2021] [Accepted: 10/06/2021] [Indexed: 06/13/2023]
Abstract
Thylakoids are the highly specialized internal membrane systems that harbor the photosynthetic electron transport machinery in cyanobacteria and in chloroplasts. In Synechocystis sp. PCC 6803, thylakoid membranes (TMs) are arranged in peripheral sheets that occasionally converge on the plasma membrane (PM) to form thylakoid convergence membranes (TCMs). TCMs connect several thylakoid sheets and form local contact sites called thylapses between the two membrane systems, at which the early steps of photosystem II (PSII) assembly occur. The protein CurT is one of the main drivers of TCM formation known so far. Here, we identify, by whole-genome sequencing of a curT- suppressor strain, the protein anchor of convergence membranes (AncM) as a factor required for the attachment of thylakoids to the PM at thylapses. An ancM- mutant is shown to have a photosynthetic phenotype characterized by reductions in oxygen-evolution rate, PSII accumulation, and PS assembly. Moreover, the ancM- strain exhibits an altered thylakoid ultrastructure with additional sheets and TCMs detached from the PM. By combining biochemical studies with fluorescence and correlative light-electron microscopy-based approaches, we show that AncM is an integral membrane protein located in biogenic TCMs that form thylapses. These data suggest an antagonistic function of AncM and CurT in shaping TM ultrastructure.
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Affiliation(s)
- Matthias Ostermeier
- Department of Molecular Plant Science, LMU Munich, Planegg-Martinsried, 82152, Germany
| | - Steffen Heinz
- Department of Molecular Plant Science, LMU Munich, Planegg-Martinsried, 82152, Germany
| | - Julia Hamm
- Department of Molecular Plant Science, LMU Munich, Planegg-Martinsried, 82152, Germany
| | - Jure Zabret
- Department of Plant Biochemistry, Ruhr-University Bochum, Bochum 44801, Germany
| | - Anna Rast
- Department of Molecular Plant Science, LMU Munich, Planegg-Martinsried, 82152, Germany
| | - Andreas Klingl
- Department of Plant Development, LMU Munich, Planegg-Martinsried, 82152, Germany
| | - Marc M Nowaczyk
- Department of Plant Biochemistry, Ruhr-University Bochum, Bochum 44801, Germany
| | - Jörg Nickelsen
- Department of Molecular Plant Science, LMU Munich, Planegg-Martinsried, 82152, Germany
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Li XD, Tan ZZ, Ding WL, Hou YN, Kong CD, Zhao BQ, Zhao KH. Design of small monomeric and highly bright near-infrared fluorescent proteins. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2019; 1866:1608-1617. [DOI: 10.1016/j.bbamcr.2019.06.018] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2019] [Revised: 06/21/2019] [Accepted: 06/30/2019] [Indexed: 11/16/2022]
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6
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Luimstra VM, Schuurmans JM, de Carvalho CFM, Matthijs HCP, Hellingwerf KJ, Huisman J. Exploring the low photosynthetic efficiency of cyanobacteria in blue light using a mutant lacking phycobilisomes. PHOTOSYNTHESIS RESEARCH 2019; 141:291-301. [PMID: 30820745 PMCID: PMC6718569 DOI: 10.1007/s11120-019-00630-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2018] [Accepted: 02/19/2019] [Indexed: 05/28/2023]
Abstract
The ubiquitous chlorophyll a (Chl a) pigment absorbs both blue and red light. Yet, in contrast to green algae and higher plants, most cyanobacteria have much lower photosynthetic rates in blue than in red light. A plausible but not yet well-supported hypothesis is that blue light results in limited energy transfer to photosystem II (PSII), because cyanobacteria invest most Chl a in photosystem I (PSI), whereas their phycobilisomes (PBS) are mostly associated with PSII but do not absorb blue photons. In this paper, we compare the photosynthetic performance in blue and orange-red light of wildtype Synechocystis sp. PCC 6803 and a PBS-deficient mutant. Our results show that the wildtype had much lower biomass, Chl a content, PSI:PSII ratio and O2 production rate per PSII in blue light than in orange-red light, whereas the PBS-deficient mutant had a low biomass, Chl a content, PSI:PSII ratio, and O2 production rate per PSII in both light colors. More specifically, the wildtype displayed a similar low photosynthetic efficiency in blue light as the PBS-deficient mutant in both light colors. Our results demonstrate that the absorption of light energy by PBS and subsequent transfer to PSII are crucial for efficient photosynthesis in cyanobacteria, which may explain both the low photosynthetic efficiency of PBS-containing cyanobacteria and the evolutionary success of chlorophyll-based light-harvesting antennae in environments dominated by blue light.
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Affiliation(s)
- Veerle M Luimstra
- Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, PO Box 94240, 1090 GE, Amsterdam, The Netherlands
- Wetsus, European Centre of Excellence for Sustainable Water Technology, Oostergoweg 9, 8911 MA, Leeuwarden, The Netherlands
| | - J Merijn Schuurmans
- Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, PO Box 94240, 1090 GE, Amsterdam, The Netherlands
| | - Carolina F M de Carvalho
- Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, PO Box 94240, 1090 GE, Amsterdam, The Netherlands
| | - Hans C P Matthijs
- Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, PO Box 94240, 1090 GE, Amsterdam, The Netherlands
| | - Klaas J Hellingwerf
- Swammerdam Institute for Life Sciences, University of Amsterdam, PO Box 94248, 1090 GE, Amsterdam, The Netherlands
| | - Jef Huisman
- Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, PO Box 94240, 1090 GE, Amsterdam, The Netherlands.
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7
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Zlenko DV, Elanskaya IV, Lukashev EP, Bolychevtseva YV, Suzina NE, Pojidaeva ES, Kononova IA, Loktyushkin AV, Stadnichuk IN. Role of the PB-loop in ApcE and phycobilisome core function in cyanobacterium Synechocystis sp. PCC 6803. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2019; 1860:155-166. [DOI: 10.1016/j.bbabio.2018.10.004] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2018] [Revised: 10/04/2018] [Accepted: 10/29/2018] [Indexed: 11/30/2022]
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8
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Veaudor T, Ortega-Ramos M, Jittawuttipoka T, Bottin H, Cassier-Chauvat C, Chauvat F. Overproduction of the cyanobacterial hydrogenase and selection of a mutant thriving on urea, as a possible step towards the future production of hydrogen coupled with water treatment. PLoS One 2018; 13:e0198836. [PMID: 29879209 PMCID: PMC5991728 DOI: 10.1371/journal.pone.0198836] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2017] [Accepted: 05/25/2018] [Indexed: 01/01/2023] Open
Abstract
Using a combination of various types of genetic manipulations (promoter replacement and gene cloning in replicating plasmid expression vector), we have overproduced the complex hydrogenase enzyme in the model cyanobacterium Synechocystis PCC6803. This new strain overproduces all twelve following proteins: HoxEFUYH (hydrogen production), HoxW (maturation of the HoxH subunit of hydrogenase) and HypABCDEF (assembly of the [NiFe] redox center of HoxHY hydrogenase). This strain when grown in the presence of a suitable quantities of nickel and iron used here exhibits a strong (25-fold) increase in hydrogenase activity, as compared to the WT strain growing in the standard medium. Hence, this strain can be very useful for future analyses of the cyanobacterial [NiFe] hydrogenase to determine its structure and, in turn, improve its tolerance to oxygen with the future goal of increasing hydrogen production. We also report the counterintuitive notion that lowering the activity of the Synechocystis urease can increase the photoproduction of biomass from urea-polluted waters, without decreasing hydrogenase activity. Such cyanobacterial factories with high hydrogenase activity and a healthy growth on urea constitute an important step towards the future development of an economical industrial processes coupling H2 production from solar energy and CO2, with wastewater treatment (urea depollution).
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Affiliation(s)
- Théo Veaudor
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
| | - Marcia Ortega-Ramos
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
| | - Thichakorn Jittawuttipoka
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
| | - Hervé Bottin
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
| | - Corinne Cassier-Chauvat
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
| | - Franck Chauvat
- Institute for Integrative Biology of the Cell (I2BC), CEA, CNRS, Univ Paris‐Sud, Université Paris‐Saclay, Gif‐sur‐Yvette, France
- * E-mail:
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9
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Bernát G, Steinbach G, Kaňa R, Misra AN, Prašil O. On the origin of the slow M-T chlorophyll a fluorescence decline in cyanobacteria: interplay of short-term light-responses. PHOTOSYNTHESIS RESEARCH 2018; 136:183-198. [PMID: 29090427 DOI: 10.1007/s11120-017-0458-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2017] [Accepted: 09/21/2017] [Indexed: 06/07/2023]
Abstract
The slow kinetic phases of the chlorophyll a fluorescence transient (induction) are valuable tools in studying dynamic regulation of light harvesting, light energy distribution between photosystems, and heat dissipation in photosynthetic organisms. However, the origin of these phases are not yet fully understood. This is especially true in the case of prokaryotic oxygenic photoautotrophs, the cyanobacteria. To understand the origin of the slowest (tens of minutes) kinetic phase, the M-T fluorescence decline, in the context of light acclimation of these globally important microorganisms, we have compared spectrally resolved fluorescence induction data from the wild type Synechocystis sp. PCC 6803 cells, using orange (λ = 593 nm) actinic light, with those of mutants, ΔapcD and ΔOCP, that are unable to perform either state transition or fluorescence quenching by orange carotenoid protein (OCP), respectively. Our results suggest a multiple origin of the M-T decline and reveal a complex interplay of various known regulatory processes in maintaining the redox homeostasis of a cyanobacterial cell. In addition, they lead us to suggest that a new type of regulatory process, operating on the timescale of minutes to hours, is involved in dissipating excess light energy in cyanobacteria.
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Affiliation(s)
- Gábor Bernát
- Laboratory of Photosynthesis, Institute of Microbiology, Academy of Sciences, Opatovicky mlyn, 379 81, Třeboň, Czech Republic.
| | - Gábor Steinbach
- Laboratory of Photosynthesis, Institute of Microbiology, Academy of Sciences, Opatovicky mlyn, 379 81, Třeboň, Czech Republic
- Institute of Biophysics, Biological Research Centre, Hungarian Academy of Sciences, Temesvári krt. 62, Szeged, 6726, Hungary
| | - Radek Kaňa
- Laboratory of Photosynthesis, Institute of Microbiology, Academy of Sciences, Opatovicky mlyn, 379 81, Třeboň, Czech Republic
| | - Amarendra N Misra
- Centre for Life Sciences, Central University of Jharkand, Ranchi, 835205, Jharkand, India
- Khallikote Cluster University, Berhampur, 76001, Odisha, India
| | - Ondřej Prašil
- Laboratory of Photosynthesis, Institute of Microbiology, Academy of Sciences, Opatovicky mlyn, 379 81, Třeboň, Czech Republic
- Faculty of Sciences, University of South Bohemia in České Budějovice, 37005, Ceske Budejovice, Czech Republic
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Rewiring of Cyanobacterial Metabolism for Hydrogen Production: Synthetic Biology Approaches and Challenges. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2018; 1080:171-213. [PMID: 30091096 DOI: 10.1007/978-981-13-0854-3_8] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/06/2022]
Abstract
With the demand for renewable energy growing, hydrogen (H2) is becoming an attractive energy carrier. Developing H2 production technologies with near-net zero carbon emissions is a major challenge for the "H2 economy." Certain cyanobacteria inherently possess enzymes, nitrogenases, and bidirectional hydrogenases that are capable of H2 evolution using sunlight, making them ideal cell factories for photocatalytic conversion of water to H2. With the advances in synthetic biology, cyanobacteria are currently being developed as a "plug and play" chassis to produce H2. This chapter describes the metabolic pathways involved and the theoretical limits to cyanobacterial H2 production and summarizes the metabolic engineering technologies pursued.
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11
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Liberton M, Chrisler WB, Nicora CD, Moore RJ, Smith RD, Koppenaal DW, Pakrasi HB, Jacobs JM. Phycobilisome truncation causes widespread proteome changes in Synechocystis sp. PCC 6803. PLoS One 2017; 12:e0173251. [PMID: 28253354 PMCID: PMC5333879 DOI: 10.1371/journal.pone.0173251] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2016] [Accepted: 02/17/2017] [Indexed: 11/18/2022] Open
Abstract
In cyanobacteria such as Synechocystis sp. PCC 6803, large antenna complexes called phycobilisomes (PBS) harvest light and transfer the energy to the photosynthetic reaction centers. Modification of the light harvesting machinery in cyanobacteria has widespread consequences, causing changes in cell morphology and physiology. In the current study, we investigated the effects of PBS truncation on the proteomes of three Synechocystis 6803 PBS antenna mutants. These range from the progressive truncation of phycocyanin rods in the CB and CK strains, to full removal of PBS in the PAL mutant. Comparative quantitative protein results revealed surprising changes in protein abundances in the mutant strains. Our results showed that PBS truncation in Synechocystis 6803 broadly impacted core cellular mechanisms beyond light harvesting and photosynthesis. Specifically, we observed dramatic alterations in membrane transport mechanisms, where the most severe PBS truncation in the PAL strain appeared to suppress the cellular utilization and regulation of bicarbonate and iron. These changes point to the role of PBS as a component critical to cell function, and demonstrate the continuing need to assess systems-wide protein based abundances to understand potential indirect phenotypic effects.
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Affiliation(s)
- Michelle Liberton
- Department of Biology, Washington University, St. Louis, Missouri, United States of America
| | - William B. Chrisler
- Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington, United States of America
| | - Carrie D. Nicora
- Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America
| | - Ronald J. Moore
- Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America
| | - Richard D. Smith
- Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America
| | - David W. Koppenaal
- Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington, United States of America
| | - Himadri B. Pakrasi
- Department of Biology, Washington University, St. Louis, Missouri, United States of America
| | - Jon M. Jacobs
- Biological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America
- * E-mail:
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12
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Nagarajan D, Lee DJ, Kondo A, Chang JS. Recent insights into biohydrogen production by microalgae - From biophotolysis to dark fermentation. BIORESOURCE TECHNOLOGY 2017; 227:373-387. [PMID: 28089136 DOI: 10.1016/j.biortech.2016.12.104] [Citation(s) in RCA: 89] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2016] [Revised: 12/24/2016] [Accepted: 12/27/2016] [Indexed: 06/06/2023]
Abstract
One of the best options to alleviate the problems associated with global warming and climate change is to reduce burning of fossil fuels and search for new alternative energy resources. In case of biodiesel and bioethanol production, the choice of feedstock and the process design influences the GHG emissions and appropriate methods need to be adapted. Hydrogen is a zero-carbon and energy dense alternative energy carrier with clean burning properties and biohydrogen production by microalgae can reduce production associated GHG emissions to a great extent. Biohydrogen can be produced through dark fermentation using sugars, starch, or cellulosic materials. Microalgae-based biohydrogen production is recently regarded as a promising pathway for biohydrogen production via photolysis or being a substrate for anaerobic fermentation. This review lists the methods of hydrogen production by microalgae. The enzymes involved and the factors affecting the biohydrogen production process are discussed. The bottlenecks in microalgae-based biohydrogen production are critically reviewed and future research areas in hydrogen production are presented.
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Affiliation(s)
- Dillirani Nagarajan
- Department of Chemical Engineering, National Cheng Kung University, Tainan, Taiwan; Department of Chemical Engineering, National Taiwan University, Taipei, Taiwan
| | - Duu-Jong Lee
- Department of Chemical Engineering, National Taiwan University, Taipei, Taiwan
| | - Akihiko Kondo
- Department of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, 1-1 Rokkodai, Nada-ku, Kobe 657-8501, Japan; Core Research for Evolutional Science and Technology, Japan Science and Technology Agency, 3-5 Sanbancho, Chiyoda-ku, Tokyo 102-0075, Japan; Biomass Engineering Program, RIKEN, 1-7-22 Suehiro, Tsurumi-ku, Yokohama 230-0045, Japan
| | - Jo-Shu Chang
- Department of Chemical Engineering, National Cheng Kung University, Tainan, Taiwan; Research Center for Energy Technology and Strategy, National Cheng Kung University, Tainan, Taiwan.
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13
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Veit S, Takeda K, Tsunoyama Y, Baymann F, Nevo R, Reich Z, Rögner M, Miki K, Rexroth S. Structural and functional characterisation of the cyanobacterial PetC3 Rieske protein family. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2016; 1857:1879-1891. [DOI: 10.1016/j.bbabio.2016.09.007] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2016] [Revised: 09/12/2016] [Accepted: 09/17/2016] [Indexed: 11/30/2022]
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14
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Hu G, Ji S, Yu Y, Wang S, Zhou G, Li F. Organisms for biofuel production: natural bioresources and methodologies for improving their biosynthetic potentials. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2015; 147:185-224. [PMID: 24085385 DOI: 10.1007/10_2013_245] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
Abstract
In order to relieve the pressure of energy supply and environment contamination that humans are facing, there are now intensive worldwide efforts to explore natural bioresources for production of energy storage compounds, such as lipids, alcohols, hydrocarbons, and polysaccharides. Around the world, many plants have been evaluated and developed as feedstock for bioenergy production, among which several crops have successfully achieved industrialization. Microalgae are another group of photosynthetic autotroph of interest due to their superior growth rates, relatively high photosynthetic conversion efficiencies, and vast metabolic capabilities. Heterotrophic microorganisms, such as yeast and bacteria, can utilize carbohydrates from lignocellulosic biomass directly or after pretreatment and enzymatic hydrolysis to produce liquid biofuels such as ethanol and butanol. Although finding a suitable organism for biofuel production is not easy, many naturally occurring organisms with good traits have recently been obtained. This review mainly focuses on the new organism resources discovered in the last 5 years for production of transport fuels (biodiesel, gasoline, jet fuel, and alkanes) and hydrogen, and available methods to improve natural organisms as platforms for the production of biofuels.
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Affiliation(s)
- Guangrong Hu
- Shandong Provincial Key Laboratory of Energy Genetics, Key Laboratory of Biofuels, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, 266101, China
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Wilken S, Schuurmans JM, Matthijs HCP. Do mixotrophs grow as photoheterotrophs? Photophysiological acclimation of the chrysophyte Ochromonas danica after feeding. THE NEW PHYTOLOGIST 2014; 204:882-889. [PMID: 25138174 DOI: 10.1111/nph.12975] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2014] [Accepted: 06/22/2014] [Indexed: 06/03/2023]
Abstract
Mixotrophy is increasingly recognized as an important and widespread nutritional strategy in various taxonomic groups ranging from protists to higher plants. We hypothesize that the availability of alternative carbon and energy sources during mixotrophy allows a switch to photoheterotrophic growth, where the photosynthetic apparatus mainly provides energy but not fixed carbon. Because such a change in the function of the photosynthetic machinery is probably reflected in its composition, we compared the photosynthetic machinery in Ochromonas danica during autotrophic and mixotrophic growth. Compared with autotrophic growth, the total pigmentation of O. danica was reduced during mixotrophic growth. Furthermore, the photosystem I (PSI):PSII ratio increased, and the cellular content of Rubisco decreased not only absolutely, but also relative to the content of PSII. The changing composition of the photosynthetic apparatus indicates a shift in its function from providing both carbon and energy during photoautotrophy to mainly providing energy during mixotrophy. This preference for photoheterotrophic growth has interesting implications for the contribution of mixotrophic species to carbon cycling in diverse ecosystems.
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Affiliation(s)
- Susanne Wilken
- Department of Aquatic Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB, Wageningen, the Netherlands; Monterey Bay Aquarium Research Institute (MBARI), 7700 Sandholdt Road, Moss Landing, CA, 95039-0628, USA
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Kirst H, Formighieri C, Melis A. Maximizing photosynthetic efficiency and culture productivity in cyanobacteria upon minimizing the phycobilisome light-harvesting antenna size. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2014; 1837:1653-64. [PMID: 25046143 DOI: 10.1016/j.bbabio.2014.07.009] [Citation(s) in RCA: 115] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 04/14/2014] [Revised: 07/03/2014] [Accepted: 07/10/2014] [Indexed: 12/25/2022]
Abstract
A phycocyanin-deletion mutant of Synechocystis (cyanobacteria) was generated upon replacement of the CPC-operon with a kanamycin resistance cassette. The Δcpc transformant strains (Δcpc) exhibited a green phenotype, compared to the blue-green of the wild type (WT), lacked the distinct phycocyanin absorbance at 625nm, and had a lower Chl per cell content and a lower PSI/PSII reaction center ratio compared to the WT. Molecular and genetic analyses showed replacement of all WT copies of the Synechocystis DNA with the transgenic version, thereby achieving genomic DNA homoplasmy. Biochemical analyses showed the absence of the phycocyanin α- and β-subunits, and the overexpression of the kanamycin resistance NPTI protein in the Δcpc. Physiological analyses revealed a higher, by a factor of about 2, intensity for the saturation of photosynthesis in the Δcpc compared to the WT. Under limiting intensities of illumination, growth of the Δcpc was slower than that of the WT. This difference in the rate of cell duplication diminished gradually as growth irradiance increased. Identical rates of cell duplication of about 13h for both WT and Δcpc were observed at about 800μmolphotonsm(-2)s(-1) or greater. Culture productivity analyses under simulated bright sunlight and high cell-density conditions showed that biomass accumulation by the Δcpc was 1.57-times greater than that achieved by the WT. Thus, the work provides first-time direct evidence of the applicability of the Truncated Light-harvesting Antenna (TLA)-concept in cyanobacteria, entailing substantial improvements in the photosynthetic efficiency and productivity of mass cultures upon minimizing the phycobilisome light-harvesting antenna size.
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Affiliation(s)
- Henning Kirst
- Department of Plant & Microbial Biology, University of California, Berkeley, CA 94720-3102, USA
| | - Cinzia Formighieri
- Department of Plant & Microbial Biology, University of California, Berkeley, CA 94720-3102, USA
| | - Anastasios Melis
- Department of Plant & Microbial Biology, University of California, Berkeley, CA 94720-3102, USA.
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Leganés F, Martínez-Granero F, Muñoz-Martín MÁ, Marco E, Jorge A, Carvajal L, Vida T, González-Pleiter M, Fernández-Piñas F. Characterization and responses to environmental cues of a photosynthetic antenna-deficient mutant of the filamentous cyanobacterium Anabaena sp. PCC 7120. JOURNAL OF PLANT PHYSIOLOGY 2014; 171:915-926. [PMID: 24913049 DOI: 10.1016/j.jplph.2014.03.005] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2013] [Revised: 03/19/2014] [Accepted: 03/19/2014] [Indexed: 06/03/2023]
Abstract
The cyanobacterial phycobilisome (PBS) is a giant pigment-protein complex which harvests light energy for photosynthesis and comprises two structures: a core and peripheral rods. Most studies on PBS structure and function are based on mutants of unicellular strains. In this report, we describe the phenotypic and genetic characterization of a transposon mutant of the filamentous Anabaena sp. strain PCC 7120, denoted LC1, which cannot synthesize the phycobiliprotein phycocyanin (PC), the main component of the rods; in this mutant, the transposon had inserted into the cpcB gene (orf alr0528) which putatively encodes PC-β chain. Mutant LC1 was able to synthesize phycoerythrocyanin (PEC), a phycobiliprotein (PBP) located at the terminal region of the rods; but in the absence of PC, PEC did not attach to the PBSs that only retained the allophycocyanin (APC) core; ferredoxin: NADP+-oxidoreductase (FNR) that is associated with the PBS in the wild type, was not found in isolated PBSs from LC1. The performance of the mutant exposed to different environmental conditions was evaluated. The mutant phenotype was successfully complemented by cloning and transfer of the wild type complete cpc operon to mutant LC1. Interestingly, LC1 compensated its mutation by significantly increasing the number of its core-PBS and the effective quantum yield of photosystem II (PSII) photochemistry; this feature suggests a more efficient energy conversion in the mutant which may be useful for biotechnological applications.
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Affiliation(s)
- Francisco Leganés
- Departamento de Biología, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid 28049, Spain
| | | | - M Ángeles Muñoz-Martín
- Departamento de Biología, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid 28049, Spain
| | - Eduardo Marco
- Departamento de Biología, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid 28049, Spain
| | - Alberto Jorge
- Departamento de Biología, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid 28049, Spain
| | - Laura Carvajal
- Departamento de Biología, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid 28049, Spain
| | - Teresa Vida
- Departamento de Biología, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid 28049, Spain
| | - Miguel González-Pleiter
- Departamento de Biología, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid 28049, Spain
| | - Francisca Fernández-Piñas
- Departamento de Biología, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid 28049, Spain.
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Lea-Smith DJ, Bombelli P, Dennis JS, Scott SA, Smith AG, Howe CJ. Phycobilisome-Deficient Strains of Synechocystis sp. PCC 6803 Have Reduced Size and Require Carbon-Limiting Conditions to Exhibit Enhanced Productivity. PLANT PHYSIOLOGY 2014; 165:705-714. [PMID: 24760817 PMCID: PMC4044857 DOI: 10.1104/pp.114.237206] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2014] [Accepted: 04/17/2014] [Indexed: 05/21/2023]
Abstract
Reducing excessive light harvesting in photosynthetic organisms may increase biomass yields by limiting photoinhibition and increasing light penetration in dense cultures. The cyanobacterium Synechocystis sp. PCC 6803 harvests light via the phycobilisome, which consists of an allophycocyanin core and six radiating rods, each with three phycocyanin (PC) discs. Via targeted gene disruption and alterations to the promoter region, three mutants with two (pcpcT→C) and one (ΔCpcC1C2:pcpcT→C) PC discs per rod or lacking PC (olive) were generated. Photoinhibition and chlorophyll levels decreased upon phycobilisome reduction, although greater penetration of white light was observed only in the PC-deficient mutant. In all strains cultured at high cell densities, most light was absorbed by the first 2 cm of the culture. Photosynthesis and respiration rates were also reduced in the ΔCpcC1C2:pcpcT→C and olive mutants. Cell size was smaller in the pcpcT→C and olive strains. Growth and biomass accumulation were similar between the wild-type and pcpcT→C under a variety of conditions. Growth and biomass accumulation of the olive mutant were poorer in carbon-saturated cultures but improved in carbon-limited cultures at higher light intensities, as they did in the ΔCpcC1C2:pcpcT→C mutant. This study shows that one PC disc per rod is sufficient for maximal light harvesting and biomass accumulation, except under conditions of high light and carbon limitation, and two or more are sufficient for maximal oxygen evolution. To our knowledge, this study is the first to measure light penetration in bulk cultures of cyanobacteria and offers important insights into photobioreactor design.
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Affiliation(s)
- David J Lea-Smith
- Department of Biochemistry, University of Cambridge, Cambridge CB2 1QW, United Kingdom (D.J.L.-S., P.B., C.J.H.);Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB2 3RA, United Kingdom (J.S.D.);Department of Engineering, University of Cambridge, Cambridge CB2 1PZ, United Kingdom (S.A.S.); andDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom (A.G.S.)
| | - Paolo Bombelli
- Department of Biochemistry, University of Cambridge, Cambridge CB2 1QW, United Kingdom (D.J.L.-S., P.B., C.J.H.);Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB2 3RA, United Kingdom (J.S.D.);Department of Engineering, University of Cambridge, Cambridge CB2 1PZ, United Kingdom (S.A.S.); andDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom (A.G.S.)
| | - John S Dennis
- Department of Biochemistry, University of Cambridge, Cambridge CB2 1QW, United Kingdom (D.J.L.-S., P.B., C.J.H.);Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB2 3RA, United Kingdom (J.S.D.);Department of Engineering, University of Cambridge, Cambridge CB2 1PZ, United Kingdom (S.A.S.); andDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom (A.G.S.)
| | - Stuart A Scott
- Department of Biochemistry, University of Cambridge, Cambridge CB2 1QW, United Kingdom (D.J.L.-S., P.B., C.J.H.);Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB2 3RA, United Kingdom (J.S.D.);Department of Engineering, University of Cambridge, Cambridge CB2 1PZ, United Kingdom (S.A.S.); andDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom (A.G.S.)
| | - Alison G Smith
- Department of Biochemistry, University of Cambridge, Cambridge CB2 1QW, United Kingdom (D.J.L.-S., P.B., C.J.H.);Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB2 3RA, United Kingdom (J.S.D.);Department of Engineering, University of Cambridge, Cambridge CB2 1PZ, United Kingdom (S.A.S.); andDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom (A.G.S.)
| | - Christopher J Howe
- Department of Biochemistry, University of Cambridge, Cambridge CB2 1QW, United Kingdom (D.J.L.-S., P.B., C.J.H.);Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB2 3RA, United Kingdom (J.S.D.);Department of Engineering, University of Cambridge, Cambridge CB2 1PZ, United Kingdom (S.A.S.); andDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom (A.G.S.)
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19
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Metabolic engineering of cyanobacteria for the production of hydrogen from water. Biochem Soc Trans 2014; 41:1254-9. [PMID: 24059516 DOI: 10.1042/bst20130122] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Requirements concerning the construction of a minimal photosynthetic design cell with direct coupling of water-splitting photosynthesis and H2 production are discussed in the present paper. Starting from a cyanobacterial model cell, Synechocystis PCC 6803, potentials and possible limitations are outlined and realization strategies are presented. In extension, the limits of efficiency of all major biological components can be approached in a semi-artificial system consisting of two electrochemically coupled half-cells without the physiological constraints of a living cell.
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Schwarzkopf M, Yoo YC, Hückelhoven R, Park YM, Proels RK. Cyanobacterial phytochrome2 regulates the heterotrophic metabolism and has a function in the heat and high-light stress response. PLANT PHYSIOLOGY 2014; 164:2157-2166. [PMID: 24578507 PMCID: PMC3982769 DOI: 10.1104/pp.113.233270] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
Cyanobacteria combine the photosynthetic and respiratory electron transport in one membrane system, the thylakoid membrane. This feature requires an elaborate regulation mechanism to maintain a certain redox status of the electron transport chain, hence allowing proper photosynthetic and respiratory energy metabolism. In this context, metabolic adaptations, as seen in the light-to-dark and dark-to-light transitions, are particularly challenging. However, the molecular basis of the underlying regulatory mechanisms is not well-understood. Here, we describe a function of cyanobacterial phytochrome2 (Cph2), a phytochrome of the cyanobacterial model system Synechocystis sp. PCC 6803, in regulation of the primary energy metabolism. When cells are shifted from photoautotrophic planktonic growth to light-activated heterotrophic growth and biofilm initiation, knockout of Cph2 results in impaired growth, a decrease in the activity of Glc-6-P dehydrogenase, a decrease of the transcript abundance/activity of cytochrome-c-oxidase, and slower phycocyanin degradation. Measurements of the plastoquinone reduction confirm an impaired heterotrophic metabolism in the cph2 knockout. When cells that were adapted to heterotrophic metabolism are shifted back to light conditions, the knockout of Cph2 results in an altered photosystem II chlorophyll fluorescence induction curve, which is indicative of an impaired redox balance of the electron transport chain. Moreover, Cph2 plays a role in the heat and high-light stress response, particularly under photomixotrophic conditions. Our results show a function of Cph2 in the adaptation of the primary energy metabolism to changing trophic conditions. The physiological role of Cph2 in biofilm formation is discussed.
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Affiliation(s)
- Manti Schwarzkopf
- Lehrstuhl für Phytopathologie, Technische Universität München, D-85350 Freising-Weihenstephan, Germany
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21
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Increased biomass production and glycogen accumulation in apcE gene deleted Synechocystis sp. PCC 6803. AMB Express 2014; 4:17. [PMID: 24949254 PMCID: PMC4052703 DOI: 10.1186/s13568-014-0017-z] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2014] [Accepted: 02/18/2014] [Indexed: 01/14/2023] Open
Abstract
The effect of phycobilisome antenna-truncation in the cyanobacterium Synechocystis sp. PCC 6803 on biomass production and glycogen accumulation have not yet been fully clarified. To investigate these effects here, the apcE gene, which encodes the anchor protein linking the phycobilisome to the thylakoid membrane, was deleted in a glucose tolerant strain of Synechocystis sp. PCC 6803. Biomass production of the apcE-deleted strain under photoautotrophic and atmospheric air conditions was 1.6 times higher than that of strain PCC 6803 (1.32 ± 0.01 versus 0.84 ± 0.07 g cell-dry weight L(-1), respectively) after 15 days of cultivation. In addition, the glycogen content of the apcE-deleted strain (24.2 ± 0.7%) was also higher than that of strain PCC 6803 (11.1 ± 0.3%). Together, these results demonstrate that antenna truncation by deleting the apcE gene was effective for increasing biomass production and glycogen accumulation under photoautotrophic and atmospheric air conditions in Synechocystis sp. PCC 6803.
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Barthel S, Bernát G, Seidel T, Rupprecht E, Kahmann U, Schneider D. Thylakoid membrane maturation and PSII activation are linked in greening Synechocystis sp. PCC 6803 cells. PLANT PHYSIOLOGY 2013; 163:1037-46. [PMID: 23922268 PMCID: PMC3793023 DOI: 10.1104/pp.113.224428] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
Thylakoid membranes are typical and essential features of both chloroplasts and cyanobacteria. While they are crucial for phototrophic growth of cyanobacterial cells, biogenesis of thylakoid membranes is not well understood yet. Dark-grown Synechocystis sp. PCC 6803 cells contain only rudimentary thylakoid membranes but still a relatively high amount of phycobilisomes, inactive photosystem II and active photosystem I centers. After shifting dark-grown Synechocystis sp. PCC 6803 cells into the light, "greening" of Synechocystis sp. PCC 6803 cells, i.e. thylakoid membrane formation and recovery of photosynthetic electron transport reactions, was monitored. Complete restoration of a typical thylakoid membrane system was observed within 24 hours after an initial lag phase of 6 to 8 hours. Furthermore, activation of photosystem II complexes and restoration of a functional photosynthetic electron transport chain appears to be linked to the biogenesis of organized thylakoid membrane pairs.
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Fluorescence quenching of the phycobilisome terminal emitter LCM from the cyanobacterium Synechocystis sp. PCC 6803 detected in vivo and in vitro. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2013; 125:137-45. [DOI: 10.1016/j.jphotobiol.2013.05.014] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2013] [Revised: 05/30/2013] [Accepted: 05/30/2013] [Indexed: 11/21/2022]
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Kwon JH, Bernát G, Wagner H, Rögner M, Rexroth S. Reduced light-harvesting antenna: Consequences on cyanobacterial metabolism and photosynthetic productivity. ALGAL RES 2013. [DOI: 10.1016/j.algal.2013.04.008] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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25
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Tamary E, Kiss V, Nevo R, Adam Z, Bernát G, Rexroth S, Rögner M, Reich Z. Structural and functional alterations of cyanobacterial phycobilisomes induced by high-light stress. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2011; 1817:319-27. [PMID: 22138629 DOI: 10.1016/j.bbabio.2011.11.008] [Citation(s) in RCA: 61] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2011] [Revised: 11/06/2011] [Accepted: 11/09/2011] [Indexed: 11/18/2022]
Abstract
Exposure of cyanobacterial or red algal cells to high light has been proposed to lead to excitonic decoupling of the phycobilisome antennae (PBSs) from the reaction centers. Here we show that excitonic decoupling of PBSs of Synechocystis sp. PCC 6803 is induced by strong light at wavelengths that excite either phycobilin or chlorophyll pigments. We further show that decoupling is generally followed by disassembly of the antenna complexes and/or their detachment from the thylakoid membrane. Based on a previously proposed mechanism, we suggest that local heat transients generated in the PBSs by non-radiative energy dissipation lead to alterations in thermo-labile elements, likely in certain rod and core linker polypeptides. These alterations disrupt the transfer of excitation energy within and from the PBSs and destabilize the antenna complexes and/or promote their dissociation from the reaction centers and from the thylakoid membranes. Possible implications of the aforementioned alterations to adaptation of cyanobacteria to light and other environmental stresses are discussed.
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Affiliation(s)
- Eyal Tamary
- Department of Biological Chemistry, Weizmann Institute of Science, Rehovot, Israel
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26
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Pietsch D, Bernát G, Kahmann U, Staiger D, Pistorius EK, Michel KP. New insights into the function of the iron deficiency-induced protein C from Synechococcus elongatus PCC 7942. PHOTOSYNTHESIS RESEARCH 2011; 108:121-132. [PMID: 21607697 DOI: 10.1007/s11120-011-9661-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2011] [Accepted: 05/11/2011] [Indexed: 05/30/2023]
Abstract
Iron limitation has a strong impact on electron transport reactions of the unicellular fresh water cyanobacterium Synechococcus elongatus PCC 7942 (thereafter referred to as S. elongatus). Among the various adaptational processes on different cellular levels, iron limitation induces a strongly enhanced expression of IdiC (iron-deficiency-induced protein C). In this article, we show that IdiC is loosely attached to the thylakoid and to the cytoplasmic membranes and that its expression is enhanced during conditions of iron starvation and during the late growth phase. The intracellular IdiC level was even more increased when additional iron was replenished in the late growth phase. On the basis of its amino acid sequence and of its absorbance spectrum, IdiC can be classified as a member of the family of thioredoxin (TRX)-like (2Fe-2S) ferredoxins. The presence of an iron cofactor in IdiC was detected by inductive coupled plasma optical emission spectrometry (ICP-OES). Comparative measurements of electron transport activities of S. elongatus wild type (WT) and an IdiC-merodiploid mutant called MuD, which contained a strongly reduced IdiC content under iron-sufficient as well as iron-deficient growth conditions, were performed. The results revealed that MuD had a strongly increased light sensitivity, especially under iron limitation. The measurements of photosystem II (PS II)-mediated electron transport rates in WT and MuD strain showed that PS II activity was significantly lower in MuD than in the WT strain. Moreover, P(700) (+) re-reduction rates provided evidence that the respiratory activities, which were very low in the MuD strain in the presence of iron, significantly increased in iron-starved cells. Thus, an increase in respiration may compensate for the drastic decrease of photosynthetic electron transport activity in MuD grown under iron starvation. Based on the similarity of the S. elongatus IdiC to the NuoE subunit of the NDH-1 complex in Escherichia coli, it is likely that IdiC has a function in the electron transport processes from NAD(P)H to the plastoquinone pool. This is in agreement with the up-regulation of IdiC in the late growth phase as well as under stress conditions when PS II is damaged. As absence or high reduction of the IdiC level would prevent or reduce the formation of functional NDH-1 complexes, under such conditions electron transport routes via alternative substrate dehydrogenases, donating electrons to the plastoquinone pool, can be assumed to be up-regulated.
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Affiliation(s)
- Daniel Pietsch
- Lehrstuhl für Molekulare Zellphysiologie, Fakultät für Biologie, Universität Bielefeld, Universitätsstraße 25, 33615, Bielefeld, Germany
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Imashimizu M, Bernát G, Sunamura EI, Broekmans M, Konno H, Isato K, Rögner M, Hisabori T. Regulation of F0F1-ATPase from Synechocystis sp. PCC 6803 by γ and ∈ Subunits Is Significant for Light/Dark Adaptation. J Biol Chem 2011; 286:26595-602. [DOI: 10.1074/jbc.m111.234138] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
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Bothe H, Schmitz O, Yates MG, Newton WE. Nitrogen fixation and hydrogen metabolism in cyanobacteria. Microbiol Mol Biol Rev 2010; 74:529-51. [PMID: 21119016 PMCID: PMC3008169 DOI: 10.1128/mmbr.00033-10] [Citation(s) in RCA: 174] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
This review summarizes recent aspects of (di)nitrogen fixation and (di)hydrogen metabolism, with emphasis on cyanobacteria. These organisms possess several types of the enzyme complexes catalyzing N(2) fixation and/or H(2) formation or oxidation, namely, two Mo nitrogenases, a V nitrogenase, and two hydrogenases. The two cyanobacterial Ni hydrogenases are differentiated as either uptake or bidirectional hydrogenases. The different forms of both the nitrogenases and hydrogenases are encoded by different sets of genes, and their organization on the chromosome can vary from one cyanobacterium to another. Factors regulating the expression of these genes are emerging from recent studies. New ideas on the potential physiological and ecological roles of nitrogenases and hydrogenases are presented. There is a renewed interest in exploiting cyanobacteria in solar energy conversion programs to generate H(2) as a source of combustible energy. To enhance the rates of H(2) production, the emphasis perhaps needs not to be on more efficient hydrogenases and nitrogenases or on the transfer of foreign enzymes into cyanobacteria. A likely better strategy is to exploit the use of radiant solar energy by the photosynthetic electron transport system to enhance the rates of H(2) formation and so improve the chances of utilizing cyanobacteria as a source for the generation of clean energy.
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Affiliation(s)
- Hermann Bothe
- Botanical Institute, The University of Cologne, Zülpicher Str. 47b, D-50923 Cologne, Germany.
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Distinct roles of multiple NDH-1 complexes in the cyanobacterial electron transport network as revealed by kinetic analysis of P700+ reduction in various Ndh-deficient mutants of Synechocystis sp. strain PCC6803. J Bacteriol 2010; 193:292-5. [PMID: 21036997 DOI: 10.1128/jb.00984-10] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
While methyl viologen had only a small effect on P700(+) rereduction kinetics after far-red pulses in KCN-treated wild-type Synechocystis sp. strain PCC6803 and an NdhF3/NdhF4 (NdhF3/F4)-defective mutant, it involved a rather slow P700(+) rereduction in an NdhF1-defective mutant. This strongly indicates that (i) active electron flow from metabolites to plastoquinone is suppressed upon deletion of ndhF1 and (ii) photosystem 1-mediated cyclic electron transport is dependent on NdhF3/F4-type NDH-1 complexes.
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Allakhverdiev SI, Thavasi V, Kreslavski VD, Zharmukhamedov SK, Klimov VV, Ramakrishna S, Los DA, Mimuro M, Nishihara H, Carpentier R. Photosynthetic hydrogen production. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS 2010. [DOI: 10.1016/j.jphotochemrev.2010.07.002] [Citation(s) in RCA: 88] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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Hydrogen production by the unicellular, diazotrophic cyanobacterium Cyanothece sp. strain ATCC 51142 under conditions of continuous light. Appl Environ Microbiol 2010; 76:4293-301. [PMID: 20453150 DOI: 10.1128/aem.00146-10] [Citation(s) in RCA: 63] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
We report on the hydrogen production properties of the unicellular, diazotrophic cyanobacterium Cyanothece sp. strain ATCC 51142. This organism has a versatile metabolism and can grow in the presence or absence of combined nitrogen and can grow photosynthetically or mixotrophically and heterotrophically in the presence of glycerol. The strain produces a bidirectional hydrogenase (encoded by the hox genes), an uptake hydrogenase (hupLS), and nitrogenase (nifHDK). We demonstrated hydrogen production by both the hydrogenase and the nitrogenase under appropriate metabolic conditions. The highest rates of hydrogen production were produced under nitrogen-fixing conditions when cells were grown and incubated under continuous light conditions, in either the presence or absence of glycerol. Under such nitrogen-fixing conditions, we have achieved rates of 300 micromol H(2)/mg chloramphenicol (Chl)/hr during the first 24 h of incubation. The levels of H(2) measured were dependent upon the incubation conditions, such as sparging with argon, which generated anaerobic conditions. We demonstrated that the same conditions led to high levels of H(2) production and N(2) fixation, indicating that low-oxygen conditions favor nitrogenase activity for both processes. The levels of hydrogen produced by the hydrogenase are much lower, typically 5 to 10 micromol H(2)/mg Chl/hr. Hydrogenase activity was dependent upon electron transport through photosystem II (PS II), whereas nitrogenase activity was more dependent on PS I, as well as on respiration. Although cells do not double under the incubation conditions when sparged with argon to provide a low-oxygen environment, the cells are metabolically active, and hydrogen production can be inhibited by the addition of chloramphenicol to inhibit protein synthesis.
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Feng X, Bandyopadhyay A, Berla B, Page L, Wu B, Pakrasi HB, Tang YJ. Mixotrophic and photoheterotrophic metabolism in Cyanothece sp. ATCC 51142 under continuous light. MICROBIOLOGY-SGM 2010; 156:2566-2574. [PMID: 20430816 DOI: 10.1099/mic.0.038232-0] [Citation(s) in RCA: 70] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The unicellular diazotrophic cyanobacterium Cyanothece sp. ATCC 51142 (Cyanothece 51142) is able to grow aerobically under nitrogen-fixing conditions with alternating light-dark cycles or continuous illumination. This study investigated the effects of carbon and nitrogen sources on Cyanothece 51142 metabolism via (13)C-assisted metabolite analysis and biochemical measurements. Under continuous light (50 mumol photons m(-2) s(-1)) and nitrogen-fixing conditions, we found that glycerol addition promoted aerobic biomass growth (by twofold) and nitrogenase-dependent hydrogen production [up to 25 mumol H(2) (mg chlorophyll)( -1) h(-1)], but strongly reduced phototrophic CO(2) utilization. Under nitrogen-sufficient conditions, Cyanothece 51142 was able to metabolize glycerol photoheterotrophically, and the activity of light-dependent reactions (e.g. oxygen evolution) was not significantly reduced. In contrast, Synechocystis sp. PCC 6803 showed apparent mixotrophic metabolism under similar growth conditions. Isotopomer analysis also detected that Cyanothece 51142 was able to fix CO(2) via anaplerotic pathways, and to take up glucose and pyruvate for mixotrophic biomass synthesis.
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Affiliation(s)
- Xueyang Feng
- Department of Energy, Environmental and Chemical Engineering, Washington University, St Louis, MO 63130, USA
| | | | - Bert Berla
- Department of Energy, Environmental and Chemical Engineering, Washington University, St Louis, MO 63130, USA
| | - Lawrence Page
- Department of Biology, Washington University, St Louis, MO 63130, USA
| | - Bing Wu
- Department of Energy, Environmental and Chemical Engineering, Washington University, St Louis, MO 63130, USA
| | - Himadri B Pakrasi
- Department of Biology, Washington University, St Louis, MO 63130, USA.,Department of Energy, Environmental and Chemical Engineering, Washington University, St Louis, MO 63130, USA
| | - Yinjie J Tang
- Department of Energy, Environmental and Chemical Engineering, Washington University, St Louis, MO 63130, USA
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Tsunoyama Y, Bernát G, Dyczmons NG, Schneider D, Rögner M. Multiple Rieske proteins enable short- and long-term light adaptation of Synechocystis sp. PCC 6803. J Biol Chem 2009; 284:27875-27883. [PMID: 19674969 PMCID: PMC2788838 DOI: 10.1074/jbc.m109.011189] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2009] [Revised: 08/12/2009] [Indexed: 11/06/2022] Open
Abstract
In contrast to eukaryotes, most cyanobacteria contain several isoforms of the Rieske iron-sulfur protein, PetC, resulting in heterogeneity in the composition of the cytochrome b(6)f complexes. Of three isoforms in the mesophilic cyanobacterium Synechocystis PCC 6803, PetC1 is the major Rieske protein in the cytochrome b(6)f complex, whereas the physiological function of PetC2 and PetC3 is still uncertain. Comparison of wild type and various petC-deficient strains under selected light conditions revealed distinct functional differences: high-light exposure of wild type cells resulted in a significantly enhanced petC2 transcript level, whereas a Delta petC1 mutant showed a low cytochrome b(6)f content, low electron flux, and a considerably increased accumulation of cytochrome-bd oxidase. In contrast to wild type and Delta petC1, Delta petC2 and Delta petC3 strains still grew fast under high-light conditions although all three Rieske proteins are required for maximal electron transport rates. Although the presence of PetC3 appears to be required for activation of the cyclic electron transport, state transitions were more effective in the absence of PetC2 and/or PetC3. In summary, our data suggest defined roles of the various PetC proteins in short- and long-term light adaptation.
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Affiliation(s)
- Yuichi Tsunoyama
- Department of Plant Biochemistry, Ruhr-University Bochum, 44780 Bochum, Germany; Division of Biology, Radioisotope Research Center, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan
| | - Gábor Bernát
- Department of Plant Biochemistry, Ruhr-University Bochum, 44780 Bochum, Germany
| | - Nina G Dyczmons
- Department of Plant Biochemistry, Ruhr-University Bochum, 44780 Bochum, Germany
| | - Dirk Schneider
- Department of Biochemistry and Molecular Biology, ZBMZ, Albert-Ludwigs-University Freiburg, 79104 Freiburg, Germany
| | - Matthias Rögner
- Department of Plant Biochemistry, Ruhr-University Bochum, 44780 Bochum, Germany.
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