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Zabelin AA, Kovalev VB, Khristin AM, Khatypov RA, Shkuropatov AY. Primary charge separation in Chloroflexus aurantiacus reaction centers at room temperature: ultrafast transient absorption measurements on Q A-depleted preparations with native and chemically modified bacteriopheophytin composition. PHOTOSYNTHESIS RESEARCH 2025; 163:2. [PMID: 39699716 DOI: 10.1007/s11120-024-01122-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2024] [Accepted: 11/27/2024] [Indexed: 12/20/2024]
Abstract
The initial electron transfer (ET) processes in reaction centers (RCs) of Chloroflexus (Cfl.) aurantiacus were studied at 295 K using femtosecond transient absorption (TA) difference spectroscopy. Particular attention was paid to the decay kinetics of the primary electron donor excited state (P*) and the formation/decay of the absorption band of the monomeric bacteriochlorophyll a anion (BA-) at ~ 1035 nm, which reflects the dynamics of the charge-separated state P+BA-. It was found that in QA-depleted RCs containing native bacteriopheophytin a (BPheo) molecules at the HA and HB binding sites, the decay of P* to form the P+HA- state contains a fast (4 ps; relative amplitude 70%) and a slow (13 ps; relative amplitude 30%) kinetic components. The BA- absorption band at ~ 1035 nm was detected only for the fast component. Based on global analysis of the TA data, the results are discussed in terms of the presence of two P* populations: in one, P* decays in 4 ps via a dominant two-step activationless P* → P+BA- → P+HA- ET with a contribution of 70% to the overall primary charge separation process, and in the other, P* decays in 13 ps via a one-step superexchange P* → P+HA- ET (contribution of 30%). Similar femtosecond TA measurements on QA-depleted-PheoA-modified RCs, in which the charge separation energetics was changed by replacing BPheo HA with plant pheophytin a, suggest the presence of a P* population where P+HA- formation can occur via a thermally activated two-step ET process.
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Affiliation(s)
- Alexey A Zabelin
- Institute of Basic Biological Problems of the Russian Academy of Sciences, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", Pushchino, Moscow Region, 142290, Russian Federation
| | - Vyacheslav B Kovalev
- Institute of Basic Biological Problems of the Russian Academy of Sciences, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", Pushchino, Moscow Region, 142290, Russian Federation
| | - Anton M Khristin
- Institute of Basic Biological Problems of the Russian Academy of Sciences, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", Pushchino, Moscow Region, 142290, Russian Federation
| | - Ravil A Khatypov
- Institute of Basic Biological Problems of the Russian Academy of Sciences, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", Pushchino, Moscow Region, 142290, Russian Federation
| | - Anatoly Ya Shkuropatov
- Institute of Basic Biological Problems of the Russian Academy of Sciences, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", Pushchino, Moscow Region, 142290, Russian Federation.
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Yakovlev AG, Taisova AS. Downhill excitation energy flow in reaction centers of purple bacteria Rhodospirillum rubrum G9. BIOCHIMICA ET BIOPHYSICA ACTA. BIOENERGETICS 2024; 1865:149499. [PMID: 39069149 DOI: 10.1016/j.bbabio.2024.149499] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2024] [Revised: 07/24/2024] [Accepted: 07/24/2024] [Indexed: 07/30/2024]
Abstract
Using femtosecond differential spectroscopy, excitation energy transfer in reaction centers (RCs) of the carotenoidless strain of purple bacteria Rhodospirillum rubrum G9 was studied at room temperature. Excitation and probing of the Qy, Qx and Soret absorption bands of the RCs were carried out by pulses with duration of 25-30 fs. Modeling of ΔA (light - dark) kinetics made it possible to estimate the characteristic time of various stages of excitation energy transformation. It is shown that the dynamics of the downhill energy flow in the RCs is determined both by the internal energy conversion Soret→ Qx → Qy in each cofactor and by the energy transfer H* → B* → P* (H - bacteriopheophytin, B - bacteriochlorophyll a, P - bacteriochlorophyll a dimer) between cofactors. The transfer of energy between the upper excited levels (Soret and Qx) of the cofactors accelerates its arrival to the lower exciton level of the P, from where charge separation begins. It turned out that all conversion and energy transfer processes occur within 40-160 fs: the conversion Soret → Qx occurs in 40-50 fs, the conversion Qx → Qy occurs in 100-140 fs, the transfer H* → B* has a time constant of 80-120 fs, and the transfer B* → P* has a time constant of 130-160 fs. The rate of energy transfer between the upper excited levels is close to the rate of transfer between Qy levels.
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Affiliation(s)
- Andrei G Yakovlev
- Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, Leninskie Gory, 119991 Moscow, Russian Federation.
| | - Alexandra S Taisova
- Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, Leninskie Gory, 119991 Moscow, Russian Federation
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Khristin AM, Fufina TY, Khatypov RA. Femtosecond Dynamics of the Excited Primary Electron Donor in Reaction Centers of the Purple Bacterium Rhodobacter sphaeroides. BIOCHEMISTRY. BIOKHIMIIA 2024; 89:1313-1324. [PMID: 39218027 DOI: 10.1134/s0006297924070125] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Revised: 06/03/2024] [Accepted: 06/06/2024] [Indexed: 09/04/2024]
Abstract
Femtosecond transient absorption spectroscopy was used to study the dynamics of the excited primary electron donor in the reaction centers of the purple bacterium Rhodobacter sphaeroides. Using global analysis and the interval method, we found a correlation between the vibrational coherence damping of the excited primary electron donor and the lifetime of the charge-separated state P+BA-, indicating the reversibility of electron transfer to the primary electron acceptor, the BA molecule. In the reaction centers, the signs of superposition of two electronic states of P were found for a delay time of less than 200 fs. It is suggested that the admixture value of the charge transfer state PA+PB- with the excited primary electron donor P* is about 24%. The results obtained are discussed in terms of the two-step electron transfer mechanism.
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Affiliation(s)
- Anton M Khristin
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino Scientific Center for Biological Research, Russian Academy of Sciences, Pushchino, Moscow Region, 142290, Russia
| | - Tatyana Yu Fufina
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino Scientific Center for Biological Research, Russian Academy of Sciences, Pushchino, Moscow Region, 142290, Russia
| | - Ravil A Khatypov
- Institute of Basic Biological Problems, Russian Academy of Sciences, Pushchino Scientific Center for Biological Research, Russian Academy of Sciences, Pushchino, Moscow Region, 142290, Russia.
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Zabelin AA, Khristin AM, Kovalev VB, Khatypov RA, Shkuropatov AY. Primary charge separation in native and plant pheophytin a-modified reaction centers of Chloroflexus aurantiacus: Ultrafast transient absorption measurements at low temperature. BIOCHIMICA ET BIOPHYSICA ACTA. BIOENERGETICS 2023; 1864:148976. [PMID: 37061174 DOI: 10.1016/j.bbabio.2023.148976] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Revised: 03/31/2023] [Accepted: 04/06/2023] [Indexed: 04/17/2023]
Abstract
Ultrafast transient absorption (TA) spectroscopy was used to study electron transfer (ET) at 100 K in native (as isolated) reaction centers (RCs) of the green filamentous photosynthetic bacterium Chloroflexus (Cfl.) aurantiacus. The rise and decay of the 1028 nm anion absorption band of the monomeric bacteriochlorophyll a molecule at the BA binding site were monitored as indicators of the formation and decay of the P+BA- state, respectively (P is the primary electron donor, a dimer of bacteriochlorophyll a molecules). Global analysis of the TA data indicated the presence of at least two populations of the P⁎ excited state, which decay by distinct means, forming the state P+HA- (HA is a photochemically active bacteriopheophytin a molecule). In one population (~65 %), P⁎ decays in ~2 ps with the formation of P+HA- via a short-lived P+BA- intermediate in a two-step ET process P⁎ → P+BA- → P+HA-. In another population (~35 %), P⁎ decays in ~20 ps to form P+HA- via a superexchange mechanism without producing measurable amounts of P+BA-. Similar TA measurements performed on chemically modified RCs of Cfl. aurantiacus containing plant pheophytin a at the HA binding site also showed the presence of two P⁎ populations (~2 and ~20 ps), with P⁎ decaying through P+BA- only in the ~2 ps population. At 100 K, the quantum yield of primary charge separation in native RCs is determined to be close to unity. The results are discussed in terms of involving a one-step P⁎ → P+HA- superexchange process as an alternative highly efficient ET pathway in Cfl. aurantiacus RCs.
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Affiliation(s)
- Alexey A Zabelin
- Institute of Basic Biological Problems of the Russian Academy of Sciences, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", 142290 Pushchino, Moscow Region, Russian Federation
| | - Anton M Khristin
- Institute of Basic Biological Problems of the Russian Academy of Sciences, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", 142290 Pushchino, Moscow Region, Russian Federation
| | - Vyacheslav B Kovalev
- Institute of Basic Biological Problems of the Russian Academy of Sciences, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", 142290 Pushchino, Moscow Region, Russian Federation
| | - Ravil A Khatypov
- Institute of Basic Biological Problems of the Russian Academy of Sciences, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", 142290 Pushchino, Moscow Region, Russian Federation
| | - Anatoly Yu Shkuropatov
- Institute of Basic Biological Problems of the Russian Academy of Sciences, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences", 142290 Pushchino, Moscow Region, Russian Federation.
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Parson WW. Dynamics of the Excited State in Photosynthetic Bacterial Reaction Centers. J Phys Chem B 2020; 124:1733-1739. [PMID: 32056431 DOI: 10.1021/acs.jpcb.0c00497] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
In the initial charge-separation reaction of photosynthetic bacterial reaction centers, a dimer of strongly interacting bacteriochlorophylls (P) transfers an electron to a third bacteriochlorophyll (BL). It has been suggested that light first generates an exciton state of the dimer and that an electron then moves from one bacteriochlorophyll to the other within P to form a charge-transfer state (PL+PM-), which passes an electron to BL. This scheme, however, is at odds with the most economical analysis of the spectroscopic properties of the reaction center and particularly with the unusual temperature dependence of the long-wavelength absorption band. The present paper explores this conflict with the aid of a simple model in which exciton and charge-transfer states are coupled to three vibrational modes. It then uses a similar model to show that the main experimental evidence suggesting the formation of PL+PM- as an intermediate could reflect pure dephasing of vibrational modes that modulate stimulated emission.
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Affiliation(s)
- William W Parson
- Department of Biochemistry, University of Washington, Seattle, Washington 98195, United States
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Yakovlev AG, Taisova AS, Shuvalov VA, Fetisova ZG. Ultrafast excited-state dynamics in chlorosomes isolated from the photosynthetic filamentous green bacterium Chloroflexus aurantiacus. PHYSIOLOGIA PLANTARUM 2019; 166:12-21. [PMID: 30499123 DOI: 10.1111/ppl.12887] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Revised: 11/24/2018] [Accepted: 11/26/2018] [Indexed: 06/09/2023]
Abstract
Bacteriochlorophyll (BChl) c pigments in the aggregated state are responsible for efficient light harvesting in chlorosomes of the filamentous anoxygenic photosynthetic bacterium, Chloroflexus (Cfx.) aurantiacus. Absorption of light creates excited states in the BChl c aggregates. After subpicosecond intrachlorosomal energy transfer, redistribution and relaxation, the excitation is transferred to the BChl a complexes and further to reaction centers on the picosecond time scale. In this work, the femtosecond excited state dynamics within BChl c oligomers of isolated Cfx. aurantiacus chlorosomes was studied by double difference pump-probe spectroscopy at room temperature. Difference (Alight - Adark ) spectra corresponding to excitation at 725 nm (blue side of the BChl c absorption band) were compared with those corresponding to excitation at 750 nm (red side of the BChl c absorption band). A very fast (time constant 70 ± 10 fs) rise kinetic component was found in the stimulated emission (SE) upon excitation at 725 nm. This component was absent at 750-nm excitation. These data were explained by the dynamical red shift of the SE due to excited state relaxation. The nature and mechanisms of the ultrafast excited state dynamics in chlorosomal BChl c aggregates are discussed.
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Affiliation(s)
- Andrei G Yakovlev
- Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, 119991, Moscow, Russian Federation
| | - Alexandra S Taisova
- Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, 119991, Moscow, Russian Federation
| | - Vladimir A Shuvalov
- Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, 119991, Moscow, Russian Federation
- Institute of Basic Biological Problems, Russian Academy of Sciences, 142290, Moscow, Russian Federation
| | - Zoya G Fetisova
- Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, 119991, Moscow, Russian Federation
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Yakovlev AG, Shuvalov VA. Femtosecond Relaxation Processes in Rhodobacter sphaeroides Reaction Centers. BIOCHEMISTRY. BIOKHIMIIA 2017; 82:906-915. [PMID: 28941458 DOI: 10.1134/s0006297917080053] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Energy relaxation was studied with difference femtosecond spectroscopy in reaction centers of the YM210L mutant of the purple photosynthetic bacterium Rhodobacter sphaeroides at low temperature (90 K). A dynamical long-wavelength shift of stimulated emission of the excited state of the bacteriochlorophyll dimer P was found, which starts simultaneously with P* formation and is accompanied by a change in the spectral shape of this emission. The characteristic value of this shift was about 30 nm, and the characteristic time about 200 fs. Difference kinetics ΔA measured at fixed wavelengths demonstrate the femtosecond shift of the P* stimulated emission appearing as a dependence of these kinetics on wavelength. We found that the reported long-wavelength shift can be explained in terms of electron-vibrational relaxation of the P* excited state with time constants of vibrational and electronic relaxation of 100 and 50 fs, respectively. Alternative mechanisms of the dynamical shift of the P* stimulated emission spectrum are also discussed in terms of energy redistribution between vibrational modes or coherent excitation of the modes.
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Affiliation(s)
- A G Yakovlev
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119991, Russia.
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